RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 PLPPR3Q6T4P5 718 aa26.01■■□□□ 1.75
SBDS-205ENST00000617799 RNF17Q9BXT8 1623 aaKnown RBP25.99■■□□□ 1.75
SBDS-205ENST00000617799 CLTCQ00610 1675 aaKnown RBP25.97■■□□□ 1.75
SBDS-205ENST00000617799 CNTLNQ9NXG0 1405 aa25.97■■□□□ 1.75
SBDS-205ENST00000617799 ANKRD50Q9ULJ7 1429 aa25.95■■□□□ 1.74
SBDS-205ENST00000617799 PPP6R1Q9UPN7 881 aa25.93■■□□□ 1.74
SBDS-205ENST00000617799 KDM5DQ9BY66 1539 aa25.93■■□□□ 1.74
SBDS-205ENST00000617799 MROH2AA6NES4 1674 aa25.91■■□□□ 1.74
SBDS-205ENST00000617799 WASHC2CQ9Y4E1 1318 aa25.9■■□□□ 1.74
SBDS-205ENST00000617799 FAM135AQ9P2D6 1515 aa25.9■■□□□ 1.74
SBDS-205ENST00000617799 MROH1Q8NDA8 1641 aa25.9■■□□□ 1.74
SBDS-205ENST00000617799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.9■■□□□ 1.74
SBDS-205ENST00000617799 C3P01024 1663 aa25.9■■□□□ 1.74
SBDS-205ENST00000617799 PRDM15P57071 1507 aaPredicted RBP25.88■■□□□ 1.73
SBDS-205ENST00000617799 DEPDC5O75140 1603 aa25.88■■□□□ 1.73
SBDS-205ENST00000617799 ZC3H13Q5T200 1668 aaKnown RBP25.87■■□□□ 1.73
SBDS-205ENST00000617799 GCC2Q8IWJ2 1684 aa25.87■■□□□ 1.73
SBDS-205ENST00000617799 CEBPAP49715 358 aaPredicted RBP25.87■■□□□ 1.73
SBDS-205ENST00000617799 KANK1Q14678 1352 aa25.86■■□□□ 1.73
SBDS-205ENST00000617799 ABCC3O15438 1527 aa25.85■■□□□ 1.73
SBDS-205ENST00000617799 CEP152O94986 1710 aa25.85■■□□□ 1.73
SBDS-205ENST00000617799 ZMYM3Q14202 1370 aa25.84■■□□□ 1.73
SBDS-205ENST00000617799 NAIPQ13075 1403 aa25.82■■□□□ 1.72
SBDS-205ENST00000617799 HFM1A2PYH4 1435 aa25.81■■□□□ 1.72
SBDS-205ENST00000617799 UNC13BO14795 1591 aa25.8■■□□□ 1.72
SBDS-205ENST00000617799 CAMSAP1Q5T5Y3 1602 aa25.8■■□□□ 1.72
SBDS-205ENST00000617799 VWDEQ8N2E2 1590 aa25.74■■□□□ 1.71
SBDS-205ENST00000617799 PZPP20742 1482 aa25.74■■□□□ 1.71
SBDS-205ENST00000617799 NPATQ14207 1427 aa25.73■■□□□ 1.71
SBDS-205ENST00000617799 PREX1Q8TCU6 1659 aa25.73■■□□□ 1.71
SBDS-205ENST00000617799 NUP155O75694 1391 aa25.71■■□□□ 1.71
SBDS-205ENST00000617799 LMTK2Q8IWU2 1503 aa25.71■■□□□ 1.71
SBDS-205ENST00000617799 IQGAP3Q86VI3 1631 aa25.7■■□□□ 1.7
SBDS-205ENST00000617799 EFCAB6Q5THR3 1501 aa25.68■■□□□ 1.7
SBDS-205ENST00000617799 FBXO31Q5XUX0 539 aaPredicted RBP25.68■■□□□ 1.7
SBDS-205ENST00000617799 UHRF1BP1Q6BDS2 1440 aa25.68■■□□□ 1.7
SBDS-205ENST00000617799 TET3O43151 1660 aa25.68■■□□□ 1.7
SBDS-205ENST00000617799 TRIM26Q12899 539 aaPredicted RBP25.66■■□□□ 1.7
SBDS-205ENST00000617799 TRIM52Q96A61 297 aa25.66■■□□□ 1.7
SBDS-205ENST00000617799 ARHGAP31Q2M1Z3 1444 aa25.65■■□□□ 1.7
SBDS-205ENST00000617799 MYO3AQ8NEV4 1616 aa25.65■■□□□ 1.7
SBDS-205ENST00000617799 SETD1BQ9UPS6 1966 aaKnown RBP25.65■■□□□ 1.7
SBDS-205ENST00000617799 TNRQ92752 1358 aa25.65■■□□□ 1.7
SBDS-205ENST00000617799 LMTK3Q96Q04 1460 aa25.65■■□□□ 1.7
SBDS-205ENST00000617799 SETD5Q9C0A6 1442 aa25.64■■□□□ 1.7
SBDS-205ENST00000617799 CFAP65Q6ZU64 1925 aaKnown RBP25.64■■□□□ 1.69
SBDS-205ENST00000617799 ERVK-7P63135 1459 aa25.64■■□□□ 1.69
SBDS-205ENST00000617799 SPATA31D1Q6ZQQ2 1576 aa25.61■■□□□ 1.69
SBDS-205ENST00000617799 RPRD2Q5VT52 1461 aaKnown RBP25.58■■□□□ 1.69
SBDS-205ENST00000617799 ACIN1Q9UKV3 1341 aaKnown RBP25.58■■□□□ 1.69
SBDS-205ENST00000617799 E9PCH4 1651 aa25.58■■□□□ 1.68
SBDS-205ENST00000617799 CEP170BQ9Y4F5 1589 aaPredicted RBP25.57■■□□□ 1.68
SBDS-205ENST00000617799 RAB3GAP2Q9H2M9 1393 aa25.56■■□□□ 1.68
SBDS-205ENST00000617799 ZNF142P52746 1687 aaPredicted RBP25.56■■□□□ 1.68
SBDS-205ENST00000617799 HSPA2P54652 639 aa25.55■■□□□ 1.68
SBDS-205ENST00000617799 NLRP1Q9C000 1473 aa25.54■■□□□ 1.68
SBDS-205ENST00000617799 A2ML1A8K2U0 1454 aa25.53■■□□□ 1.68
SBDS-205ENST00000617799 SLC4A1APQ9BWU0 796 aaKnown RBP25.51■■□□□ 1.67
SBDS-205ENST00000617799 SYNMO15061 1565 aa25.5■■□□□ 1.67
SBDS-205ENST00000617799 NOS1P29475 1434 aa25.49■■□□□ 1.67
SBDS-205ENST00000617799 UGGT1Q9NYU2 1555 aa25.46■■□□□ 1.67
SBDS-205ENST00000617799 SPHKAPQ2M3C7 1700 aa25.46■■□□□ 1.67
SBDS-205ENST00000617799 PKD2Q13563 968 aa25.45■■□□□ 1.66
SBDS-205ENST00000617799 PIK3C2BO00750 1634 aa25.44■■□□□ 1.66
SBDS-205ENST00000617799 STAG3Q9UJ98 1225 aa25.43■■□□□ 1.66
SBDS-205ENST00000617799 MPHOSPH9Q99550 1183 aa25.42■■□□□ 1.66
SBDS-205ENST00000617799 UBR1Q8IWV7 1749 aa25.4■■□□□ 1.66
SBDS-205ENST00000617799 SLC52A1Q9NWF4 448 aa25.4■■□□□ 1.66
SBDS-205ENST00000617799 IDI1Q13907 227 aa25.39■■□□□ 1.66
SBDS-205ENST00000617799 THEMISQ8N1K5 641 aaPredicted RBP25.39■■□□□ 1.66
SBDS-205ENST00000617799 HRCP23327 699 aa25.38■■□□□ 1.65
SBDS-205ENST00000617799 ADGRB3O60242 1522 aa25.37■■□□□ 1.65
SBDS-205ENST00000617799 PLA2R1Q13018 1463 aa25.36■■□□□ 1.65
SBDS-205ENST00000617799 FOXD1Q16676 465 aa25.36■■□□□ 1.65
SBDS-205ENST00000617799 TRPM2O94759 1503 aa25.36■■□□□ 1.65
SBDS-205ENST00000617799 PTPRTO14522 1441 aa25.36■■□□□ 1.65
SBDS-205ENST00000617799 CHGAP10645 457 aaKnown RBP25.35■■□□□ 1.65
SBDS-205ENST00000617799 KDM5AP29375 1690 aaKnown RBP25.34■■□□□ 1.65
SBDS-205ENST00000617799 STRCQ7RTU9 1775 aa25.33■■□□□ 1.65
SBDS-205ENST00000617799 POLR1AO95602 1720 aaPredicted RBP25.32■■□□□ 1.64
SBDS-205ENST00000617799 CLTCL1P53675 1640 aa25.31■■□□□ 1.64
SBDS-205ENST00000617799 NCKAP5LQ9HCH0 1330 aa25.31■■□□□ 1.64
SBDS-205ENST00000617799 MYO5BQ9ULV0 1848 aa25.29■■□□□ 1.64
SBDS-205ENST00000617799 TMEM131LA2VDJ0 1609 aa25.29■■□□□ 1.64
SBDS-205ENST00000617799 ANKLE2Q86XL3 938 aa25.28■■□□□ 1.64
SBDS-205ENST00000617799 DMRT2Q9Y5R5 561 aa25.26■■□□□ 1.63
SBDS-205ENST00000617799 TMEM2Q9UHN6 1383 aa25.25■■□□□ 1.63
SBDS-205ENST00000617799 SLIT1O75093 1534 aa25.25■■□□□ 1.63
SBDS-205ENST00000617799 KIF1BO60333 1816 aa25.25■■□□□ 1.63
SBDS-205ENST00000617799 ARHGAP23Q9P227 1491 aa25.24■■□□□ 1.63
SBDS-205ENST00000617799 CCDC144AA2RUR9 1427 aa25.24■■□□□ 1.63
SBDS-205ENST00000617799 EID1Q9Y6B2 187 aa25.24■■□□□ 1.63
SBDS-205ENST00000617799 SCAF11Q99590 1463 aaKnown RBP25.23■■□□□ 1.63
SBDS-205ENST00000617799 PCGF6Q9BYE7 350 aa25.23■■□□□ 1.63
SBDS-205ENST00000617799 NEURL4Q96JN8 1562 aa25.22■■□□□ 1.63
SBDS-205ENST00000617799 TXNDC2Q86VQ3 553 aa25.21■■□□□ 1.63
SBDS-205ENST00000617799 ZNF326Q5BKZ1 582 aaKnown RBP25.2■■□□□ 1.62
SBDS-205ENST00000617799 RIMS2Q9UQ26 1411 aa25.19■■□□□ 1.62
SBDS-205ENST00000617799 PPP1R15AO75807 674 aaPredicted RBP25.18■■□□□ 1.62
SBDS-205ENST00000617799 NPHP4O75161 1426 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms