RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 NISCHQ9Y2I1 1504 aa41.16■■■■■ 4.18
SBDS-205ENST00000617799 CCDC180Q9P1Z9 1646 aa36.54■■■■□ 3.44
SBDS-205ENST00000617799 ABCC9O60706 1549 aa35.57■■■■□ 3.28
SBDS-205ENST00000617799 DCAF8L2P0C7V8 631 aa34.4■■■■□ 3.1
SBDS-205ENST00000617799 ZCCHC6Q5VYS8 1495 aaKnown RBP34.34■■■■□ 3.09
SBDS-205ENST00000617799 RB1CC1Q8TDY2 1594 aa34.3■■■■□ 3.08
SBDS-205ENST00000617799 NACADO15069 1562 aa34.28■■■■□ 3.08
SBDS-205ENST00000617799 MYO15BQ96JP2 1530 aa34.07■■■■□ 3.04
SBDS-205ENST00000617799 DCAF1Q9Y4B6 1507 aa34.03■■■■□ 3.04
SBDS-205ENST00000617799 UNC13AQ9UPW8 1703 aa33.51■■■□□ 2.96
SBDS-205ENST00000617799 SCRIBQ14160 1630 aa33.41■■■□□ 2.94
SBDS-205ENST00000617799 PABPN1Q86U42 306 aaKnown RBP eCLIP33.24■■■□□ 2.91
SBDS-205ENST00000617799 BICRAQ9NZM4 1560 aa33.19■■■□□ 2.9
SBDS-205ENST00000617799 SHROOM4Q9ULL8 1493 aa32.86■■■□□ 2.85
SBDS-205ENST00000617799 DNAJC5BQ9UF47 199 aa32.54■■■□□ 2.8
SBDS-205ENST00000617799 EIF4G1Q04637 1599 aaKnown RBP32.33■■■□□ 2.77
SBDS-205ENST00000617799 CC2D2AQ9P2K1 1620 aa32.16■■■□□ 2.74
SBDS-205ENST00000617799 CECR2Q9BXF3 1484 aa32.03■■■□□ 2.72
SBDS-205ENST00000617799 SMARCA4P51532 1647 aa31.93■■■□□ 2.7
SBDS-205ENST00000617799 BAZ1AQ9NRL2 1556 aaPredicted RBP31.92■■■□□ 2.7
SBDS-205ENST00000617799 MROH2BQ7Z745 1585 aa31.73■■■□□ 2.67
SBDS-205ENST00000617799 SMARCA2P51531 1590 aa31.67■■■□□ 2.66
SBDS-205ENST00000617799 ATAD2BQ9ULI0 1458 aa31.66■■■□□ 2.66
SBDS-205ENST00000617799 NCAPD3P42695 1498 aa31.58■■■□□ 2.65
SBDS-205ENST00000617799 PEG3Q9GZU2 1588 aa31.56■■■□□ 2.64
SBDS-205ENST00000617799 HMGXB3Q12766 1538 aa31.49■■■□□ 2.63
SBDS-205ENST00000617799 BAZ1BQ9UIG0 1483 aaKnown RBP31.47■■■□□ 2.63
SBDS-205ENST00000617799 WIZO95785 1651 aa31.44■■■□□ 2.62
SBDS-205ENST00000617799 RSF1Q96T23 1441 aaPredicted RBP31.43■■■□□ 2.62
SBDS-205ENST00000617799 TOP2AP11388 1531 aaKnown RBP31.11■■■□□ 2.57
SBDS-205ENST00000617799 SUPT5HO00267 1087 aaKnown RBP30.9■■■□□ 2.54
SBDS-205ENST00000617799 NESP48681 1621 aa30.81■■■□□ 2.52
SBDS-205ENST00000617799 LAMC3Q9Y6N6 1575 aa30.77■■■□□ 2.52
SBDS-205ENST00000617799 CCDC88BA6NC98 1476 aa30.72■■■□□ 2.51
SBDS-205ENST00000617799 CADPSQ9ULU8 1353 aa30.69■■■□□ 2.5
SBDS-205ENST00000617799 ERCC6Q03468 1493 aa30.68■■■□□ 2.5
SBDS-205ENST00000617799 PDS5BQ9NTI5 1447 aa30.56■■■□□ 2.48
SBDS-205ENST00000617799 CFTRP13569 1480 aa30.55■■■□□ 2.48
SBDS-205ENST00000617799 KIF21AQ7Z4S6 1674 aa30.49■■■□□ 2.47
SBDS-205ENST00000617799 PRDM2Q13029 1718 aa30.43■■■□□ 2.46
SBDS-205ENST00000617799 FANCD2Q9BXW9 1451 aa30.39■■■□□ 2.46
SBDS-205ENST00000617799 CEP164Q9UPV0 1460 aa30.35■■■□□ 2.45
SBDS-205ENST00000617799 THOC2Q8NI27 1593 aaKnown RBP30.3■■■□□ 2.44
SBDS-205ENST00000617799 MRC2Q9UBG0 1479 aa30.25■■■□□ 2.43
SBDS-205ENST00000617799 CUX2O14529 1486 aa30.19■■■□□ 2.42
SBDS-205ENST00000617799 WDR62O43379 1518 aa30.12■■■□□ 2.41
SBDS-205ENST00000617799 URB2Q14146 1524 aaKnown RBP30.05■■■□□ 2.4
SBDS-205ENST00000617799 ABCC8Q09428 1581 aa29.92■■■□□ 2.38
SBDS-205ENST00000617799 DNMBPQ6XZF7 1577 aa29.92■■■□□ 2.38
SBDS-205ENST00000617799 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
SBDS-205ENST00000617799 CUX1P39880 1505 aa29.78■■■□□ 2.36
SBDS-205ENST00000617799 WRNQ14191 1432 aaPredicted RBP eCLIP29.68■■■□□ 2.34
SBDS-205ENST00000617799 POLA1P09884 1462 aaPredicted RBP29.67■■■□□ 2.34
SBDS-205ENST00000617799 IFT140Q96RY7 1462 aa29.67■■■□□ 2.34
SBDS-205ENST00000617799 FGD5Q6ZNL6 1462 aa29.66■■■□□ 2.34
SBDS-205ENST00000617799 SYNJ1O43426 1573 aa29.6■■■□□ 2.33
SBDS-205ENST00000617799 BIVM-ERCC5R4GMW8 1640 aa29.59■■■□□ 2.33
SBDS-205ENST00000617799 TOP2BQ02880 1626 aa29.58■■■□□ 2.33
SBDS-205ENST00000617799 SOGA1O94964 1423 aa29.56■■■□□ 2.32
SBDS-205ENST00000617799 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
SBDS-205ENST00000617799 RAD54L2Q9Y4B4 1467 aa29.55■■■□□ 2.32
SBDS-205ENST00000617799 ZNF608Q9ULD9 1512 aaPredicted RBP29.51■■■□□ 2.32
SBDS-205ENST00000617799 EIF4G3O43432 1585 aaKnown RBP29.46■■■□□ 2.31
SBDS-205ENST00000617799 WDR97A6NE52 1622 aa29.39■■■□□ 2.3
SBDS-205ENST00000617799 TDRD9Q8NDG6 1382 aaKnown RBP29.38■■■□□ 2.29
SBDS-205ENST00000617799 AQRO60306 1485 aaKnown RBP eCLIP29.37■■■□□ 2.297e-7■■□□□ 14.1
SBDS-205ENST00000617799 DNAJC5Q9H3Z4 198 aa29.34■■■□□ 2.29
SBDS-205ENST00000617799 ABCA10Q8WWZ4 1543 aa29.34■■■□□ 2.29
SBDS-205ENST00000617799 ABCA5Q8WWZ7 1642 aa29.23■■■□□ 2.27
SBDS-205ENST00000617799 GAPVD1Q14C86 1478 aa29.23■■■□□ 2.27
SBDS-205ENST00000617799 PBRM1Q86U86 1689 aa29.21■■■□□ 2.27
SBDS-205ENST00000617799 GRIN2BQ13224 1484 aa29.19■■■□□ 2.26
SBDS-205ENST00000617799 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
SBDS-205ENST00000617799 SNAPC4Q5SXM2 1469 aa29.15■■■□□ 2.26
SBDS-205ENST00000617799 MAGI1Q96QZ7 1491 aaPredicted RBP29.09■■■□□ 2.25
SBDS-205ENST00000617799 FBLN2P98095 1184 aa29.06■■■□□ 2.24
SBDS-205ENST00000617799 CHD1O14646 1710 aa29.06■■■□□ 2.24
SBDS-205ENST00000617799 KIF27Q86VH2 1401 aa29.05■■■□□ 2.24
SBDS-205ENST00000617799 ERICH3Q5RHP9 1530 aa29.01■■■□□ 2.23
SBDS-205ENST00000617799 SYNJ2O15056 1496 aa28.98■■■□□ 2.23
SBDS-205ENST00000617799 OSCARQ8IYS5 282 aa28.97■■■□□ 2.23
SBDS-205ENST00000617799 ADAMTS12P58397 1594 aa28.96■■■□□ 2.23
SBDS-205ENST00000617799 CHMP7Q8WUX9 453 aaPredicted RBP28.96■■■□□ 2.23
SBDS-205ENST00000617799 FHAD1B1AJZ9 1412 aa28.89■■■□□ 2.22
SBDS-205ENST00000617799 CHIC1Q5VXU3 224 aa28.89■■■□□ 2.22
SBDS-205ENST00000617799 IGF1RP08069 1367 aa28.84■■■□□ 2.21
SBDS-205ENST00000617799 CUL7Q14999 1698 aa28.83■■■□□ 2.21
SBDS-205ENST00000617799 GRIN2AQ12879 1464 aa28.83■■■□□ 2.21
SBDS-205ENST00000617799 RUSC2Q8N2Y8 1516 aa28.83■■■□□ 2.21
SBDS-205ENST00000617799 CARMIL1Q5VZK9 1371 aa28.71■■■□□ 2.19
SBDS-205ENST00000617799 CLASP1Q7Z460 1538 aa28.69■■■□□ 2.18
SBDS-205ENST00000617799 CEP170Q5SW79 1584 aa28.67■■■□□ 2.18
SBDS-205ENST00000617799 NUP160Q12769 1436 aa28.64■■■□□ 2.18
SBDS-205ENST00000617799 EEA1Q15075 1411 aa28.62■■■□□ 2.17
SBDS-205ENST00000617799 FAM9AQ8IZU1 332 aaPredicted RBP28.59■■■□□ 2.17
SBDS-205ENST00000617799 RAPGEF2Q9Y4G8 1499 aa28.59■■■□□ 2.17
SBDS-205ENST00000617799 CSRNP3Q8WYN3 585 aa28.54■■■□□ 2.16
SBDS-205ENST00000617799 ARHGEF11O15085 1522 aa28.53■■■□□ 2.16
SBDS-205ENST00000617799 RIMBP3CA6NJZ7 1639 aa28.52■■■□□ 2.16
SBDS-205ENST00000617799 RIMBP3BA6NNM3 1639 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms