RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 DEPDC5O75140 1603 aa26.26■■□□□ 1.79
PTCHD3-202ENST00000622555 BCORL1Q5H9F3 1711 aa26.26■■□□□ 1.79
PTCHD3-202ENST00000622555 REREQ9P2R6 1566 aa26.26■■□□□ 1.79
PTCHD3-202ENST00000622555 KDM5DQ9BY66 1539 aa26.25■■□□□ 1.79
PTCHD3-202ENST00000622555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.25■■□□□ 1.79
PTCHD3-202ENST00000622555 PZPP20742 1482 aa26.23■■□□□ 1.79
PTCHD3-202ENST00000622555 RNF17Q9BXT8 1623 aaKnown RBP26.22■■□□□ 1.79
PTCHD3-202ENST00000622555 MPHOSPH9Q99550 1183 aa26.21■■□□□ 1.79
PTCHD3-202ENST00000622555 IQGAP3Q86VI3 1631 aa26.21■■□□□ 1.79
PTCHD3-202ENST00000622555 SLC4A1APQ9BWU0 796 aaKnown RBP26.2■■□□□ 1.79
PTCHD3-202ENST00000622555 MROH1Q8NDA8 1641 aa26.2■■□□□ 1.78
PTCHD3-202ENST00000622555 FAM135AQ9P2D6 1515 aa26.2■■□□□ 1.78
PTCHD3-202ENST00000622555 PRDM15P57071 1507 aaPredicted RBP26.19■■□□□ 1.78
PTCHD3-202ENST00000622555 SIGLEC1Q9BZZ2 1709 aa26.18■■□□□ 1.78
PTCHD3-202ENST00000622555 AGLP35573 1532 aa26.17■■□□□ 1.78
PTCHD3-202ENST00000622555 KANK1Q14678 1352 aa26.16■■□□□ 1.78
PTCHD3-202ENST00000622555 GGT6Q6P531 493 aa26.14■■□□□ 1.78
PTCHD3-202ENST00000622555 VWDEQ8N2E2 1590 aa26.14■■□□□ 1.77
PTCHD3-202ENST00000622555 CLSPNQ9HAW4 1339 aa26.12■■□□□ 1.77
PTCHD3-202ENST00000622555 CEP152O94986 1710 aa26.1■■□□□ 1.77
PTCHD3-202ENST00000622555 PKD2Q13563 968 aa26.1■■□□□ 1.77
PTCHD3-202ENST00000622555 FOXD1Q16676 465 aa26.08■■□□□ 1.77
PTCHD3-202ENST00000622555 TET3O43151 1660 aa26.08■■□□□ 1.77
PTCHD3-202ENST00000622555 ARID4BQ4LE39 1312 aaPredicted RBP26.07■■□□□ 1.76
PTCHD3-202ENST00000622555 ZC3H13Q5T200 1668 aaKnown RBP26.04■■□□□ 1.76
PTCHD3-202ENST00000622555 ABCC3O15438 1527 aa26.03■■□□□ 1.76
PTCHD3-202ENST00000622555 LMTK2Q8IWU2 1503 aa26.03■■□□□ 1.76
PTCHD3-202ENST00000622555 WASHC2CQ9Y4E1 1318 aa26.03■■□□□ 1.76
PTCHD3-202ENST00000622555 E9PCH4 1651 aa26.03■■□□□ 1.76
PTCHD3-202ENST00000622555 MLECQ14165 292 aa26.02■■□□□ 1.76
PTCHD3-202ENST00000622555 EFCAB6Q5THR3 1501 aa26■■□□□ 1.75
PTCHD3-202ENST00000622555 CAMSAP1Q5T5Y3 1602 aa25.99■■□□□ 1.75
PTCHD3-202ENST00000622555 ANKRD30BQ9BXX2 1392 aa25.99■■□□□ 1.75
PTCHD3-202ENST00000622555 PPP6R1Q9UPN7 881 aa25.98■■□□□ 1.75
PTCHD3-202ENST00000622555 SIN3AQ96ST3 1273 aa25.96■■□□□ 1.75
PTCHD3-202ENST00000622555 CLTCQ00610 1675 aaKnown RBP25.95■■□□□ 1.75
PTCHD3-202ENST00000622555 ZEB1P37275 1124 aaPredicted RBP25.95■■□□□ 1.74
PTCHD3-202ENST00000622555 NEUROD1Q13562 356 aa25.94■■□□□ 1.74
PTCHD3-202ENST00000622555 CFAP65Q6ZU64 1925 aaKnown RBP25.93■■□□□ 1.74
PTCHD3-202ENST00000622555 SPHKAPQ2M3C7 1700 aa25.92■■□□□ 1.74
PTCHD3-202ENST00000622555 ESF1Q9H501 851 aaKnown RBP25.91■■□□□ 1.74
PTCHD3-202ENST00000622555 RPRD2Q5VT52 1461 aaKnown RBP25.9■■□□□ 1.74
PTCHD3-202ENST00000622555 NPATQ14207 1427 aa25.9■■□□□ 1.74
PTCHD3-202ENST00000622555 PLA2R1Q13018 1463 aa25.88■■□□□ 1.73
PTCHD3-202ENST00000622555 ARHGAP31Q2M1Z3 1444 aa25.87■■□□□ 1.73
PTCHD3-202ENST00000622555 FER1L4A9Z1Z3 1794 aa25.87■■□□□ 1.73
PTCHD3-202ENST00000622555 PTPRTO14522 1441 aa25.85■■□□□ 1.73
PTCHD3-202ENST00000622555 TRPM2O94759 1503 aa25.85■■□□□ 1.73
PTCHD3-202ENST00000622555 CCDC144AA2RUR9 1427 aa25.84■■□□□ 1.73
PTCHD3-202ENST00000622555 CNTLNQ9NXG0 1405 aa25.83■■□□□ 1.73
PTCHD3-202ENST00000622555 MROH2AA6NES4 1674 aa25.82■■□□□ 1.72
PTCHD3-202ENST00000622555 PREX1Q8TCU6 1659 aa25.81■■□□□ 1.72
PTCHD3-202ENST00000622555 TONSLQ96HA7 1378 aa25.79■■□□□ 1.72
PTCHD3-202ENST00000622555 CLTCL1P53675 1640 aa25.78■■□□□ 1.72
PTCHD3-202ENST00000622555 ZMYM3Q14202 1370 aa25.78■■□□□ 1.72
PTCHD3-202ENST00000622555 NOS1P29475 1434 aa25.77■■□□□ 1.72
PTCHD3-202ENST00000622555 MADDQ8WXG6 1647 aa25.77■■□□□ 1.72
PTCHD3-202ENST00000622555 ADAMTSL3P82987 1691 aa25.76■■□□□ 1.71
PTCHD3-202ENST00000622555 ERVK-7P63135 1459 aa25.75■■□□□ 1.71
PTCHD3-202ENST00000622555 SYNMO15061 1565 aa25.75■■□□□ 1.71
PTCHD3-202ENST00000622555 UGGT1Q9NYU2 1555 aa25.75■■□□□ 1.71
PTCHD3-202ENST00000622555 TIMELESSQ9UNS1 1208 aa25.74■■□□□ 1.71
PTCHD3-202ENST00000622555 FBXO31Q5XUX0 539 aaPredicted RBP25.74■■□□□ 1.71
PTCHD3-202ENST00000622555 RIMS1Q86UR5 1692 aaKnown RBP25.73■■□□□ 1.71
PTCHD3-202ENST00000622555 C3P01024 1663 aa25.72■■□□□ 1.71
PTCHD3-202ENST00000622555 KIF1BO60333 1816 aa25.72■■□□□ 1.71
PTCHD3-202ENST00000622555 SPATA31D1Q6ZQQ2 1576 aa25.71■■□□□ 1.71
PTCHD3-202ENST00000622555 PIK3C2BO00750 1634 aa25.69■■□□□ 1.7
PTCHD3-202ENST00000622555 L3MBTL2Q969R5 705 aa25.66■■□□□ 1.7
PTCHD3-202ENST00000622555 CEBPAP49715 358 aaPredicted RBP25.65■■□□□ 1.7
PTCHD3-202ENST00000622555 SPATA31E1Q6ZUB1 1445 aa25.64■■□□□ 1.7
PTCHD3-202ENST00000622555 RGL3Q3MIN7 710 aa25.63■■□□□ 1.69
PTCHD3-202ENST00000622555 PLPPR3Q6T4P5 718 aa25.63■■□□□ 1.69
PTCHD3-202ENST00000622555 SLC52A1Q9NWF4 448 aa25.63■■□□□ 1.69
PTCHD3-202ENST00000622555 TNRQ92752 1358 aa25.61■■□□□ 1.69
PTCHD3-202ENST00000622555 NEURL4Q96JN8 1562 aa25.61■■□□□ 1.69
PTCHD3-202ENST00000622555 CHGAP10645 457 aaKnown RBP25.6■■□□□ 1.69
PTCHD3-202ENST00000622555 IDI1Q13907 227 aa25.6■■□□□ 1.69
PTCHD3-202ENST00000622555 PPP1R15AO75807 674 aaPredicted RBP25.6■■□□□ 1.69
PTCHD3-202ENST00000622555 ADGRB3O60242 1522 aa25.6■■□□□ 1.69
PTCHD3-202ENST00000622555 MYO5BQ9ULV0 1848 aa25.57■■□□□ 1.68
PTCHD3-202ENST00000622555 DCAF11Q8TEB1 546 aa25.55■■□□□ 1.68
PTCHD3-202ENST00000622555 TMEM131LA2VDJ0 1609 aa25.55■■□□□ 1.68
PTCHD3-202ENST00000622555 ZNF326Q5BKZ1 582 aaKnown RBP25.53■■□□□ 1.68
PTCHD3-202ENST00000622555 KDM2AQ9Y2K7 1162 aa25.53■■□□□ 1.68
PTCHD3-202ENST00000622555 PTPRMP28827 1452 aa25.52■■□□□ 1.68
PTCHD3-202ENST00000622555 STAG3Q9UJ98 1225 aa25.51■■□□□ 1.68
PTCHD3-202ENST00000622555 IFT172Q9UG01 1749 aa25.5■■□□□ 1.67
PTCHD3-202ENST00000622555 NLRP1Q9C000 1473 aa25.5■■□□□ 1.67
PTCHD3-202ENST00000622555 PPLO60437 1756 aa25.48■■□□□ 1.67
PTCHD3-202ENST00000622555 MYO3AQ8NEV4 1616 aa25.48■■□□□ 1.67
PTCHD3-202ENST00000622555 KDM5AP29375 1690 aaKnown RBP25.46■■□□□ 1.67
PTCHD3-202ENST00000622555 SETD1BQ9UPS6 1966 aaKnown RBP25.46■■□□□ 1.67
PTCHD3-202ENST00000622555 A2ML1A8K2U0 1454 aa25.45■■□□□ 1.67
PTCHD3-202ENST00000622555 UBR1Q8IWV7 1749 aa25.45■■□□□ 1.67
PTCHD3-202ENST00000622555 NBPF8Q3BBV2 869 aa25.45■■□□□ 1.66
PTCHD3-202ENST00000622555 RPGRIP1LQ68CZ1 1315 aa25.45■■□□□ 1.66
PTCHD3-202ENST00000622555 UHRF1BP1Q6BDS2 1440 aa25.45■■□□□ 1.66
PTCHD3-202ENST00000622555 STAC3Q96MF2 364 aa25.43■■□□□ 1.66
PTCHD3-202ENST00000622555 NEXMIFQ5QGS0 1516 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms