RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 MIER1Q8N108 512 aa39.5■■■■□ 3.91
FMR1-219ENST00000621453 DHX29Q7Z478 1369 aaKnown RBP39.49■■■■□ 3.91
FMR1-219ENST00000621453 HIRIP3Q9BW71 556 aaPredicted RBP39.47■■■■□ 3.91
FMR1-219ENST00000621453 NBPF8Q3BBV2 869 aa39.45■■■■□ 3.91
FMR1-219ENST00000621453 MLH3Q9UHC1 1453 aa39.44■■■■□ 3.9
FMR1-219ENST00000621453 HECW2Q9P2P5 1572 aa39.43■■■■□ 3.9
FMR1-219ENST00000621453 DIP2BQ9P265 1576 aa39.42■■■■□ 3.9
FMR1-219ENST00000621453 CCDC144AA2RUR9 1427 aa39.41■■■■□ 3.9
FMR1-219ENST00000621453 PLA2R1Q13018 1463 aa39.41■■■■□ 3.9
FMR1-219ENST00000621453 ATP10AO60312 1499 aa39.38■■■■□ 3.9
FMR1-219ENST00000621453 KIF3BO15066 747 aa39.37■■■■□ 3.89
FMR1-219ENST00000621453 VWDEQ8N2E2 1590 aa39.36■■■■□ 3.89
FMR1-219ENST00000621453 A2MP01023 1474 aa39.35■■■■□ 3.89
FMR1-219ENST00000621453 E9PCH4 1651 aa39.35■■■■□ 3.89
FMR1-219ENST00000621453 PRDM15P57071 1507 aaPredicted RBP39.35■■■■□ 3.89
FMR1-219ENST00000621453 KANK1Q14678 1352 aa39.34■■■■□ 3.89
FMR1-219ENST00000621453 EIF4G2P78344 907 aaKnown RBP eCLIP39.33■■■■□ 3.89
FMR1-219ENST00000621453 TET3O43151 1660 aa39.33■■■■□ 3.89
FMR1-219ENST00000621453 FAM69CQ0P6D2 419 aa39.32■■■■□ 3.89
FMR1-219ENST00000621453 MROH1Q8NDA8 1641 aa39.32■■■■□ 3.89
FMR1-219ENST00000621453 HSPA5P11021 654 aaKnown RBP39.32■■■■□ 3.88
FMR1-219ENST00000621453 RICTORQ6R327 1708 aa39.31■■■■□ 3.88
FMR1-219ENST00000621453 UHRF1BP1Q6BDS2 1440 aa39.3■■■■□ 3.88
FMR1-219ENST00000621453 ABCA6Q8N139 1617 aa39.28■■■■□ 3.88
FMR1-219ENST00000621453 RAPGEF3O95398 923 aa39.27■■■■□ 3.88
FMR1-219ENST00000621453 DDX10Q13206 875 aaKnown RBP39.26■■■■□ 3.88
FMR1-219ENST00000621453 FRMPD1Q5SYB0 1578 aa39.25■■■■□ 3.87
FMR1-219ENST00000621453 RNF17Q9BXT8 1623 aaKnown RBP39.25■■■■□ 3.87
FMR1-219ENST00000621453 SPHKAPQ2M3C7 1700 aa39.21■■■■□ 3.87
FMR1-219ENST00000621453 ZNF326Q5BKZ1 582 aaKnown RBP39.21■■■■□ 3.87
FMR1-219ENST00000621453 BCORL1Q5H9F3 1711 aa39.2■■■■□ 3.87
FMR1-219ENST00000621453 DCAF11Q8TEB1 546 aa39.2■■■■□ 3.87
FMR1-219ENST00000621453 TSPOAP1O95153 1857 aa39.18■■■■□ 3.86
FMR1-219ENST00000621453 PPRC1Q5VV67 1664 aaKnown RBP39.18■■■■□ 3.86
FMR1-219ENST00000621453 TRPM2O94759 1503 aa39.18■■■■□ 3.86
FMR1-219ENST00000621453 RALGAPBQ86X10 1494 aa39.17■■■■□ 3.86
FMR1-219ENST00000621453 PTPRTO14522 1441 aa39.16■■■■□ 3.86
FMR1-219ENST00000621453 DIP2CQ9Y2E4 1556 aa39.16■■■■□ 3.86
FMR1-219ENST00000621453 SPATA31E1Q6ZUB1 1445 aa39.15■■■■□ 3.86
FMR1-219ENST00000621453 KDM2AQ9Y2K7 1162 aa39.14■■■■□ 3.86
FMR1-219ENST00000621453 LMTK2Q8IWU2 1503 aa39.13■■■■□ 3.85
FMR1-219ENST00000621453 EFCAB6Q5THR3 1501 aa39.11■■■■□ 3.85
FMR1-219ENST00000621453 CEP152O94986 1710 aa39.1■■■■□ 3.85
FMR1-219ENST00000621453 RGL3Q3MIN7 710 aa39.09■■■■□ 3.85
FMR1-219ENST00000621453 KIF13AQ9H1H9 1805 aa39.07■■■■□ 3.84
FMR1-219ENST00000621453 ZMYM4Q5VZL5 1548 aa39.05■■■■□ 3.84
FMR1-219ENST00000621453 CLTCL1P53675 1640 aa39.05■■■■□ 3.84
FMR1-219ENST00000621453 WASHC2AQ641Q2 1341 aa39.04■■■■□ 3.84
FMR1-219ENST00000621453 PRAG1Q86YV5 1406 aa39.04■■■■□ 3.84
FMR1-219ENST00000621453 USP47Q96K76 1375 aa39.02■■■■□ 3.84
FMR1-219ENST00000621453 YEATS2Q9ULM3 1422 aa39.01■■■■□ 3.84
FMR1-219ENST00000621453 POLR1AO95602 1720 aaPredicted RBP39.01■■■■□ 3.83
FMR1-219ENST00000621453 TRPM1Q7Z4N2 1603 aa39■■■■□ 3.83
FMR1-219ENST00000621453 GGT6Q6P531 493 aa39■■■■□ 3.83
FMR1-219ENST00000621453 CARD11Q9BXL7 1154 aa38.96■■■■□ 3.83
FMR1-219ENST00000621453 CCDC7Q96M83 1385 aa38.93■■■■□ 3.82
FMR1-219ENST00000621453 C11orf95C9JLR9 678 aaPredicted RBP38.92■■■■□ 3.82
FMR1-219ENST00000621453 ABCC3O15438 1527 aa38.92■■■■□ 3.82
FMR1-219ENST00000621453 ROCK2O75116 1388 aaKnown RBP38.92■■■■□ 3.82
FMR1-219ENST00000621453 NEURL4Q96JN8 1562 aa38.91■■■■□ 3.82
FMR1-219ENST00000621453 WASHC2CQ9Y4E1 1318 aa38.87■■■■□ 3.81
FMR1-219ENST00000621453 YTHDC1Q96MU7 727 aaKnown RBP38.87■■■■□ 3.81
FMR1-219ENST00000621453 NPATQ14207 1427 aa38.87■■■■□ 3.81
FMR1-219ENST00000621453 CENPBP07199 599 aaPredicted RBP38.86■■■■□ 3.81
FMR1-219ENST00000621453 CAMSAP1Q5T5Y3 1602 aa38.86■■■■□ 3.81
FMR1-219ENST00000621453 KIF1BO60333 1816 aa38.86■■■■□ 3.81
FMR1-219ENST00000621453 UGGT1Q9NYU2 1555 aa38.84■■■■□ 3.81
FMR1-219ENST00000621453 ZC3H13Q5T200 1668 aaKnown RBP38.84■■■■□ 3.81
FMR1-219ENST00000621453 ANP32CO43423 234 aa38.83■■■■□ 3.81
FMR1-219ENST00000621453 LAMC1P11047 1609 aa38.83■■■■□ 3.81
FMR1-219ENST00000621453 GPRASP1Q5JY77 1395 aa38.82■■■■□ 3.81
FMR1-219ENST00000621453 KIF7Q2M1P5 1343 aa38.82■■■■□ 3.81
FMR1-219ENST00000621453 STAC3Q96MF2 364 aa38.81■■■■□ 3.8
FMR1-219ENST00000621453 MADDQ8WXG6 1647 aa38.79■■■■□ 3.8
FMR1-219ENST00000621453 CNTLNQ9NXG0 1405 aa38.79■■■■□ 3.8
FMR1-219ENST00000621453 CFAP65Q6ZU64 1925 aaKnown RBP38.79■■■■□ 3.8
FMR1-219ENST00000621453 REREQ9P2R6 1566 aa38.78■■■■□ 3.8
FMR1-219ENST00000621453 NBPF1Q3BBV0 1214 aa38.76■■■■□ 3.8
FMR1-219ENST00000621453 ARID4BQ4LE39 1312 aaPredicted RBP38.72■■■■□ 3.79
FMR1-219ENST00000621453 ST20-MTHFSA0A0A6YYL1 179 aa38.71■■■■□ 3.79
FMR1-219ENST00000621453 COL17A1Q9UMD9 1497 aaPredicted RBP38.71■■■■□ 3.79
FMR1-219ENST00000621453 MROH2AA6NES4 1674 aa38.71■■■■□ 3.79
FMR1-219ENST00000621453 ARHGAP31Q2M1Z3 1444 aa38.71■■■■□ 3.79
FMR1-219ENST00000621453 SIGLEC1Q9BZZ2 1709 aa38.7■■■■□ 3.79
FMR1-219ENST00000621453 AGLP35573 1532 aa38.68■■■■□ 3.78
FMR1-219ENST00000621453 NOS1P29475 1434 aa38.68■■■■□ 3.78
FMR1-219ENST00000621453 ADGRB3O60242 1522 aa38.67■■■■□ 3.78
FMR1-219ENST00000621453 IFT172Q9UG01 1749 aa38.67■■■■□ 3.78
FMR1-219ENST00000621453 CCER2I3L3R5 266 aa38.66■■■■□ 3.78
FMR1-219ENST00000621453 MYOM2P54296 1465 aa38.64■■■■□ 3.78
FMR1-219ENST00000621453 ARHGEF40Q8TER5 1519 aa38.63■■■■□ 3.77
FMR1-219ENST00000621453 KIAA1210Q9ULL0 1709 aa38.6■■■■□ 3.77
FMR1-219ENST00000621453 SYNMO15061 1565 aa38.59■■■■□ 3.77
FMR1-219ENST00000621453 PIK3C2BO00750 1634 aa38.59■■■■□ 3.77
FMR1-219ENST00000621453 CHGAP10645 457 aaKnown RBP38.54■■■■□ 3.76
FMR1-219ENST00000621453 IQGAP1P46940 1657 aa38.53■■■■□ 3.76
FMR1-219ENST00000621453 POLR3GLQ9BT43 218 aa38.53■■■■□ 3.76
FMR1-219ENST00000621453 PPP6R1Q9UPN7 881 aa38.52■■■■□ 3.76
FMR1-219ENST00000621453 PREX1Q8TCU6 1659 aa38.52■■■■□ 3.76
FMR1-219ENST00000621453 PPLO60437 1756 aa38.51■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms