RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 HSPA2P54652 639 aa32.17■■■□□ 2.74
SGMS1-210ENST00000619438 DNMT1P26358 1616 aaKnown RBP32.17■■■□□ 2.74
SGMS1-210ENST00000619438 SETD1BQ9UPS6 1966 aaKnown RBP32.16■■■□□ 2.74
SGMS1-210ENST00000619438 ZMYM3Q14202 1370 aa32.16■■■□□ 2.74
SGMS1-210ENST00000619438 KIF15Q9NS87 1388 aa32.15■■■□□ 2.74
SGMS1-210ENST00000619438 ANKRD30AQ9BXX3 1397 aa32.14■■■□□ 2.74
SGMS1-210ENST00000619438 CCER1Q8TC90 406 aaPredicted RBP32.14■■■□□ 2.74
SGMS1-210ENST00000619438 WASHC2CQ9Y4E1 1318 aa32.13■■■□□ 2.73
SGMS1-210ENST00000619438 ITGAEP38570 1179 aa32.1■■■□□ 2.73
SGMS1-210ENST00000619438 DUOX2Q9NRD8 1548 aa32.09■■■□□ 2.73
SGMS1-210ENST00000619438 UHRF1BP1Q6BDS2 1440 aa32.07■■■□□ 2.72
SGMS1-210ENST00000619438 NCOA1Q15788 1441 aa32.05■■■□□ 2.72
SGMS1-210ENST00000619438 EIF2AK4Q9P2K8 1649 aaKnown RBP32.02■■■□□ 2.72
SGMS1-210ENST00000619438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.01■■■□□ 2.712e-6■■■□□ 15
SGMS1-210ENST00000619438 NPATQ14207 1427 aa32■■■□□ 2.71
SGMS1-210ENST00000619438 KDM5DQ9BY66 1539 aa32■■■□□ 2.71
SGMS1-210ENST00000619438 ERBINQ96RT1 1412 aa32■■■□□ 2.71
SGMS1-210ENST00000619438 RNF17Q9BXT8 1623 aaKnown RBP31.99■■■□□ 2.71
SGMS1-210ENST00000619438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.98■■■□□ 2.711e-7■□□□□ 9.5
SGMS1-210ENST00000619438 PTPRKQ15262 1439 aa31.96■■■□□ 2.71
SGMS1-210ENST00000619438 RRBP1Q9P2E9 1410 aaKnown RBP31.96■■■□□ 2.71
SGMS1-210ENST00000619438 ADGRL2O95490 1459 aa31.96■■■□□ 2.71
SGMS1-210ENST00000619438 FAM135AQ9P2D6 1515 aa31.95■■■□□ 2.7
SGMS1-210ENST00000619438 FBXO31Q5XUX0 539 aaPredicted RBP31.92■■■□□ 2.7
SGMS1-210ENST00000619438 MROH1Q8NDA8 1641 aa31.92■■■□□ 2.7
SGMS1-210ENST00000619438 MYO3AQ8NEV4 1616 aa31.91■■■□□ 2.7
SGMS1-210ENST00000619438 KANK1Q14678 1352 aa31.9■■■□□ 2.7
SGMS1-210ENST00000619438 STRCQ7RTU9 1775 aa31.89■■■□□ 2.7
SGMS1-210ENST00000619438 ANKRD50Q9ULJ7 1429 aa31.89■■■□□ 2.7
SGMS1-210ENST00000619438 ZC3H13Q5T200 1668 aaKnown RBP31.88■■■□□ 2.69
SGMS1-210ENST00000619438 CEP152O94986 1710 aa31.87■■■□□ 2.69
SGMS1-210ENST00000619438 ROCK1Q13464 1354 aa31.87■■■□□ 2.69
SGMS1-210ENST00000619438 ABCC3O15438 1527 aa31.87■■■□□ 2.69
SGMS1-210ENST00000619438 PZPP20742 1482 aa31.86■■■□□ 2.69
SGMS1-210ENST00000619438 ZNF142P52746 1687 aaPredicted RBP31.84■■■□□ 2.69
SGMS1-210ENST00000619438 CEP170BQ9Y4F5 1589 aaPredicted RBP31.81■■■□□ 2.68
SGMS1-210ENST00000619438 TNRQ92752 1358 aa31.8■■■□□ 2.68
SGMS1-210ENST00000619438 DEPDC5O75140 1603 aa31.8■■■□□ 2.68
SGMS1-210ENST00000619438 PRDM15P57071 1507 aaPredicted RBP31.8■■■□□ 2.68
SGMS1-210ENST00000619438 CAMSAP1Q5T5Y3 1602 aa31.79■■■□□ 2.68
SGMS1-210ENST00000619438 CFAP65Q6ZU64 1925 aaKnown RBP31.79■■■□□ 2.68
SGMS1-210ENST00000619438 DMRT2Q9Y5R5 561 aa31.73■■■□□ 2.67
SGMS1-210ENST00000619438 A2ML1A8K2U0 1454 aa31.72■■■□□ 2.67
SGMS1-210ENST00000619438 SPATA31D1Q6ZQQ2 1576 aa31.68■■■□□ 2.66
SGMS1-210ENST00000619438 ARHGAP31Q2M1Z3 1444 aa31.68■■■□□ 2.66
SGMS1-210ENST00000619438 ERVK-7P63135 1459 aa31.66■■■□□ 2.66
SGMS1-210ENST00000619438 THEMISQ8N1K5 641 aaPredicted RBP31.64■■■□□ 2.66
SGMS1-210ENST00000619438 NCKAP5LQ9HCH0 1330 aa31.64■■■□□ 2.66
SGMS1-210ENST00000619438 VWDEQ8N2E2 1590 aa31.64■■■□□ 2.66
SGMS1-210ENST00000619438 PLA2R1Q13018 1463 aa31.63■■■□□ 2.65
SGMS1-210ENST00000619438 NLRP1Q9C000 1473 aa31.63■■■□□ 2.65
SGMS1-210ENST00000619438 LMTK2Q8IWU2 1503 aa31.62■■■□□ 2.65
SGMS1-210ENST00000619438 PTPRTO14522 1441 aa31.62■■■□□ 2.65
SGMS1-210ENST00000619438 NUP155O75694 1391 aa31.62■■■□□ 2.65
SGMS1-210ENST00000619438 ILDR1Q86SU0 546 aaPredicted RBP31.62■■■□□ 2.65
SGMS1-210ENST00000619438 CLSPNQ9HAW4 1339 aa31.59■■■□□ 2.65
SGMS1-210ENST00000619438 UGGT1Q9NYU2 1555 aa31.59■■■□□ 2.65
SGMS1-210ENST00000619438 PKD2Q13563 968 aa31.58■■■□□ 2.65
SGMS1-210ENST00000619438 NAIPQ13075 1403 aa31.57■■■□□ 2.64
SGMS1-210ENST00000619438 STAG3Q9UJ98 1225 aa31.55■■■□□ 2.64
SGMS1-210ENST00000619438 POLR1AO95602 1720 aaPredicted RBP31.55■■■□□ 2.64
SGMS1-210ENST00000619438 UNC13BO14795 1591 aa31.54■■■□□ 2.64
SGMS1-210ENST00000619438 EFCAB6Q5THR3 1501 aa31.53■■■□□ 2.64
SGMS1-210ENST00000619438 ANKLE2Q86XL3 938 aa31.52■■■□□ 2.64
SGMS1-210ENST00000619438 TRIM52Q96A61 297 aa31.51■■■□□ 2.64
SGMS1-210ENST00000619438 HFM1A2PYH4 1435 aa31.51■■■□□ 2.63
SGMS1-210ENST00000619438 IDI1Q13907 227 aa31.5■■■□□ 2.63
SGMS1-210ENST00000619438 UBR1Q8IWV7 1749 aa31.5■■■□□ 2.63
SGMS1-210ENST00000619438 CERKQ8TCT0 537 aa31.48■■■□□ 2.63
SGMS1-210ENST00000619438 RPRD2Q5VT52 1461 aaKnown RBP31.48■■■□□ 2.63
SGMS1-210ENST00000619438 SLC52A1Q9NWF4 448 aa31.48■■■□□ 2.63
SGMS1-210ENST00000619438 TET3O43151 1660 aa31.47■■■□□ 2.63
SGMS1-210ENST00000619438 DHX57Q6P158 1386 aaKnown RBP31.46■■■□□ 2.63
SGMS1-210ENST00000619438 NEURL4Q96JN8 1562 aa31.46■■■□□ 2.63
SGMS1-210ENST00000619438 PIK3C2BO00750 1634 aa31.44■■■□□ 2.62
SGMS1-210ENST00000619438 NOS1P29475 1434 aa31.44■■■□□ 2.62
SGMS1-210ENST00000619438 GCC2Q8IWJ2 1684 aa31.44■■■□□ 2.62
SGMS1-210ENST00000619438 SYNMO15061 1565 aa31.44■■■□□ 2.62
SGMS1-210ENST00000619438 FBXO41Q8TF61 875 aa31.44■■■□□ 2.62
SGMS1-210ENST00000619438 IQGAP3Q86VI3 1631 aa31.43■■■□□ 2.62
SGMS1-210ENST00000619438 LTBP4Q8N2S1 1624 aa31.4■■■□□ 2.62
SGMS1-210ENST00000619438 ZNF335Q9H4Z2 1342 aaPredicted RBP31.38■■■□□ 2.61
SGMS1-210ENST00000619438 EID1Q9Y6B2 187 aa31.38■■■□□ 2.61
SGMS1-210ENST00000619438 E9PCH4 1651 aa31.38■■■□□ 2.61
SGMS1-210ENST00000619438 TXNDC2Q86VQ3 553 aa31.37■■■□□ 2.61
SGMS1-210ENST00000619438 CHGAP10645 457 aaKnown RBP31.36■■■□□ 2.61
SGMS1-210ENST00000619438 SLC4A1APQ9BWU0 796 aaKnown RBP31.35■■■□□ 2.61
SGMS1-210ENST00000619438 MED14O60244 1454 aa31.33■■■□□ 2.61
SGMS1-210ENST00000619438 KDM5AP29375 1690 aaKnown RBP31.32■■■□□ 2.6
SGMS1-210ENST00000619438 IQGAP1P46940 1657 aa31.32■■■□□ 2.6
SGMS1-210ENST00000619438 NPHP4O75161 1426 aaPredicted RBP31.32■■■□□ 2.6
SGMS1-210ENST00000619438 LTKP29376 864 aa31.31■■■□□ 2.6
SGMS1-210ENST00000619438 SLIT1O75093 1534 aa31.3■■■□□ 2.6
SGMS1-210ENST00000619438 TMEM2Q9UHN6 1383 aa31.3■■■□□ 2.6
SGMS1-210ENST00000619438 ARHGAP23Q9P227 1491 aa31.29■■■□□ 2.6
SGMS1-210ENST00000619438 SETD5Q9C0A6 1442 aa31.27■■■□□ 2.6
SGMS1-210ENST00000619438 SCAF11Q99590 1463 aaKnown RBP31.27■■■□□ 2.6
SGMS1-210ENST00000619438 ADGRB3O60242 1522 aa31.26■■■□□ 2.59
SGMS1-210ENST00000619438 MYO5BQ9ULV0 1848 aa31.26■■■□□ 2.59
SGMS1-210ENST00000619438 RAB3GAP2Q9H2M9 1393 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms