RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 DIP2CQ9Y2E4 1556 aa20.78■□□□□ 0.92
CLTCL1-212ENST00000622493 COL17A1Q9UMD9 1497 aaPredicted RBP20.77■□□□□ 0.92
CLTCL1-212ENST00000622493 DEPDC5O75140 1603 aa20.76■□□□□ 0.91
CLTCL1-212ENST00000622493 FAM135AQ9P2D6 1515 aa20.75■□□□□ 0.91
CLTCL1-212ENST00000622493 IQGAP3Q86VI3 1631 aa20.75■□□□□ 0.91
CLTCL1-212ENST00000622493 BCORL1Q5H9F3 1711 aa20.74■□□□□ 0.91
CLTCL1-212ENST00000622493 KIF3BO15066 747 aa20.74■□□□□ 0.91
CLTCL1-212ENST00000622493 YEATS2Q9ULM3 1422 aa20.73■□□□□ 0.91
CLTCL1-212ENST00000622493 ATP10AO60312 1499 aa20.71■□□□□ 0.91
CLTCL1-212ENST00000622493 PKD2Q13563 968 aa20.71■□□□□ 0.91
CLTCL1-212ENST00000622493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.71■□□□□ 0.91
CLTCL1-212ENST00000622493 PRDM15P57071 1507 aaPredicted RBP20.71■□□□□ 0.91
CLTCL1-212ENST00000622493 KANK1Q14678 1352 aa20.71■□□□□ 0.91
CLTCL1-212ENST00000622493 TIMELESSQ9UNS1 1208 aa20.7■□□□□ 0.9
CLTCL1-212ENST00000622493 REREQ9P2R6 1566 aa20.7■□□□□ 0.9
CLTCL1-212ENST00000622493 RNF17Q9BXT8 1623 aaKnown RBP20.7■□□□□ 0.9
CLTCL1-212ENST00000622493 ANKRD30BQ9BXX2 1392 aa20.69■□□□□ 0.9
CLTCL1-212ENST00000622493 VWDEQ8N2E2 1590 aa20.68■□□□□ 0.9
CLTCL1-212ENST00000622493 SIN3AQ96ST3 1273 aa20.67■□□□□ 0.9
CLTCL1-212ENST00000622493 MROH1Q8NDA8 1641 aa20.67■□□□□ 0.9
CLTCL1-212ENST00000622493 ARHGEF40Q8TER5 1519 aa20.66■□□□□ 0.9
CLTCL1-212ENST00000622493 FOXD1Q16676 465 aa20.66■□□□□ 0.9
CLTCL1-212ENST00000622493 AGLP35573 1532 aa20.64■□□□□ 0.89
CLTCL1-212ENST00000622493 NEUROD1Q13562 356 aa20.64■□□□□ 0.89
CLTCL1-212ENST00000622493 LMTK2Q8IWU2 1503 aa20.62■□□□□ 0.89
CLTCL1-212ENST00000622493 TET3O43151 1660 aa20.62■□□□□ 0.89
CLTCL1-212ENST00000622493 GGT6Q6P531 493 aa20.6■□□□□ 0.89
CLTCL1-212ENST00000622493 RPRD2Q5VT52 1461 aaKnown RBP20.59■□□□□ 0.89
CLTCL1-212ENST00000622493 TONSLQ96HA7 1378 aa20.58■□□□□ 0.88
CLTCL1-212ENST00000622493 PPP6R1Q9UPN7 881 aa20.57■□□□□ 0.88
CLTCL1-212ENST00000622493 E9PCH4 1651 aa20.56■□□□□ 0.88
CLTCL1-212ENST00000622493 ZC3H13Q5T200 1668 aaKnown RBP20.55■□□□□ 0.88
CLTCL1-212ENST00000622493 WASHC2CQ9Y4E1 1318 aa20.55■□□□□ 0.88
CLTCL1-212ENST00000622493 EFCAB6Q5THR3 1501 aa20.55■□□□□ 0.88
CLTCL1-212ENST00000622493 ABCC3O15438 1527 aa20.53■□□□□ 0.88
CLTCL1-212ENST00000622493 CEP152O94986 1710 aa20.53■□□□□ 0.88
CLTCL1-212ENST00000622493 PLA2R1Q13018 1463 aa20.52■□□□□ 0.87
CLTCL1-212ENST00000622493 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
CLTCL1-212ENST00000622493 PTPRTO14522 1441 aa20.51■□□□□ 0.87
CLTCL1-212ENST00000622493 SIGLEC1Q9BZZ2 1709 aa20.5■□□□□ 0.87
CLTCL1-212ENST00000622493 PPP1R15AO75807 674 aaPredicted RBP20.48■□□□□ 0.87
CLTCL1-212ENST00000622493 ARHGAP31Q2M1Z3 1444 aa20.48■□□□□ 0.87
CLTCL1-212ENST00000622493 SPHKAPQ2M3C7 1700 aa20.48■□□□□ 0.87
CLTCL1-212ENST00000622493 TRPM2O94759 1503 aa20.48■□□□□ 0.87
CLTCL1-212ENST00000622493 CAMSAP1Q5T5Y3 1602 aa20.48■□□□□ 0.87
CLTCL1-212ENST00000622493 NPATQ14207 1427 aa20.46■□□□□ 0.87
CLTCL1-212ENST00000622493 L3MBTL2Q969R5 705 aa20.44■□□□□ 0.86
CLTCL1-212ENST00000622493 ARID4BQ4LE39 1312 aaPredicted RBP20.43■□□□□ 0.86
CLTCL1-212ENST00000622493 CNTLNQ9NXG0 1405 aa20.42■□□□□ 0.86
CLTCL1-212ENST00000622493 NOS1P29475 1434 aa20.39■□□□□ 0.85
CLTCL1-212ENST00000622493 MLECQ14165 292 aa20.39■□□□□ 0.85
CLTCL1-212ENST00000622493 ESF1Q9H501 851 aaKnown RBP20.39■□□□□ 0.85
CLTCL1-212ENST00000622493 NEURL4Q96JN8 1562 aa20.37■□□□□ 0.85
CLTCL1-212ENST00000622493 CLTCQ00610 1675 aaKnown RBP20.37■□□□□ 0.85
CLTCL1-212ENST00000622493 CLTCL1P53675 1640 aa20.37■□□□□ 0.85
CLTCL1-212ENST00000622493 SPATA31E1Q6ZUB1 1445 aa20.34■□□□□ 0.85
CLTCL1-212ENST00000622493 CFAP65Q6ZU64 1925 aaKnown RBP20.34■□□□□ 0.85
CLTCL1-212ENST00000622493 PREX1Q8TCU6 1659 aa20.32■□□□□ 0.84
CLTCL1-212ENST00000622493 STAC3Q96MF2 364 aa20.32■□□□□ 0.84
CLTCL1-212ENST00000622493 KIF1BO60333 1816 aa20.31■□□□□ 0.84
CLTCL1-212ENST00000622493 SLC52A1Q9NWF4 448 aa20.31■□□□□ 0.84
CLTCL1-212ENST00000622493 ZMYM3Q14202 1370 aa20.31■□□□□ 0.84
CLTCL1-212ENST00000622493 MROH2AA6NES4 1674 aa20.31■□□□□ 0.84
CLTCL1-212ENST00000622493 PIK3C2BO00750 1634 aa20.3■□□□□ 0.84
CLTCL1-212ENST00000622493 UHRF1BP1Q6BDS2 1440 aa20.3■□□□□ 0.84
CLTCL1-212ENST00000622493 SYNMO15061 1565 aa20.3■□□□□ 0.84
CLTCL1-212ENST00000622493 RGL3Q3MIN7 710 aa20.3■□□□□ 0.84
CLTCL1-212ENST00000622493 DCAF11Q8TEB1 546 aa20.3■□□□□ 0.84
CLTCL1-212ENST00000622493 UGGT1Q9NYU2 1555 aa20.3■□□□□ 0.84
CLTCL1-212ENST00000622493 ERVK-7P63135 1459 aa20.29■□□□□ 0.84
CLTCL1-212ENST00000622493 SPATA31D1Q6ZQQ2 1576 aa20.28■□□□□ 0.84
CLTCL1-212ENST00000622493 NBPF8Q3BBV2 869 aa20.25■□□□□ 0.83
CLTCL1-212ENST00000622493 ADGRB3O60242 1522 aa20.25■□□□□ 0.83
CLTCL1-212ENST00000622493 FBXO31Q5XUX0 539 aaPredicted RBP20.24■□□□□ 0.83
CLTCL1-212ENST00000622493 FER1L4A9Z1Z3 1794 aa20.24■□□□□ 0.83
CLTCL1-212ENST00000622493 KDM2AQ9Y2K7 1162 aa20.24■□□□□ 0.83
CLTCL1-212ENST00000622493 ZNF316A6NFI3 1004 aaPredicted RBP20.23■□□□□ 0.83
CLTCL1-212ENST00000622493 IDI1Q13907 227 aa20.22■□□□□ 0.83
CLTCL1-212ENST00000622493 PRAG1Q86YV5 1406 aa20.21■□□□□ 0.83
CLTCL1-212ENST00000622493 RPGRIP1LQ68CZ1 1315 aa20.21■□□□□ 0.83
CLTCL1-212ENST00000622493 CHGAP10645 457 aaKnown RBP20.19■□□□□ 0.82
CLTCL1-212ENST00000622493 ZNF326Q5BKZ1 582 aaKnown RBP20.19■□□□□ 0.82
CLTCL1-212ENST00000622493 MYOM2P54296 1465 aa20.18■□□□□ 0.82
CLTCL1-212ENST00000622493 RALGAPBQ86X10 1494 aa20.18■□□□□ 0.82
CLTCL1-212ENST00000622493 IFT172Q9UG01 1749 aa20.17■□□□□ 0.82
CLTCL1-212ENST00000622493 C3P01024 1663 aa20.16■□□□□ 0.82
CLTCL1-212ENST00000622493 TMEM131LA2VDJ0 1609 aa20.16■□□□□ 0.82
CLTCL1-212ENST00000622493 ADAMTSL3P82987 1691 aa20.16■□□□□ 0.82
CLTCL1-212ENST00000622493 TNRQ92752 1358 aa20.16■□□□□ 0.82
CLTCL1-212ENST00000622493 MADDQ8WXG6 1647 aa20.14■□□□□ 0.81
CLTCL1-212ENST00000622493 TRPM1Q7Z4N2 1603 aa20.14■□□□□ 0.81
CLTCL1-212ENST00000622493 PPLO60437 1756 aa20.13■□□□□ 0.81
CLTCL1-212ENST00000622493 EIF4G2P78344 907 aaKnown RBP eCLIP20.13■□□□□ 0.81
CLTCL1-212ENST00000622493 STAG3Q9UJ98 1225 aa20.12■□□□□ 0.81
CLTCL1-212ENST00000622493 KDM5AP29375 1690 aaKnown RBP20.11■□□□□ 0.81
CLTCL1-212ENST00000622493 NLRP1Q9C000 1473 aa20.11■□□□□ 0.81
CLTCL1-212ENST00000622493 NRXN1Q9ULB1 1477 aa20.11■□□□□ 0.81
CLTCL1-212ENST00000622493 VGFO15240 615 aaPredicted RBP20.1■□□□□ 0.81
CLTCL1-212ENST00000622493 CEBPAP49715 358 aaPredicted RBP20.1■□□□□ 0.81
CLTCL1-212ENST00000622493 RIMS1Q86UR5 1692 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms