RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 PKD2Q13563 968 aa8.53□□□□□ -1.04
CLCN3-211ENST00000613795 CC2D1BQ5T0F9 858 aaKnown RBP8.53□□□□□ -1.04
CLCN3-211ENST00000613795 GOLGA2Q08379 1002 aa8.52□□□□□ -1.04
CLCN3-211ENST00000613795 KIF16BQ96L93 1317 aa8.52□□□□□ -1.05
CLCN3-211ENST00000613795 ATAD2BQ9ULI0 1458 aa8.52□□□□□ -1.05
CLCN3-211ENST00000613795 MFAP1P55081 439 aaKnown RBP8.52□□□□□ -1.05
CLCN3-211ENST00000613795 WIZO95785 1651 aa8.52□□□□□ -1.05
CLCN3-211ENST00000613795 DIAPH3Q9NSV4 1193 aa8.52□□□□□ -1.05
CLCN3-211ENST00000613795 MPHOSPH9Q99550 1183 aa8.52□□□□□ -1.05
CLCN3-211ENST00000613795 NUP155O75694 1391 aa8.51□□□□□ -1.05
CLCN3-211ENST00000613795 TERF2IPQ9NYB0 399 aa8.51□□□□□ -1.05
CLCN3-211ENST00000613795 CWC15Q9P013 229 aaKnown RBP8.51□□□□□ -1.05
CLCN3-211ENST00000613795 STAC3Q96MF2 364 aa8.51□□□□□ -1.05
CLCN3-211ENST00000613795 NPHP1O15259 732 aa8.51□□□□□ -1.05
CLCN3-211ENST00000613795 FGD1P98174 961 aa8.51□□□□□ -1.05
CLCN3-211ENST00000613795 KCNJ4P48050 445 aa8.51□□□□□ -1.05
CLCN3-211ENST00000613795 CCDC39Q9UFE4 941 aa8.51□□□□□ -1.05
CLCN3-211ENST00000613795 RAB3GAP2Q9H2M9 1393 aa8.5□□□□□ -1.05
CLCN3-211ENST00000613795 HMGN5P82970 282 aaKnown RBP8.5□□□□□ -1.05
CLCN3-211ENST00000613795 CUX1P39880 1505 aa8.5□□□□□ -1.05
CLCN3-211ENST00000613795 RRP1P56182 461 aaKnown RBP8.5□□□□□ -1.05
CLCN3-211ENST00000613795 ZNF526Q8TF50 670 aaPredicted RBP8.5□□□□□ -1.05
CLCN3-211ENST00000613795 SPAG9O60271 1321 aaKnown RBP8.49□□□□□ -1.05
CLCN3-211ENST00000613795 ST18O60284 1047 aa8.49□□□□□ -1.05
CLCN3-211ENST00000613795 R3HCC1Q9Y3T6 440 aaKnown RBP8.49□□□□□ -1.05
CLCN3-211ENST00000613795 EID1Q9Y6B2 187 aa8.49□□□□□ -1.05
CLCN3-211ENST00000613795 NOC3LQ8WTT2 800 aaKnown RBP8.49□□□□□ -1.05
CLCN3-211ENST00000613795 SLC4A3P48751 1232 aa8.49□□□□□ -1.05
CLCN3-211ENST00000613795 NEUROD2Q15784 382 aa8.49□□□□□ -1.05
CLCN3-211ENST00000613795 CHMP4CQ96CF2 233 aa8.49□□□□□ -1.05
CLCN3-211ENST00000613795 GPATCH3Q96I76 525 aa8.49□□□□□ -1.05
CLCN3-211ENST00000613795 TPM3P06753 285 aa8.48□□□□□ -1.05
CLCN3-211ENST00000613795 CCDC173Q0VFZ6 552 aa8.48□□□□□ -1.05
CLCN3-211ENST00000613795 NGEFQ8N5V2 710 aa8.48□□□□□ -1.05
CLCN3-211ENST00000613795 LMOD2Q6P5Q4 547 aa8.48□□□□□ -1.05
CLCN3-211ENST00000613795 ARGLU1Q9NWB6 273 aaPredicted RBP8.48□□□□□ -1.05
CLCN3-211ENST00000613795 KIF15Q9NS87 1388 aa8.47□□□□□ -1.05
CLCN3-211ENST00000613795 HMMRO75330 724 aa8.47□□□□□ -1.05
CLCN3-211ENST00000613795 KIAA1211Q6ZU35 1233 aa8.47□□□□□ -1.05
CLCN3-211ENST00000613795 FANCD2Q9BXW9 1451 aa8.47□□□□□ -1.05
CLCN3-211ENST00000613795 PDE4CQ08493 712 aa8.46□□□□□ -1.05
CLCN3-211ENST00000613795 TSPYL1Q9H0U9 437 aa8.46□□□□□ -1.06
CLCN3-211ENST00000613795 ATP6V1DQ9Y5K8 247 aa8.46□□□□□ -1.06
CLCN3-211ENST00000613795 HMGB1P09429 215 aaKnown RBP8.46□□□□□ -1.06
CLCN3-211ENST00000613795 CCDC34Q96HJ3 373 aa8.46□□□□□ -1.06
CLCN3-211ENST00000613795 NASPP49321 788 aaPredicted RBP8.45□□□□□ -1.06
CLCN3-211ENST00000613795 TDRD9Q8NDG6 1382 aaKnown RBP8.45□□□□□ -1.06
CLCN3-211ENST00000613795 GGT6Q6P531 493 aa8.45□□□□□ -1.06
CLCN3-211ENST00000613795 PDCL3Q9H2J4 239 aa8.45□□□□□ -1.06
CLCN3-211ENST00000613795 EXOC6Q8TAG9 804 aa8.45□□□□□ -1.06
CLCN3-211ENST00000613795 STK31Q9BXU1 1019 aa8.45□□□□□ -1.06
CLCN3-211ENST00000613795 TMX4Q9H1E5 349 aaPredicted RBP8.45□□□□□ -1.06
CLCN3-211ENST00000613795 NLRP13Q86W25 1043 aa8.44□□□□□ -1.06
CLCN3-211ENST00000613795 ACBD3Q9H3P7 528 aa8.44□□□□□ -1.06
CLCN3-211ENST00000613795 CCDC144AA2RUR9 1427 aa8.44□□□□□ -1.06
CLCN3-211ENST00000613795 PDIA4P13667 645 aaKnown RBP8.44□□□□□ -1.06
CLCN3-211ENST00000613795 CGNL1Q0VF96 1302 aa8.43□□□□□ -1.06
CLCN3-211ENST00000613795 DHX57Q6P158 1386 aaKnown RBP8.43□□□□□ -1.06
CLCN3-211ENST00000613795 NUCB2P80303 420 aa8.43□□□□□ -1.06
CLCN3-211ENST00000613795 ZMYND15Q9H091 742 aa8.43□□□□□ -1.06
CLCN3-211ENST00000613795 TRHP20396 242 aaPredicted RBP8.43□□□□□ -1.06
CLCN3-211ENST00000613795 FHOD3Q2V2M9 1422 aa8.43□□□□□ -1.06
CLCN3-211ENST00000613795 GOLGA6L19H0YKK7 550 aa8.42□□□□□ -1.06
CLCN3-211ENST00000613795 CENPJQ9HC77 1338 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-211ENST00000613795 TRAK2O60296 914 aa8.42□□□□□ -1.06
CLCN3-211ENST00000613795 PAK3O75914 559 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-211ENST00000613795 ITPRIPQ8IWB1 547 aa8.42□□□□□ -1.06
CLCN3-211ENST00000613795 CCDC70Q6NSX1 233 aa8.42□□□□□ -1.06
CLCN3-211ENST00000613795 AAMPQ13685 434 aa8.42□□□□□ -1.06
CLCN3-211ENST00000613795 KANK4Q5T7N3 995 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-211ENST00000613795 MYBBP1AQ9BQG0 1328 aaKnown RBP8.41□□□□□ -1.06
CLCN3-211ENST00000613795 U2AF1L5P0DN76 240 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-211ENST00000613795 U2AF1Q01081 240 aaKnown RBP eCLIP8.41□□□□□ -1.068e-8■■■■□ 19.8
CLCN3-211ENST00000613795 MYOM3Q5VTT5 1437 aa8.41□□□□□ -1.06
CLCN3-211ENST00000613795 JPH4Q96JJ6 628 aa8.41□□□□□ -1.06
CLCN3-211ENST00000613795 WASHC2CQ9Y4E1 1318 aa8.41□□□□□ -1.06
CLCN3-211ENST00000613795 ESPNB1AK53 854 aa8.41□□□□□ -1.06
CLCN3-211ENST00000613795 FOXD4L1Q9NU39 408 aa8.41□□□□□ -1.06
CLCN3-211ENST00000613795 KIF3BO15066 747 aa8.41□□□□□ -1.06
CLCN3-211ENST00000613795 VGFO15240 615 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-211ENST00000613795 RBM10P98175 930 aaKnown RBP8.41□□□□□ -1.06
CLCN3-211ENST00000613795 PTPRGP23470 1445 aa8.41□□□□□ -1.06
CLCN3-211ENST00000613795 GNL2Q13823 731 aaKnown RBP8.41□□□□□ -1.06
CLCN3-211ENST00000613795 CRBNQ96SW2 442 aa8.41□□□□□ -1.06
CLCN3-211ENST00000613795 PRKRIP1Q9H875 184 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-211ENST00000613795 KIF3AQ9Y496 699 aa8.4□□□□□ -1.06
CLCN3-211ENST00000613795 ZNF592Q92610 1267 aa8.4□□□□□ -1.06
CLCN3-211ENST00000613795 PHF23Q9BUL5 403 aaPredicted RBP8.4□□□□□ -1.06
CLCN3-211ENST00000613795 PDCL2Q8N4E4 241 aa8.4□□□□□ -1.06
CLCN3-211ENST00000613795 RDXP35241 583 aaKnown RBP8.4□□□□□ -1.07
CLCN3-211ENST00000613795 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.4□□□□□ -1.07
CLCN3-211ENST00000613795 NAP1L2Q9ULW6 460 aaPredicted RBP8.4□□□□□ -1.07
CLCN3-211ENST00000613795 MLECQ14165 292 aa8.39□□□□□ -1.07
CLCN3-211ENST00000613795 FRAT2O75474 233 aaPredicted RBP8.39□□□□□ -1.07
CLCN3-211ENST00000613795 CSB-PGBD3P0DP91 1061 aa8.39□□□□□ -1.07
CLCN3-211ENST00000613795 EVC2Q86UK5 1308 aa8.39□□□□□ -1.07
CLCN3-211ENST00000613795 UQCRHLA0A096LP55 91 aa8.39□□□□□ -1.07
CLCN3-211ENST00000613795 UQCRHP07919 91 aa8.39□□□□□ -1.07
CLCN3-211ENST00000613795 GAPVD1Q14C86 1478 aa8.39□□□□□ -1.07
CLCN3-211ENST00000613795 MSH5O43196 834 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms