RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SHANK2Q9UPX8 1470 aa14.6□□□□□ -0.07
SNIP1-204ENST00000638725 KDM5DQ9BY66 1539 aa14.59□□□□□ -0.07
SNIP1-204ENST00000638725 RCAN3Q9UKA8 241 aa14.59□□□□□ -0.07
SNIP1-204ENST00000638725 ABCC10Q5T3U5 1492 aa14.58□□□□□ -0.08
SNIP1-204ENST00000638725 CHMP7Q8WUX9 453 aaPredicted RBP14.58□□□□□ -0.08
SNIP1-204ENST00000638725 PLEKHD1A6NEE1 506 aa14.57□□□□□ -0.08
SNIP1-204ENST00000638725 TSPY4P0CV99 314 aa14.57□□□□□ -0.08
SNIP1-204ENST00000638725 TSPY10P0CW01 314 aa14.57□□□□□ -0.08
SNIP1-204ENST00000638725 FBLN2P98095 1184 aa14.56□□□□□ -0.08
SNIP1-204ENST00000638725 NPM2Q86SE8 214 aaKnown RBP14.56□□□□□ -0.08
SNIP1-204ENST00000638725 NLRP13Q86W25 1043 aa14.56□□□□□ -0.08
SNIP1-204ENST00000638725 PTPRGP23470 1445 aa14.56□□□□□ -0.08
SNIP1-204ENST00000638725 CARMIL2Q6F5E8 1435 aa14.56□□□□□ -0.08
SNIP1-204ENST00000638725 HNRNPMP52272 730 aaKnown RBP eCLIP14.56□□□□□ -0.08
SNIP1-204ENST00000638725 PARD3Q8TEW0 1356 aa14.55□□□□□ -0.08
SNIP1-204ENST00000638725 MAGI1Q96QZ7 1491 aaPredicted RBP14.55□□□□□ -0.08
SNIP1-204ENST00000638725 RTL5Q5HYW3 569 aaPredicted RBP14.55□□□□□ -0.08
SNIP1-204ENST00000638725 JPH4Q96JJ6 628 aa14.55□□□□□ -0.08
SNIP1-204ENST00000638725 CDCA7LQ96GN5 454 aa14.54□□□□□ -0.08
SNIP1-204ENST00000638725 TCERG1O14776 1098 aaKnown RBP14.54□□□□□ -0.08
SNIP1-204ENST00000638725 SYNJ2O15056 1496 aa14.53□□□□□ -0.08
SNIP1-204ENST00000638725 ATP10BO94823 1461 aa14.53□□□□□ -0.08
SNIP1-204ENST00000638725 PRAG1Q86YV5 1406 aa14.52□□□□□ -0.08
SNIP1-204ENST00000638725 PDE3BQ13370 1112 aa14.52□□□□□ -0.08
SNIP1-204ENST00000638725 TRPM1Q7Z4N2 1603 aa14.52□□□□□ -0.08
SNIP1-204ENST00000638725 ABCA8O94911 1581 aa14.52□□□□□ -0.08
SNIP1-204ENST00000638725 PDE4AP27815 886 aa14.52□□□□□ -0.09
SNIP1-204ENST00000638725 NBPF1Q3BBV0 1214 aa14.52□□□□□ -0.09
SNIP1-204ENST00000638725 PER1O15534 1290 aaPredicted RBP14.51□□□□□ -0.09
SNIP1-204ENST00000638725 RGL3Q3MIN7 710 aa14.51□□□□□ -0.09
SNIP1-204ENST00000638725 FAM135AQ9P2D6 1515 aa14.51□□□□□ -0.09
SNIP1-204ENST00000638725 CC2D1BQ5T0F9 858 aaKnown RBP14.5□□□□□ -0.09
SNIP1-204ENST00000638725 PLIN1O60240 522 aa14.5□□□□□ -0.09
SNIP1-204ENST00000638725 CCDC144AA2RUR9 1427 aa14.5□□□□□ -0.09
SNIP1-204ENST00000638725 BACH2Q9BYV9 841 aa14.49□□□□□ -0.09
SNIP1-204ENST00000638725 ARHGEF5Q12774 1597 aa14.49□□□□□ -0.09
SNIP1-204ENST00000638725 NUP160Q12769 1436 aa14.49□□□□□ -0.09
SNIP1-204ENST00000638725 DISP3Q9P2K9 1392 aa14.48□□□□□ -0.09
SNIP1-204ENST00000638725 COL17A1Q9UMD9 1497 aaPredicted RBP14.48□□□□□ -0.09
SNIP1-204ENST00000638725 SKAP1Q86WV1 359 aa14.47□□□□□ -0.09
SNIP1-204ENST00000638725 CCDC141Q6ZP82 1450 aa14.46□□□□□ -0.09
SNIP1-204ENST00000638725 LAS1LQ9Y4W2 734 aaKnown RBP14.46□□□□□ -0.09
SNIP1-204ENST00000638725 A2MP01023 1474 aa14.46□□□□□ -0.09
SNIP1-204ENST00000638725 GPRASP1Q5JY77 1395 aa14.46□□□□□ -0.09
SNIP1-204ENST00000638725 MS4A1P11836 297 aa14.46□□□□□ -0.09
SNIP1-204ENST00000638725 SAMD9LQ8IVG5 1584 aa14.46□□□□□ -0.1
SNIP1-204ENST00000638725 TESK2Q96S53 571 aa14.45□□□□□ -0.1
SNIP1-204ENST00000638725 BLMP54132 1417 aaPredicted RBP14.45□□□□□ -0.1
SNIP1-204ENST00000638725 CRBNQ96SW2 442 aa14.45□□□□□ -0.1
SNIP1-204ENST00000638725 PANK3Q9H999 370 aa14.45□□□□□ -0.1
SNIP1-204ENST00000638725 PLA2R1Q13018 1463 aa14.45□□□□□ -0.1
SNIP1-204ENST00000638725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.44□□□□□ -0.1
SNIP1-204ENST00000638725 PRDM15P57071 1507 aaPredicted RBP14.43□□□□□ -0.1
SNIP1-204ENST00000638725 CDC42BPBQ9Y5S2 1711 aa14.42□□□□□ -0.1
SNIP1-204ENST00000638725 WASHC2CQ9Y4E1 1318 aa14.42□□□□□ -0.1
SNIP1-204ENST00000638725 ERBINQ96RT1 1412 aa14.42□□□□□ -0.1
SNIP1-204ENST00000638725 NEFMP07197 916 aa14.41□□□□□ -0.1
SNIP1-204ENST00000638725 LAMC1P11047 1609 aa14.41□□□□□ -0.1
SNIP1-204ENST00000638725 PREX2Q70Z35 1606 aa14.41□□□□□ -0.1
SNIP1-204ENST00000638725 INSRP06213 1382 aa14.4□□□□□ -0.1
SNIP1-204ENST00000638725 ERCC6Q03468 1493 aa14.4□□□□□ -0.1
SNIP1-204ENST00000638725 C20orf194Q5TEA3 1177 aa14.4□□□□□ -0.1
SNIP1-204ENST00000638725 ZMYM4Q5VZL5 1548 aa14.4□□□□□ -0.1
SNIP1-204ENST00000638725 SYCP2Q9BX26 1530 aa14.4□□□□□ -0.1
SNIP1-204ENST00000638725 UNC13BO14795 1591 aa14.39□□□□□ -0.11
SNIP1-204ENST00000638725 MYO5CQ9NQX4 1742 aa14.39□□□□□ -0.11
SNIP1-204ENST00000638725 TMF1P82094 1093 aa14.39□□□□□ -0.11
SNIP1-204ENST00000638725 PLEKHH2Q8IVE3 1493 aa14.38□□□□□ -0.11
SNIP1-204ENST00000638725 ADAMTS8Q9UP79 889 aa14.38□□□□□ -0.11
SNIP1-204ENST00000638725 RSPH4AQ5TD94 716 aa14.38□□□□□ -0.11
SNIP1-204ENST00000638725 EIF2AK4Q9P2K8 1649 aaKnown RBP14.37□□□□□ -0.11
SNIP1-204ENST00000638725 USP35Q9P2H5 1018 aa14.35□□□□□ -0.11
SNIP1-204ENST00000638725 PPM1GO15355 546 aaPredicted RBP14.35□□□□□ -0.11
SNIP1-204ENST00000638725 IQGAP3Q86VI3 1631 aa14.35□□□□□ -0.11
SNIP1-204ENST00000638725 PLEKHH1Q9ULM0 1364 aa14.34□□□□□ -0.11
SNIP1-204ENST00000638725 ARHGAP5Q13017 1502 aa14.34□□□□□ -0.11
SNIP1-204ENST00000638725 MAST1Q9Y2H9 1570 aa14.34□□□□□ -0.11
SNIP1-204ENST00000638725 IL27Q8NEV9 243 aa14.34□□□□□ -0.11
SNIP1-204ENST00000638725 KDM2BQ8NHM5 1336 aa14.34□□□□□ -0.11
SNIP1-204ENST00000638725 MAGI2Q86UL8 1455 aa14.34□□□□□ -0.11
SNIP1-204ENST00000638725 TTC37Q6PGP7 1564 aa14.33□□□□□ -0.12
SNIP1-204ENST00000638725 DDRGK1Q96HY6 314 aa14.33□□□□□ -0.12
SNIP1-204ENST00000638725 DUSP27Q5VZP5 1158 aa14.33□□□□□ -0.12
SNIP1-204ENST00000638725 WDR7Q9Y4E6 1490 aa14.32□□□□□ -0.12
SNIP1-204ENST00000638725 PPP2R1AP30153 589 aa14.32□□□□□ -0.12
SNIP1-204ENST00000638725 RNF17Q9BXT8 1623 aaKnown RBP14.32□□□□□ -0.12
SNIP1-204ENST00000638725 WDR43Q15061 677 aaKnown RBP eCLIP14.32□□□□□ -0.12
SNIP1-204ENST00000638725 KNSTRNQ9Y448 316 aa14.31□□□□□ -0.12
SNIP1-204ENST00000638725 PLXNC1O60486 1568 aa14.3□□□□□ -0.12
SNIP1-204ENST00000638725 SLC4A3P48751 1232 aa14.3□□□□□ -0.12
SNIP1-204ENST00000638725 CENPQQ7L2Z9 268 aaPredicted RBP14.3□□□□□ -0.12
SNIP1-204ENST00000638725 ATP10AO60312 1499 aa14.3□□□□□ -0.12
SNIP1-204ENST00000638725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.3□□□□□ -0.12
SNIP1-204ENST00000638725 ZNF521Q96K83 1311 aa14.29□□□□□ -0.12
SNIP1-204ENST00000638725 AMER1Q5JTC6 1135 aaPredicted RBP14.28□□□□□ -0.12
SNIP1-204ENST00000638725 GOLGA2Q08379 1002 aa14.28□□□□□ -0.12
SNIP1-204ENST00000638725 RTN4Q9NQC3 1192 aaKnown RBP14.28□□□□□ -0.12
SNIP1-204ENST00000638725 DUOX2Q9NRD8 1548 aa14.27□□□□□ -0.12
SNIP1-204ENST00000638725 C8orf34Q49A92 452 aa14.26□□□□□ -0.13
SNIP1-204ENST00000638725 FAM161AQ3B820 660 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms