RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
PCDHGC3-205ENST00000617641 CCDC144AA2RUR9 1427 aa24.43■■□□□ 1.5
PCDHGC3-205ENST00000617641 CFAP74Q9C0B2 1584 aa24.43■■□□□ 1.5
PCDHGC3-205ENST00000617641 ZNF518AQ6AHZ1 1483 aa24.4■■□□□ 1.5
PCDHGC3-205ENST00000617641 UHRF1BP1Q6BDS2 1440 aa24.4■■□□□ 1.5
PCDHGC3-205ENST00000617641 WASHC2AQ641Q2 1341 aa24.39■■□□□ 1.49
PCDHGC3-205ENST00000617641 DEPDC5O75140 1603 aa24.39■■□□□ 1.49
PCDHGC3-205ENST00000617641 KIDINS220Q9ULH0 1771 aa24.39■■□□□ 1.49
PCDHGC3-205ENST00000617641 SPATA31E1Q6ZUB1 1445 aa24.38■■□□□ 1.49
PCDHGC3-205ENST00000617641 KDM2AQ9Y2K7 1162 aa24.36■■□□□ 1.49
PCDHGC3-205ENST00000617641 DHX29Q7Z478 1369 aaKnown RBP24.36■■□□□ 1.49
PCDHGC3-205ENST00000617641 DCAF11Q8TEB1 546 aa24.35■■□□□ 1.49
PCDHGC3-205ENST00000617641 POGZQ7Z3K3 1410 aa24.35■■□□□ 1.49
PCDHGC3-205ENST00000617641 ATP10AO60312 1499 aa24.34■■□□□ 1.49
PCDHGC3-205ENST00000617641 E9PCH4 1651 aa24.34■■□□□ 1.49
PCDHGC3-205ENST00000617641 KIF3BO15066 747 aa24.33■■□□□ 1.49
PCDHGC3-205ENST00000617641 EIF2AK4Q9P2K8 1649 aaKnown RBP24.33■■□□□ 1.49
PCDHGC3-205ENST00000617641 KDM5CP41229 1560 aa24.33■■□□□ 1.48
PCDHGC3-205ENST00000617641 RALGAPBQ86X10 1494 aa24.33■■□□□ 1.48
PCDHGC3-205ENST00000617641 C11orf95C9JLR9 678 aaPredicted RBP24.33■■□□□ 1.48
PCDHGC3-205ENST00000617641 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
PCDHGC3-205ENST00000617641 RGL3Q3MIN7 710 aa24.3■■□□□ 1.48
PCDHGC3-205ENST00000617641 VWDEQ8N2E2 1590 aa24.3■■□□□ 1.48
PCDHGC3-205ENST00000617641 NEO1Q92859 1461 aa24.29■■□□□ 1.48
PCDHGC3-205ENST00000617641 USP47Q96K76 1375 aa24.29■■□□□ 1.48
PCDHGC3-205ENST00000617641 ANP32CO43423 234 aa24.29■■□□□ 1.48
PCDHGC3-205ENST00000617641 KANK1Q14678 1352 aa24.29■■□□□ 1.48
PCDHGC3-205ENST00000617641 CCDC7Q96M83 1385 aa24.29■■□□□ 1.48
PCDHGC3-205ENST00000617641 MROH1Q8NDA8 1641 aa24.28■■□□□ 1.48
PCDHGC3-205ENST00000617641 TET3O43151 1660 aa24.28■■□□□ 1.48
PCDHGC3-205ENST00000617641 PRDM15P57071 1507 aaPredicted RBP24.28■■□□□ 1.48
PCDHGC3-205ENST00000617641 MAP3K4Q9Y6R4 1608 aa24.28■■□□□ 1.48
PCDHGC3-205ENST00000617641 A2MP01023 1474 aa24.27■■□□□ 1.48
PCDHGC3-205ENST00000617641 HECW2Q9P2P5 1572 aa24.27■■□□□ 1.48
PCDHGC3-205ENST00000617641 MLH3Q9UHC1 1453 aa24.26■■□□□ 1.47
PCDHGC3-205ENST00000617641 POLR1AO95602 1720 aaPredicted RBP24.24■■□□□ 1.47
PCDHGC3-205ENST00000617641 SPHKAPQ2M3C7 1700 aa24.23■■□□□ 1.47
PCDHGC3-205ENST00000617641 PRAG1Q86YV5 1406 aa24.23■■□□□ 1.47
PCDHGC3-205ENST00000617641 CARD11Q9BXL7 1154 aa24.23■■□□□ 1.47
PCDHGC3-205ENST00000617641 TRPM2O94759 1503 aa24.23■■□□□ 1.47
PCDHGC3-205ENST00000617641 RAPGEF3O95398 923 aa24.22■■□□□ 1.47
PCDHGC3-205ENST00000617641 KIF7Q2M1P5 1343 aa24.22■■□□□ 1.47
PCDHGC3-205ENST00000617641 GLI2P10070 1586 aa24.22■■□□□ 1.47
PCDHGC3-205ENST00000617641 FRMPD1Q5SYB0 1578 aa24.21■■□□□ 1.47
PCDHGC3-205ENST00000617641 PTPRTO14522 1441 aa24.21■■□□□ 1.47
PCDHGC3-205ENST00000617641 CNTLNQ9NXG0 1405 aa24.21■■□□□ 1.47
PCDHGC3-205ENST00000617641 BCORL1Q5H9F3 1711 aa24.21■■□□□ 1.47
PCDHGC3-205ENST00000617641 TRPM1Q7Z4N2 1603 aa24.2■■□□□ 1.47
PCDHGC3-205ENST00000617641 ABCA6Q8N139 1617 aa24.2■■□□□ 1.47
PCDHGC3-205ENST00000617641 RNF17Q9BXT8 1623 aaKnown RBP24.19■■□□□ 1.46
PCDHGC3-205ENST00000617641 ROCK2O75116 1388 aaKnown RBP24.18■■□□□ 1.46
PCDHGC3-205ENST00000617641 CLTCL1P53675 1640 aa24.18■■□□□ 1.46
PCDHGC3-205ENST00000617641 CCER2I3L3R5 266 aa24.17■■□□□ 1.46
PCDHGC3-205ENST00000617641 DIP2BQ9P265 1576 aa24.16■■□□□ 1.46
PCDHGC3-205ENST00000617641 RICTORQ6R327 1708 aa24.16■■□□□ 1.46
PCDHGC3-205ENST00000617641 CEP152O94986 1710 aa24.15■■□□□ 1.46
PCDHGC3-205ENST00000617641 FAM69CQ0P6D2 419 aa24.15■■□□□ 1.46
PCDHGC3-205ENST00000617641 EFCAB6Q5THR3 1501 aa24.15■■□□□ 1.46
PCDHGC3-205ENST00000617641 PPRC1Q5VV67 1664 aaKnown RBP24.14■■□□□ 1.45
PCDHGC3-205ENST00000617641 NBPF1Q3BBV0 1214 aa24.12■■□□□ 1.45
PCDHGC3-205ENST00000617641 LMTK2Q8IWU2 1503 aa24.12■■□□□ 1.45
PCDHGC3-205ENST00000617641 DIP2CQ9Y2E4 1556 aa24.11■■□□□ 1.45
PCDHGC3-205ENST00000617641 GTF3C3Q9Y5Q9 886 aa24.11■■□□□ 1.45
PCDHGC3-205ENST00000617641 ST20-MTHFSA0A0A6YYL1 179 aa24.1■■□□□ 1.45
PCDHGC3-205ENST00000617641 GGT6Q6P531 493 aa24.1■■□□□ 1.45
PCDHGC3-205ENST00000617641 GPRASP1Q5JY77 1395 aa24.08■■□□□ 1.45
PCDHGC3-205ENST00000617641 UGGT1Q9NYU2 1555 aa24.07■■□□□ 1.44
PCDHGC3-205ENST00000617641 POLR3GLQ9BT43 218 aa24.07■■□□□ 1.44
PCDHGC3-205ENST00000617641 TSPOAP1O95153 1857 aa24.07■■□□□ 1.44
PCDHGC3-205ENST00000617641 LAMC1P11047 1609 aa24.05■■□□□ 1.44
PCDHGC3-205ENST00000617641 YEATS2Q9ULM3 1422 aa24.05■■□□□ 1.44
PCDHGC3-205ENST00000617641 ARID4BQ4LE39 1312 aaPredicted RBP24.05■■□□□ 1.44
PCDHGC3-205ENST00000617641 MADDQ8WXG6 1647 aa24.04■■□□□ 1.44
PCDHGC3-205ENST00000617641 ABCC3O15438 1527 aa24.02■■□□□ 1.44
PCDHGC3-205ENST00000617641 NPATQ14207 1427 aa24.01■■□□□ 1.43
PCDHGC3-205ENST00000617641 WASHC2CQ9Y4E1 1318 aa24■■□□□ 1.43
PCDHGC3-205ENST00000617641 NEURL4Q96JN8 1562 aa23.99■■□□□ 1.43
PCDHGC3-205ENST00000617641 KIF1BO60333 1816 aa23.99■■□□□ 1.43
PCDHGC3-205ENST00000617641 PRKRIP1Q9H875 184 aaPredicted RBP23.99■■□□□ 1.43
PCDHGC3-205ENST00000617641 ZMYM4Q5VZL5 1548 aa23.97■■□□□ 1.43
PCDHGC3-205ENST00000617641 CFAP65Q6ZU64 1925 aaKnown RBP23.97■■□□□ 1.43
PCDHGC3-205ENST00000617641 CAMSAP1Q5T5Y3 1602 aa23.96■■□□□ 1.43
PCDHGC3-205ENST00000617641 MROH2AA6NES4 1674 aa23.96■■□□□ 1.43
PCDHGC3-205ENST00000617641 STAC3Q96MF2 364 aa23.96■■□□□ 1.43
PCDHGC3-205ENST00000617641 KIF13AQ9H1H9 1805 aa23.91■■□□□ 1.42
PCDHGC3-205ENST00000617641 SIGLEC1Q9BZZ2 1709 aa23.9■■□□□ 1.42
PCDHGC3-205ENST00000617641 ADGRB3O60242 1522 aa23.9■■□□□ 1.42
PCDHGC3-205ENST00000617641 MYT1Q01538 1121 aa23.9■■□□□ 1.42
PCDHGC3-205ENST00000617641 CCDC184Q52MB2 194 aa23.9■■□□□ 1.42
PCDHGC3-205ENST00000617641 TESK2Q96S53 571 aa23.9■■□□□ 1.42
PCDHGC3-205ENST00000617641 IFT172Q9UG01 1749 aa23.9■■□□□ 1.42
PCDHGC3-205ENST00000617641 MYOM2P54296 1465 aa23.89■■□□□ 1.42
PCDHGC3-205ENST00000617641 IQGAP1P46940 1657 aa23.89■■□□□ 1.41
PCDHGC3-205ENST00000617641 COL17A1Q9UMD9 1497 aaPredicted RBP23.88■■□□□ 1.41
PCDHGC3-205ENST00000617641 ZC3H13Q5T200 1668 aaKnown RBP23.88■■□□□ 1.41
PCDHGC3-205ENST00000617641 CHGAP10645 457 aaKnown RBP23.88■■□□□ 1.41
PCDHGC3-205ENST00000617641 ADGRF5Q8IZF2 1346 aa23.87■■□□□ 1.41
PCDHGC3-205ENST00000617641 DISP3Q9P2K9 1392 aa23.86■■□□□ 1.41
PCDHGC3-205ENST00000617641 NOS1P29475 1434 aa23.86■■□□□ 1.41
PCDHGC3-205ENST00000617641 KIAA1210Q9ULL0 1709 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms