RNA–Protein interactions for RNA: ENST00000615096.4

SCUBE1-208, Transcript of signal peptide, CUB domain and EGF like domain containing 1, human

TSL 2 BASIC

Gene SCUBE1, Length 1,119 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCUBE1-208	ENST00000615096	DEPDC5	O75140	1603 aa		33.31	■■■□□ 2.92
SCUBE1-208	ENST00000615096	PPP6R1	Q9UPN7	881 aa		33.29	■■■□□ 2.92
SCUBE1-208	ENST00000615096	SETD5	Q9C0A6	1442 aa		33.28	■■■□□ 2.92
SCUBE1-208	ENST00000615096	PRDM15	P57071	1507 aa	Predicted RBP	33.28	■■■□□ 2.92
SCUBE1-208	ENST00000615096	KDM4F	A0A1W2PPD8	638 aa		33.27	■■■□□ 2.92
SCUBE1-208	ENST00000615096	MADD	Q8WXG6	1647 aa		33.25	■■■□□ 2.91
SCUBE1-208	ENST00000615096	UNC13B	O14795	1591 aa		33.25	■■■□□ 2.91
SCUBE1-208	ENST00000615096	FAM135A	Q9P2D6	1515 aa		33.23	■■■□□ 2.91
SCUBE1-208	ENST00000615096	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.22	■■■□□ 2.91
SCUBE1-208	ENST00000615096	FER1L4	A9Z1Z3	1794 aa		33.21	■■■□□ 2.91
SCUBE1-208	ENST00000615096	KDM5D	Q9BY66	1539 aa		33.21	■■■□□ 2.91
SCUBE1-208	ENST00000615096	VWDE	Q8N2E2	1590 aa		33.21	■■■□□ 2.91
SCUBE1-208	ENST00000615096	RAB3GAP2	Q9H2M9	1393 aa		33.19	■■■□□ 2.9
SCUBE1-208	ENST00000615096	WASHC2C	Q9Y4E1	1318 aa		33.18	■■■□□ 2.9
SCUBE1-208	ENST00000615096	CNTLN	Q9NXG0	1405 aa		33.18	■■■□□ 2.9
SCUBE1-208	ENST00000615096	KANK1	Q14678	1352 aa		33.17	■■■□□ 2.9
SCUBE1-208	ENST00000615096	ABCC3	O15438	1527 aa		33.17	■■■□□ 2.9
SCUBE1-208	ENST00000615096	ESF1	Q9H501	851 aa	Known RBP	33.16	■■■□□ 2.9
SCUBE1-208	ENST00000615096	CLTC	Q00610	1675 aa	Known RBP	33.15	■■■□□ 2.9
SCUBE1-208	ENST00000615096	ZC3H13	Q5T200	1668 aa	Known RBP	33.15	■■■□□ 2.9
SCUBE1-208	ENST00000615096	RIMS1	Q86UR5	1692 aa	Known RBP	33.15	■■■□□ 2.9
SCUBE1-208	ENST00000615096	NUP155	O75694	1391 aa		33.13	■■■□□ 2.89
SCUBE1-208	ENST00000615096	LMTK2	Q8IWU2	1503 aa		33.12	■■■□□ 2.89
SCUBE1-208	ENST00000615096	MROH2A	A6NES4	1674 aa		33.11	■■■□□ 2.89
SCUBE1-208	ENST00000615096	HRC	P23327	699 aa		33.11	■■■□□ 2.89
SCUBE1-208	ENST00000615096	CEP152	O94986	1710 aa		33.11	■■■□□ 2.89
SCUBE1-208	ENST00000615096	IQGAP3	Q86VI3	1631 aa		33.1	■■■□□ 2.89
SCUBE1-208	ENST00000615096	PTPRM	P28827	1452 aa		33.09	■■■□□ 2.89
SCUBE1-208	ENST00000615096	ZMYM3	Q14202	1370 aa		33.09	■■■□□ 2.89
SCUBE1-208	ENST00000615096	ACIN1	Q9UKV3	1341 aa	Known RBP	33.08	■■■□□ 2.89
SCUBE1-208	ENST00000615096	PCGF6	Q9BYE7	350 aa		33.08	■■■□□ 2.89
SCUBE1-208	ENST00000615096	TRIM52	Q96A61	297 aa		33.07	■■■□□ 2.88
SCUBE1-208	ENST00000615096	CAMSAP1	Q5T5Y3	1602 aa		33.05	■■■□□ 2.88
SCUBE1-208	ENST00000615096	C3	P01024	1663 aa		33.02	■■■□□ 2.88
SCUBE1-208	ENST00000615096	PZP	P20742	1482 aa		33.02	■■■□□ 2.88
SCUBE1-208	ENST00000615096	TET3	O43151	1660 aa		33.01	■■■□□ 2.88
SCUBE1-208	ENST00000615096	CEBPA	P49715	358 aa	Predicted RBP	33.01	■■■□□ 2.87
SCUBE1-208	ENST00000615096	ARHGAP31	Q2M1Z3	1444 aa		33.01	■■■□□ 2.87
SCUBE1-208	ENST00000615096	EFCAB6	Q5THR3	1501 aa		33	■■■□□ 2.87
SCUBE1-208	ENST00000615096	NPAT	Q14207	1427 aa		32.97	■■■□□ 2.87
SCUBE1-208	ENST00000615096	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.93	■■■□□ 2.86
SCUBE1-208	ENST00000615096	PLPPR3	Q6T4P5	718 aa		32.92	■■■□□ 2.86
SCUBE1-208	ENST00000615096	RPRD2	Q5VT52	1461 aa	Known RBP	32.92	■■■□□ 2.86
SCUBE1-208	ENST00000615096		E9PCH4	1651 aa		32.91	■■■□□ 2.86
SCUBE1-208	ENST00000615096	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.91	■■■□□ 2.86
SCUBE1-208	ENST00000615096	MPHOSPH9	Q99550	1183 aa		32.91	■■■□□ 2.86
SCUBE1-208	ENST00000615096	ERVK-7	P63135	1459 aa		32.86	■■■□□ 2.85
SCUBE1-208	ENST00000615096	PKD2	Q13563	968 aa		32.86	■■■□□ 2.85
SCUBE1-208	ENST00000615096	SPATA31D1	Q6ZQQ2	1576 aa		32.86	■■■□□ 2.85
SCUBE1-208	ENST00000615096	PREX1	Q8TCU6	1659 aa		32.85	■■■□□ 2.85
SCUBE1-208	ENST00000615096	NOS1	P29475	1434 aa		32.83	■■■□□ 2.85
SCUBE1-208	ENST00000615096	TNR	Q92752	1358 aa		32.79	■■■□□ 2.84
SCUBE1-208	ENST00000615096	PTPRT	O14522	1441 aa		32.77	■■■□□ 2.84
SCUBE1-208	ENST00000615096	FOXD1	Q16676	465 aa		32.76	■■■□□ 2.83
SCUBE1-208	ENST00000615096	CFAP65	Q6ZU64	1925 aa	Known RBP	32.76	■■■□□ 2.83
SCUBE1-208	ENST00000615096	SYNM	O15061	1565 aa		32.75	■■■□□ 2.83
SCUBE1-208	ENST00000615096	PLA2R1	Q13018	1463 aa		32.72	■■■□□ 2.83
SCUBE1-208	ENST00000615096	SPHKAP	Q2M3C7	1700 aa		32.71	■■■□□ 2.83
SCUBE1-208	ENST00000615096	SETD1B	Q9UPS6	1966 aa	Known RBP	32.7	■■■□□ 2.82
SCUBE1-208	ENST00000615096	MYO3A	Q8NEV4	1616 aa		32.69	■■■□□ 2.82
SCUBE1-208	ENST00000615096	NLRP1	Q9C000	1473 aa		32.68	■■■□□ 2.82
SCUBE1-208	ENST00000615096	DHX57	Q6P158	1386 aa	Known RBP	32.68	■■■□□ 2.82
SCUBE1-208	ENST00000615096	TRPM2	O94759	1503 aa		32.67	■■■□□ 2.82
SCUBE1-208	ENST00000615096	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.67	■■■□□ 2.82
SCUBE1-208	ENST00000615096	UHRF1BP1	Q6BDS2	1440 aa		32.67	■■■□□ 2.82
SCUBE1-208	ENST00000615096	SLC52A1	Q9NWF4	448 aa		32.65	■■■□□ 2.82
SCUBE1-208	ENST00000615096	PIK3C2B	O00750	1634 aa		32.65	■■■□□ 2.82
SCUBE1-208	ENST00000615096	IDI1	Q13907	227 aa		32.64	■■■□□ 2.82
SCUBE1-208	ENST00000615096	UGGT1	Q9NYU2	1555 aa		32.64	■■■□□ 2.82
SCUBE1-208	ENST00000615096	A2ML1	A8K2U0	1454 aa		32.61	■■■□□ 2.81
SCUBE1-208	ENST00000615096	ANKRD30B	Q9BXX2	1392 aa		32.61	■■■□□ 2.81
SCUBE1-208	ENST00000615096	ZNF142	P52746	1687 aa	Predicted RBP	32.61	■■■□□ 2.81
SCUBE1-208	ENST00000615096	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.61	■■■□□ 2.81
SCUBE1-208	ENST00000615096	LMTK3	Q96Q04	1460 aa		32.6	■■■□□ 2.81
SCUBE1-208	ENST00000615096	CLTCL1	P53675	1640 aa		32.58	■■■□□ 2.81
SCUBE1-208	ENST00000615096	CCDC144A	A2RUR9	1427 aa		32.53	■■■□□ 2.8
SCUBE1-208	ENST00000615096	KDM5A	P29375	1690 aa	Known RBP	32.51	■■■□□ 2.79
SCUBE1-208	ENST00000615096	UBR1	Q8IWV7	1749 aa		32.51	■■■□□ 2.79
SCUBE1-208	ENST00000615096	ADGRB3	O60242	1522 aa		32.51	■■■□□ 2.79
SCUBE1-208	ENST00000615096	TMEM131L	A2VDJ0	1609 aa		32.49	■■■□□ 2.79
SCUBE1-208	ENST00000615096	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.46	■■■□□ 2.79
SCUBE1-208	ENST00000615096	STAG3	Q9UJ98	1225 aa		32.46	■■■□□ 2.79
SCUBE1-208	ENST00000615096	HSPA2	P54652	639 aa		32.44	■■■□□ 2.78
SCUBE1-208	ENST00000615096	CHGA	P10645	457 aa	Known RBP	32.43	■■■□□ 2.78
SCUBE1-208	ENST00000615096	KIF1B	O60333	1816 aa		32.42	■■■□□ 2.78
SCUBE1-208	ENST00000615096	SPATA31E1	Q6ZUB1	1445 aa		32.39	■■■□□ 2.78
SCUBE1-208	ENST00000615096	MYO5B	Q9ULV0	1848 aa		32.39	■■■□□ 2.78
SCUBE1-208	ENST00000615096	NEURL4	Q96JN8	1562 aa		32.38	■■■□□ 2.77
SCUBE1-208	ENST00000615096	SLIT1	O75093	1534 aa		32.38	■■■□□ 2.77
SCUBE1-208	ENST00000615096	ARHGAP23	Q9P227	1491 aa		32.38	■■■□□ 2.77
SCUBE1-208	ENST00000615096	TMEM2	Q9UHN6	1383 aa		32.37	■■■□□ 2.77
SCUBE1-208	ENST00000615096	SIN3A	Q96ST3	1273 aa		32.34	■■■□□ 2.77
SCUBE1-208	ENST00000615096	ZFYVE9	O95405	1425 aa		32.32	■■■□□ 2.76
SCUBE1-208	ENST00000615096	CLSPN	Q9HAW4	1339 aa		32.3	■■■□□ 2.76
SCUBE1-208	ENST00000615096	ZNF326	Q5BKZ1	582 aa	Known RBP	32.3	■■■□□ 2.76
SCUBE1-208	ENST00000615096	CCER1	Q8TC90	406 aa	Predicted RBP	32.3	■■■□□ 2.76
SCUBE1-208	ENST00000615096	RIMS2	Q9UQ26	1411 aa		32.29	■■■□□ 2.76
SCUBE1-208	ENST00000615096	RGL3	Q3MIN7	710 aa		32.29	■■■□□ 2.76
SCUBE1-208	ENST00000615096	LTK	P29376	864 aa		32.27	■■■□□ 2.76
SCUBE1-208	ENST00000615096	ANKLE2	Q86XL3	938 aa		32.27	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms