RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 CCDC144AA2RUR9 1427 aa23.16■■□□□ 1.3
CTSD-213ENST00000637915 INO80Q9ULG1 1556 aaPredicted RBP23.16■■□□□ 1.3
CTSD-213ENST00000637915 KDM5CP41229 1560 aa23.15■■□□□ 1.3
CTSD-213ENST00000637915 CNTLNQ9NXG0 1405 aa23.15■■□□□ 1.3
CTSD-213ENST00000637915 ADGRL1O94910 1474 aa23.14■■□□□ 1.29
CTSD-213ENST00000637915 ATP7AQ04656 1500 aa23.13■■□□□ 1.29
CTSD-213ENST00000637915 USP47Q96K76 1375 aa23.13■■□□□ 1.29
CTSD-213ENST00000637915 ATP10AO60312 1499 aa23.11■■□□□ 1.29
CTSD-213ENST00000637915 SCAPERQ9BY12 1400 aa23.1■■□□□ 1.29
CTSD-213ENST00000637915 NPM1P06748 294 aaKnown RBP eCLIP23.1■■□□□ 1.29
CTSD-213ENST00000637915 DEPDC5O75140 1603 aa23.1■■□□□ 1.29
CTSD-213ENST00000637915 KIF7Q2M1P5 1343 aa23.1■■□□□ 1.29
CTSD-213ENST00000637915 DCAF11Q8TEB1 546 aa23.09■■□□□ 1.29
CTSD-213ENST00000637915 BCORL1Q5H9F3 1711 aa23.09■■□□□ 1.29
CTSD-213ENST00000637915 KDM2AQ9Y2K7 1162 aa23.07■■□□□ 1.28
CTSD-213ENST00000637915 E9PCH4 1651 aa23.05■■□□□ 1.28
CTSD-213ENST00000637915 TRPM1Q7Z4N2 1603 aa23.04■■□□□ 1.28
CTSD-213ENST00000637915 A2MP01023 1474 aa23.04■■□□□ 1.28
CTSD-213ENST00000637915 PRAG1Q86YV5 1406 aa23.03■■□□□ 1.28
CTSD-213ENST00000637915 EIF2AK4Q9P2K8 1649 aaKnown RBP23.02■■□□□ 1.28
CTSD-213ENST00000637915 CARD11Q9BXL7 1154 aa23.02■■□□□ 1.28
CTSD-213ENST00000637915 CFAP74Q9C0B2 1584 aa23.02■■□□□ 1.27
CTSD-213ENST00000637915 KIDINS220Q9ULH0 1771 aa23■■□□□ 1.27
CTSD-213ENST00000637915 VWDEQ8N2E2 1590 aa22.99■■□□□ 1.27
CTSD-213ENST00000637915 TET3O43151 1660 aa22.99■■□□□ 1.27
CTSD-213ENST00000637915 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
CTSD-213ENST00000637915 RGL3Q3MIN7 710 aa22.99■■□□□ 1.27
CTSD-213ENST00000637915 ZNF518AQ6AHZ1 1483 aa22.99■■□□□ 1.27
CTSD-213ENST00000637915 DHX29Q7Z478 1369 aaKnown RBP22.98■■□□□ 1.27
CTSD-213ENST00000637915 TRPM2O94759 1503 aa22.97■■□□□ 1.27
CTSD-213ENST00000637915 ROCK2O75116 1388 aaKnown RBP22.97■■□□□ 1.27
CTSD-213ENST00000637915 ARID4BQ4LE39 1312 aaPredicted RBP22.97■■□□□ 1.27
CTSD-213ENST00000637915 PRDM15P57071 1507 aaPredicted RBP22.97■■□□□ 1.27
CTSD-213ENST00000637915 SPHKAPQ2M3C7 1700 aa22.97■■□□□ 1.27
CTSD-213ENST00000637915 MROH1Q8NDA8 1641 aa22.96■■□□□ 1.27
CTSD-213ENST00000637915 MYT1LQ9UL68 1186 aa22.95■■□□□ 1.26
CTSD-213ENST00000637915 PRKRIP1Q9H875 184 aaPredicted RBP22.94■■□□□ 1.26
CTSD-213ENST00000637915 PTPRTO14522 1441 aa22.93■■□□□ 1.26
CTSD-213ENST00000637915 KANK1Q14678 1352 aa22.93■■□□□ 1.26
CTSD-213ENST00000637915 LAMC1P11047 1609 aa22.93■■□□□ 1.26
CTSD-213ENST00000637915 POGZQ7Z3K3 1410 aa22.92■■□□□ 1.26
CTSD-213ENST00000637915 CEP152O94986 1710 aa22.92■■□□□ 1.26
CTSD-213ENST00000637915 KIF3BO15066 747 aa22.92■■□□□ 1.26
CTSD-213ENST00000637915 GPRASP1Q5JY77 1395 aa22.92■■□□□ 1.26
CTSD-213ENST00000637915 ST20-MTHFSA0A0A6YYL1 179 aa22.9■■□□□ 1.26
CTSD-213ENST00000637915 CLTCL1P53675 1640 aa22.9■■□□□ 1.26
CTSD-213ENST00000637915 HECW2Q9P2P5 1572 aa22.87■■□□□ 1.25
CTSD-213ENST00000637915 MLH3Q9UHC1 1453 aa22.87■■□□□ 1.25
CTSD-213ENST00000637915 NBPF1Q3BBV0 1214 aa22.87■■□□□ 1.25
CTSD-213ENST00000637915 POLR3GLQ9BT43 218 aa22.86■■□□□ 1.25
CTSD-213ENST00000637915 RNF17Q9BXT8 1623 aaKnown RBP22.86■■□□□ 1.25
CTSD-213ENST00000637915 NEO1Q92859 1461 aa22.85■■□□□ 1.25
CTSD-213ENST00000637915 EFCAB6Q5THR3 1501 aa22.84■■□□□ 1.25
CTSD-213ENST00000637915 FRMPD1Q5SYB0 1578 aa22.84■■□□□ 1.25
CTSD-213ENST00000637915 MADDQ8WXG6 1647 aa22.83■■□□□ 1.25
CTSD-213ENST00000637915 CCDC184Q52MB2 194 aa22.83■■□□□ 1.25
CTSD-213ENST00000637915 PPRC1Q5VV67 1664 aaKnown RBP22.82■■□□□ 1.24
CTSD-213ENST00000637915 LMTK2Q8IWU2 1503 aa22.81■■□□□ 1.24
CTSD-213ENST00000637915 ABCA6Q8N139 1617 aa22.8■■□□□ 1.24
CTSD-213ENST00000637915 MAP3K4Q9Y6R4 1608 aa22.8■■□□□ 1.24
CTSD-213ENST00000637915 NEURL4Q96JN8 1562 aa22.8■■□□□ 1.24
CTSD-213ENST00000637915 RIMBP3CA6NJZ7 1639 aa22.78■■□□□ 1.24
CTSD-213ENST00000637915 RIMBP3BA6NNM3 1639 aa22.78■■□□□ 1.24
CTSD-213ENST00000637915 RIMBP3Q9UFD9 1639 aa22.78■■□□□ 1.24
CTSD-213ENST00000637915 MRS2Q9HD23 443 aa22.76■■□□□ 1.23
CTSD-213ENST00000637915 SUPT16HQ9Y5B9 1047 aaKnown RBP22.76■■□□□ 1.23
CTSD-213ENST00000637915 HNRNPUQ00839 825 aaKnown RBP eCLIP22.76■■□□□ 1.23
CTSD-213ENST00000637915 CYB5RLQ6IPT4 315 aa22.76■■□□□ 1.23
CTSD-213ENST00000637915 UGGT1Q9NYU2 1555 aa22.75■■□□□ 1.23
CTSD-213ENST00000637915 COL17A1Q9UMD9 1497 aaPredicted RBP22.75■■□□□ 1.23
CTSD-213ENST00000637915 STAC3Q96MF2 364 aa22.74■■□□□ 1.23
CTSD-213ENST00000637915 GLI2P10070 1586 aa22.74■■□□□ 1.23
CTSD-213ENST00000637915 RICTORQ6R327 1708 aa22.74■■□□□ 1.23
CTSD-213ENST00000637915 IQGAP1P46940 1657 aa22.72■■□□□ 1.23
CTSD-213ENST00000637915 KIF1BO60333 1816 aa22.72■■□□□ 1.23
CTSD-213ENST00000637915 RAPGEF3O95398 923 aa22.72■■□□□ 1.23
CTSD-213ENST00000637915 TESK2Q96S53 571 aa22.72■■□□□ 1.23
CTSD-213ENST00000637915 DIP2CQ9Y2E4 1556 aa22.71■■□□□ 1.23
CTSD-213ENST00000637915 DISP3Q9P2K9 1392 aa22.69■■□□□ 1.22
CTSD-213ENST00000637915 MROH2AA6NES4 1674 aa22.68■■□□□ 1.22
CTSD-213ENST00000637915 IFT172Q9UG01 1749 aa22.68■■□□□ 1.22
CTSD-213ENST00000637915 KIAA1210Q9ULL0 1709 aa22.68■■□□□ 1.22
CTSD-213ENST00000637915 FAM9BQ8IZU0 186 aa22.68■■□□□ 1.22
CTSD-213ENST00000637915 NPATQ14207 1427 aa22.67■■□□□ 1.22
CTSD-213ENST00000637915 ABCC3O15438 1527 aa22.66■■□□□ 1.22
CTSD-213ENST00000637915 MYOM2P54296 1465 aa22.66■■□□□ 1.22
CTSD-213ENST00000637915 CNGB1Q14028 1251 aaPredicted RBP22.65■■□□□ 1.22
CTSD-213ENST00000637915 GGT6Q6P531 493 aa22.65■■□□□ 1.22
CTSD-213ENST00000637915 DIP2BQ9P265 1576 aa22.64■■□□□ 1.21
CTSD-213ENST00000637915 ADGRB3O60242 1522 aa22.64■■□□□ 1.21
CTSD-213ENST00000637915 SCAF11Q99590 1463 aaKnown RBP22.63■■□□□ 1.21
CTSD-213ENST00000637915 CAMSAP1Q5T5Y3 1602 aa22.63■■□□□ 1.21
CTSD-213ENST00000637915 KTN1Q86UP2 1357 aaKnown RBP22.62■■□□□ 1.21
CTSD-213ENST00000637915 TMF1P82094 1093 aa22.61■■□□□ 1.21
CTSD-213ENST00000637915 WASHC2CQ9Y4E1 1318 aa22.6■■□□□ 1.21
CTSD-213ENST00000637915 YEATS2Q9ULM3 1422 aa22.59■■□□□ 1.21
CTSD-213ENST00000637915 NRXN1Q9ULB1 1477 aa22.58■■□□□ 1.21
CTSD-213ENST00000637915 CFAP65Q6ZU64 1925 aaKnown RBP22.58■■□□□ 1.21
CTSD-213ENST00000637915 RALBP1Q15311 655 aa22.58■■□□□ 1.2
CTSD-213ENST00000637915 SIGLEC1Q9BZZ2 1709 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms