RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 TEX14Q8IWB6 1497 aa18.09■□□□□ 0.49
HPS1-215ENST00000613394 BRD4O60885 1362 aaPredicted RBP18.08■□□□□ 0.49
HPS1-215ENST00000613394 C9orf84Q5VXU9 1444 aa18.08■□□□□ 0.49
HPS1-215ENST00000613394 KIAA0586Q9BVV6 1533 aa18.08■□□□□ 0.48
HPS1-215ENST00000613394 ARXQ96QS3 562 aa18.07■□□□□ 0.48
HPS1-215ENST00000613394 ARID4BQ4LE39 1312 aaPredicted RBP18.07■□□□□ 0.48
HPS1-215ENST00000613394 ADAMTS8Q9UP79 889 aa18.07■□□□□ 0.48
HPS1-215ENST00000613394 ABCA5Q8WWZ7 1642 aa18.06■□□□□ 0.48
HPS1-215ENST00000613394 PDE3BQ13370 1112 aa18.06■□□□□ 0.48
HPS1-215ENST00000613394 FRAT1Q92837 279 aaPredicted RBP18.06■□□□□ 0.48
HPS1-215ENST00000613394 SPATA31E1Q6ZUB1 1445 aa18.05■□□□□ 0.48
HPS1-215ENST00000613394 WDR62O43379 1518 aa18.05■□□□□ 0.48
HPS1-215ENST00000613394 PZPP20742 1482 aa18.05■□□□□ 0.48
HPS1-215ENST00000613394 GPATCH8Q9UKJ3 1502 aaKnown RBP18.04■□□□□ 0.48
HPS1-215ENST00000613394 ARHGEF11O15085 1522 aa18.04■□□□□ 0.48
HPS1-215ENST00000613394 LRRIQ1Q96JM4 1722 aa18.03■□□□□ 0.48
HPS1-215ENST00000613394 C20orf194Q5TEA3 1177 aa18.02■□□□□ 0.48
HPS1-215ENST00000613394 DDRGK1Q96HY6 314 aa18.01■□□□□ 0.47
HPS1-215ENST00000613394 PTPRGP23470 1445 aa18.01■□□□□ 0.47
HPS1-215ENST00000613394 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
HPS1-215ENST00000613394 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
HPS1-215ENST00000613394 GOLGA2Q08379 1002 aa18■□□□□ 0.47
HPS1-215ENST00000613394 GCC2Q8IWJ2 1684 aa17.98■□□□□ 0.47
HPS1-215ENST00000613394 APAF1O14727 1248 aa17.98■□□□□ 0.47
HPS1-215ENST00000613394 GRIN2AQ12879 1464 aa17.97■□□□□ 0.47
HPS1-215ENST00000613394 BACH2Q9BYV9 841 aa17.97■□□□□ 0.47
HPS1-215ENST00000613394 CDCA8Q53HL2 280 aa17.97■□□□□ 0.47
HPS1-215ENST00000613394 RRP7AQ9Y3A4 280 aaKnown RBP17.96■□□□□ 0.47
HPS1-215ENST00000613394 DISP1Q96F81 1524 aa17.95■□□□□ 0.46
HPS1-215ENST00000613394 EIF5BO60841 1220 aaKnown RBP17.94■□□□□ 0.46
HPS1-215ENST00000613394 ADAMTS12P58397 1594 aa17.93■□□□□ 0.46
HPS1-215ENST00000613394 DNMT1P26358 1616 aaKnown RBP17.93■□□□□ 0.46
HPS1-215ENST00000613394 IL27Q8NEV9 243 aa17.93■□□□□ 0.46
HPS1-215ENST00000613394 RSPH4AQ5TD94 716 aa17.92■□□□□ 0.46
HPS1-215ENST00000613394 RAPGEF6Q8TEU7 1601 aa17.92■□□□□ 0.46
HPS1-215ENST00000613394 DISP3Q9P2K9 1392 aa17.92■□□□□ 0.46
HPS1-215ENST00000613394 KIF3BO15066 747 aa17.92■□□□□ 0.46
HPS1-215ENST00000613394 PPP2R1AP30153 589 aa17.92■□□□□ 0.46
HPS1-215ENST00000613394 EFCAB2Q5VUJ9 269 aa17.92■□□□□ 0.46
HPS1-215ENST00000613394 BCL2L13Q9BXK5 485 aa17.92■□□□□ 0.46
HPS1-215ENST00000613394 SAFB2Q14151 953 aaKnown RBP eCLIP17.91■□□□□ 0.46
HPS1-215ENST00000613394 TARBP1Q13395 1621 aaKnown RBP17.91■□□□□ 0.46
HPS1-215ENST00000613394 MS4A1P11836 297 aa17.9■□□□□ 0.46
HPS1-215ENST00000613394 CLUAP1Q96AJ1 413 aa17.9■□□□□ 0.46
HPS1-215ENST00000613394 AFAP1Q8N556 730 aa17.9■□□□□ 0.46
HPS1-215ENST00000613394 MAGI1Q96QZ7 1491 aaPredicted RBP17.89■□□□□ 0.46
HPS1-215ENST00000613394 KIAA0556O60303 1618 aa17.89■□□□□ 0.46
HPS1-215ENST00000613394 RNF123Q5XPI4 1314 aa17.89■□□□□ 0.45
HPS1-215ENST00000613394 NUTM2DQ5VT03 806 aaPredicted RBP17.89■□□□□ 0.45
HPS1-215ENST00000613394 SPRYD3Q8NCJ5 442 aa17.89■□□□□ 0.45
HPS1-215ENST00000613394 SLKQ9H2G2 1235 aaPredicted RBP17.88■□□□□ 0.45
HPS1-215ENST00000613394 SPAG9O60271 1321 aaKnown RBP17.87■□□□□ 0.45
HPS1-215ENST00000613394 BCAR3O75815 825 aa17.87■□□□□ 0.45
HPS1-215ENST00000613394 COG6Q9Y2V7 657 aa17.87■□□□□ 0.45
HPS1-215ENST00000613394 RALGAPBQ86X10 1494 aa17.87■□□□□ 0.45
HPS1-215ENST00000613394 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.87■□□□□ 0.45
HPS1-215ENST00000613394 PER1O15534 1290 aaPredicted RBP17.87■□□□□ 0.45
HPS1-215ENST00000613394 KIF14Q15058 1648 aa17.86■□□□□ 0.45
HPS1-215ENST00000613394 CENPQQ7L2Z9 268 aaPredicted RBP17.86■□□□□ 0.45
HPS1-215ENST00000613394 MORC1Q86VD1 984 aa17.86■□□□□ 0.45
HPS1-215ENST00000613394 ERBINQ96RT1 1412 aa17.85■□□□□ 0.45
HPS1-215ENST00000613394 UPF2Q9HAU5 1272 aaKnown RBP17.85■□□□□ 0.45
HPS1-215ENST00000613394 PBRM1Q86U86 1689 aa17.85■□□□□ 0.45
HPS1-215ENST00000613394 TRAK1Q9UPV9 953 aa17.85■□□□□ 0.45
HPS1-215ENST00000613394 FAM161AQ3B820 660 aa17.84■□□□□ 0.45
HPS1-215ENST00000613394 CFAP70Q5T0N1 1121 aa17.84■□□□□ 0.45
HPS1-215ENST00000613394 BCORL1Q5H9F3 1711 aa17.84■□□□□ 0.45
HPS1-215ENST00000613394 ATP10BO94823 1461 aa17.84■□□□□ 0.45
HPS1-215ENST00000613394 TESK2Q96S53 571 aa17.83■□□□□ 0.45
HPS1-215ENST00000613394 LRPPRCP42704 1394 aaKnown RBP17.83■□□□□ 0.44
HPS1-215ENST00000613394 PANK1Q8TE04 598 aa17.83■□□□□ 0.44
HPS1-215ENST00000613394 ARHGAP5Q13017 1502 aa17.83■□□□□ 0.44
HPS1-215ENST00000613394 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
HPS1-215ENST00000613394 NFKBIBQ15653 356 aa17.82■□□□□ 0.44
HPS1-215ENST00000613394 GGT6Q6P531 493 aa17.82■□□□□ 0.44
HPS1-215ENST00000613394 PARD3Q8TEW0 1356 aa17.8■□□□□ 0.44
HPS1-215ENST00000613394 U2SURPO15042 1029 aaKnown RBP17.8■□□□□ 0.44
HPS1-215ENST00000613394 PLEKHH2Q8IVE3 1493 aa17.8■□□□□ 0.44
HPS1-215ENST00000613394 CENPJQ9HC77 1338 aaPredicted RBP17.79■□□□□ 0.44
HPS1-215ENST00000613394 BRPF3Q9ULD4 1205 aa17.78■□□□□ 0.44
HPS1-215ENST00000613394 PRAG1Q86YV5 1406 aa17.77■□□□□ 0.44
HPS1-215ENST00000613394 DUSP27Q5VZP5 1158 aa17.77■□□□□ 0.44
HPS1-215ENST00000613394 CCDC141Q6ZP82 1450 aa17.77■□□□□ 0.44
HPS1-215ENST00000613394 FTSJ3Q8IY81 847 aaKnown RBP17.77■□□□□ 0.44
HPS1-215ENST00000613394 WASHC2CQ9Y4E1 1318 aa17.77■□□□□ 0.44
HPS1-215ENST00000613394 U2AF1L5P0DN76 240 aaPredicted RBP17.76■□□□□ 0.43
HPS1-215ENST00000613394 U2AF1Q01081 240 aaKnown RBP eCLIP17.76■□□□□ 0.43
HPS1-215ENST00000613394 GSE1Q14687 1217 aa17.76■□□□□ 0.43
HPS1-215ENST00000613394 USP35Q9P2H5 1018 aa17.76■□□□□ 0.43
HPS1-215ENST00000613394 BECN1Q14457 450 aa17.76■□□□□ 0.43
HPS1-215ENST00000613394 STK26Q9P289 416 aa17.76■□□□□ 0.43
HPS1-215ENST00000613394 UHRF1BP1Q6BDS2 1440 aa17.76■□□□□ 0.43
HPS1-215ENST00000613394 EIF4G3O43432 1585 aaKnown RBP17.75■□□□□ 0.43
HPS1-215ENST00000613394 FRAT2O75474 233 aaPredicted RBP17.75■□□□□ 0.43
HPS1-215ENST00000613394 CFAP53Q96M91 514 aa17.75■□□□□ 0.43
HPS1-215ENST00000613394 KDM5CP41229 1560 aa17.74■□□□□ 0.43
HPS1-215ENST00000613394 TMEM132EQ6IEE7 984 aa17.74■□□□□ 0.43
HPS1-215ENST00000613394 ANO8Q9HCE9 1232 aaPredicted RBP17.74■□□□□ 0.43
HPS1-215ENST00000613394 KANK1Q14678 1352 aa17.74■□□□□ 0.43
HPS1-215ENST00000613394 E9PSI1 815 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms