RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 ROCK2O75116 1388 aaKnown RBP15.97■□□□□ 0.15
C11orf54-215ENST00000617482 RGL3Q3MIN7 710 aa15.96■□□□□ 0.15
C11orf54-215ENST00000617482 PTPRGP23470 1445 aa15.96■□□□□ 0.15
C11orf54-215ENST00000617482 KCNA4P22459 653 aa15.95■□□□□ 0.14
C11orf54-215ENST00000617482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.14
C11orf54-215ENST00000617482 BCL11AQ9H165 835 aa15.94■□□□□ 0.14
C11orf54-215ENST00000617482 ARHGEF12Q9NZN5 1544 aa15.93■□□□□ 0.14
C11orf54-215ENST00000617482 KDM5DQ9BY66 1539 aa15.92■□□□□ 0.14
C11orf54-215ENST00000617482 NBPF1Q3BBV0 1214 aa15.91■□□□□ 0.14
C11orf54-215ENST00000617482 MYBBP1AQ9BQG0 1328 aaKnown RBP15.9■□□□□ 0.14
C11orf54-215ENST00000617482 CHD1O14646 1710 aa15.9■□□□□ 0.14
C11orf54-215ENST00000617482 RALBP1Q15311 655 aa15.89■□□□□ 0.13
C11orf54-215ENST00000617482 CCDC136Q96JN2 1154 aa15.89■□□□□ 0.13
C11orf54-215ENST00000617482 CCDC141Q6ZP82 1450 aa15.89■□□□□ 0.13
C11orf54-215ENST00000617482 RNF123Q5XPI4 1314 aa15.89■□□□□ 0.13
C11orf54-215ENST00000617482 RSPH4AQ5TD94 716 aa15.89■□□□□ 0.13
C11orf54-215ENST00000617482 SALL2Q9Y467 1007 aaPredicted RBP15.89■□□□□ 0.13
C11orf54-215ENST00000617482 FAM135AQ9P2D6 1515 aa15.88■□□□□ 0.13
C11orf54-215ENST00000617482 CCDC144AA2RUR9 1427 aa15.88■□□□□ 0.13
C11orf54-215ENST00000617482 ARHGEF5Q12774 1597 aa15.88■□□□□ 0.13
C11orf54-215ENST00000617482 SAMD9LQ8IVG5 1584 aa15.87■□□□□ 0.13
C11orf54-215ENST00000617482 BRD4O60885 1362 aaPredicted RBP15.87■□□□□ 0.13
C11orf54-215ENST00000617482 CDC42BPBQ9Y5S2 1711 aa15.87■□□□□ 0.13
C11orf54-215ENST00000617482 ERCC6L2Q5T890 1561 aa15.86■□□□□ 0.13
C11orf54-215ENST00000617482 LRPPRCP42704 1394 aaKnown RBP15.85■□□□□ 0.13
C11orf54-215ENST00000617482 PRAG1Q86YV5 1406 aa15.85■□□□□ 0.13
C11orf54-215ENST00000617482 KTN1Q86UP2 1357 aaKnown RBP15.83■□□□□ 0.12
C11orf54-215ENST00000617482 PLA2R1Q13018 1463 aa15.83■□□□□ 0.12
C11orf54-215ENST00000617482 SYCP2Q9BX26 1530 aa15.82■□□□□ 0.12
C11orf54-215ENST00000617482 ARHGAP5Q13017 1502 aa15.82■□□□□ 0.12
C11orf54-215ENST00000617482 NLRP13Q86W25 1043 aa15.82■□□□□ 0.12
C11orf54-215ENST00000617482 TTC37Q6PGP7 1564 aa15.82■□□□□ 0.12
C11orf54-215ENST00000617482 PER1O15534 1290 aaPredicted RBP15.82■□□□□ 0.12
C11orf54-215ENST00000617482 CC2D1BQ5T0F9 858 aaKnown RBP15.82■□□□□ 0.12
C11orf54-215ENST00000617482 PREX2Q70Z35 1606 aa15.81■□□□□ 0.12
C11orf54-215ENST00000617482 PLEKHH2Q8IVE3 1493 aa15.8■□□□□ 0.12
C11orf54-215ENST00000617482 A2MP01023 1474 aa15.78■□□□□ 0.12
C11orf54-215ENST00000617482 TESK2Q96S53 571 aa15.78■□□□□ 0.12
C11orf54-215ENST00000617482 PARD3Q8TEW0 1356 aa15.78■□□□□ 0.12
C11orf54-215ENST00000617482 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.78■□□□□ 0.12
C11orf54-215ENST00000617482 PANK3Q9H999 370 aa15.78■□□□□ 0.12
C11orf54-215ENST00000617482 DISP3Q9P2K9 1392 aa15.78■□□□□ 0.12
C11orf54-215ENST00000617482 RRP1P56182 461 aaKnown RBP15.77■□□□□ 0.11
C11orf54-215ENST00000617482 RCAN3Q9UKA8 241 aa15.77■□□□□ 0.11
C11orf54-215ENST00000617482 TRPM1Q7Z4N2 1603 aa15.77■□□□□ 0.11
C11orf54-215ENST00000617482 EXOC6Q8TAG9 804 aa15.76■□□□□ 0.11
C11orf54-215ENST00000617482 GPRASP1Q5JY77 1395 aa15.76■□□□□ 0.11
C11orf54-215ENST00000617482 E9PCH4 1651 aa15.75■□□□□ 0.11
C11orf54-215ENST00000617482 CDCA7LQ96GN5 454 aa15.75■□□□□ 0.11
C11orf54-215ENST00000617482 SHROOM2Q13796 1616 aa15.74■□□□□ 0.11
C11orf54-215ENST00000617482 TMF1P82094 1093 aa15.74■□□□□ 0.11
C11orf54-215ENST00000617482 ERBINQ96RT1 1412 aa15.72■□□□□ 0.11
C11orf54-215ENST00000617482 UNC13BO14795 1591 aa15.72■□□□□ 0.11
C11orf54-215ENST00000617482 COL17A1Q9UMD9 1497 aaPredicted RBP15.72■□□□□ 0.11
C11orf54-215ENST00000617482 PAK3O75914 559 aaPredicted RBP15.72■□□□□ 0.11
C11orf54-215ENST00000617482 NOP58Q9Y2X3 529 aaKnown RBP15.72■□□□□ 0.11
C11orf54-215ENST00000617482 ABCC2Q92887 1545 aa15.71■□□□□ 0.11
C11orf54-215ENST00000617482 PDE3BQ13370 1112 aa15.71■□□□□ 0.11
C11orf54-215ENST00000617482 MAST1Q9Y2H9 1570 aa15.71■□□□□ 0.11
C11orf54-215ENST00000617482 EFCAB2Q5VUJ9 269 aa15.7■□□□□ 0.1
C11orf54-215ENST00000617482 WASHC2CQ9Y4E1 1318 aa15.7■□□□□ 0.1
C11orf54-215ENST00000617482 MYO5CQ9NQX4 1742 aa15.7■□□□□ 0.1
C11orf54-215ENST00000617482 PRDM15P57071 1507 aaPredicted RBP15.69■□□□□ 0.1
C11orf54-215ENST00000617482 PLIN1O60240 522 aa15.68■□□□□ 0.1
C11orf54-215ENST00000617482 DUOX2Q9NRD8 1548 aa15.68■□□□□ 0.1
C11orf54-215ENST00000617482 ANP32AP39687 249 aaKnown RBP15.68■□□□□ 0.1
C11orf54-215ENST00000617482 IQGAP3Q86VI3 1631 aa15.68■□□□□ 0.1
C11orf54-215ENST00000617482 PLCH2O75038 1416 aa15.67■□□□□ 0.1
C11orf54-215ENST00000617482 PLXNC1O60486 1568 aa15.66■□□□□ 0.1
C11orf54-215ENST00000617482 AFAP1Q8N556 730 aa15.66■□□□□ 0.1
C11orf54-215ENST00000617482 TRAPPC8Q9Y2L5 1435 aa15.66■□□□□ 0.1
C11orf54-215ENST00000617482 ZCCHC11Q5TAX3 1644 aaKnown RBP15.66■□□□□ 0.1
C11orf54-215ENST00000617482 ATP10AO60312 1499 aa15.65■□□□□ 0.1
C11orf54-215ENST00000617482 NBR1Q14596 966 aa15.65■□□□□ 0.1
C11orf54-215ENST00000617482 ADAMTS8Q9UP79 889 aa15.65■□□□□ 0.1
C11orf54-215ENST00000617482 IPO9Q96P70 1041 aaKnown RBP15.65■□□□□ 0.1
C11orf54-215ENST00000617482 KNSTRNQ9Y448 316 aa15.64■□□□□ 0.09
C11orf54-215ENST00000617482 SPAG9O60271 1321 aaKnown RBP15.63■□□□□ 0.09
C11orf54-215ENST00000617482 LAMC1P11047 1609 aa15.62■□□□□ 0.09
C11orf54-215ENST00000617482 EIF2AK4Q9P2K8 1649 aaKnown RBP15.62■□□□□ 0.09
C11orf54-215ENST00000617482 RTN4Q9NQC3 1192 aaKnown RBP15.62■□□□□ 0.09
C11orf54-215ENST00000617482 MAGI2Q86UL8 1455 aa15.62■□□□□ 0.09
C11orf54-215ENST00000617482 BLMP54132 1417 aaPredicted RBP15.61■□□□□ 0.09
C11orf54-215ENST00000617482 NPM2Q86SE8 214 aaKnown RBP15.61■□□□□ 0.09
C11orf54-215ENST00000617482 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
C11orf54-215ENST00000617482 PPP2R1AP30153 589 aa15.6■□□□□ 0.09
C11orf54-215ENST00000617482 TCERG1O14776 1098 aaKnown RBP15.59■□□□□ 0.09
C11orf54-215ENST00000617482 CRBNQ96SW2 442 aa15.59■□□□□ 0.09
C11orf54-215ENST00000617482 MYT1LQ9UL68 1186 aa15.59■□□□□ 0.09
C11orf54-215ENST00000617482 WDR7Q9Y4E6 1490 aa15.58■□□□□ 0.09
C11orf54-215ENST00000617482 WDR43Q15061 677 aaKnown RBP eCLIP15.58■□□□□ 0.09
C11orf54-215ENST00000617482 AMER1Q5JTC6 1135 aaPredicted RBP15.58■□□□□ 0.09
C11orf54-215ENST00000617482 CLASP1Q7Z460 1538 aa15.58■□□□□ 0.08
C11orf54-215ENST00000617482 PDE4AP27815 886 aa15.58■□□□□ 0.08
C11orf54-215ENST00000617482 SKAP1Q86WV1 359 aa15.57■□□□□ 0.08
C11orf54-215ENST00000617482 C20orf194Q5TEA3 1177 aa15.57■□□□□ 0.08
C11orf54-215ENST00000617482 INSRP06213 1382 aa15.57■□□□□ 0.08
C11orf54-215ENST00000617482 ABCC1P33527 1531 aa15.57■□□□□ 0.08
C11orf54-215ENST00000617482 EIF5BO60841 1220 aaKnown RBP15.56■□□□□ 0.08
C11orf54-215ENST00000617482 CDCA8Q53HL2 280 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms