RNA–Protein interactions for RNA: ENST00000611964.1

AL049539.1-201, humanhuman

BASIC

Gene AL049539.1, Length 459 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049539.1-201ENST00000611964 ABCC1P33527 1531 aa8.64□□□□□ -1.03
AL049539.1-201ENST00000611964 A2ML1A8K2U0 1454 aa8.64□□□□□ -1.03
AL049539.1-201ENST00000611964 KIDINS220Q9ULH0 1771 aa8.64□□□□□ -1.03
AL049539.1-201ENST00000611964 RGS17Q9UGC6 210 aaPredicted RBP8.64□□□□□ -1.03
AL049539.1-201ENST00000611964 CDK11AQ9UQ88 783 aaPredicted RBP8.64□□□□□ -1.03
AL049539.1-201ENST00000611964 NEURL4Q96JN8 1562 aa8.64□□□□□ -1.03
AL049539.1-201ENST00000611964 TROQ12816 1431 aaPredicted RBP8.63□□□□□ -1.03
AL049539.1-201ENST00000611964 ITSN2Q9NZM3 1697 aa8.62□□□□□ -1.03
AL049539.1-201ENST00000611964 VWDEQ8N2E2 1590 aa8.62□□□□□ -1.03
AL049539.1-201ENST00000611964 AKT1S1Q96B36 256 aa8.62□□□□□ -1.03
AL049539.1-201ENST00000611964 CLIP1P30622 1438 aa8.62□□□□□ -1.03
AL049539.1-201ENST00000611964 DNMT1P26358 1616 aaKnown RBP8.62□□□□□ -1.03
AL049539.1-201ENST00000611964 RNF17Q9BXT8 1623 aaKnown RBP8.62□□□□□ -1.03
AL049539.1-201ENST00000611964 CLTCQ00610 1675 aaKnown RBP8.61□□□□□ -1.03
AL049539.1-201ENST00000611964 PREX2Q70Z35 1606 aa8.61□□□□□ -1.03
AL049539.1-201ENST00000611964 SYNMO15061 1565 aa8.61□□□□□ -1.03
AL049539.1-201ENST00000611964 PLXNC1O60486 1568 aa8.61□□□□□ -1.03
AL049539.1-201ENST00000611964 CDC42BPBQ9Y5S2 1711 aa8.6□□□□□ -1.03
AL049539.1-201ENST00000611964 MED14O60244 1454 aa8.59□□□□□ -1.03
AL049539.1-201ENST00000611964 DEPDC5O75140 1603 aa8.59□□□□□ -1.03
AL049539.1-201ENST00000611964 FMN1Q68DA7 1419 aa8.59□□□□□ -1.03
AL049539.1-201ENST00000611964 SAMD9LQ8IVG5 1584 aa8.58□□□□□ -1.04
AL049539.1-201ENST00000611964 REM2Q8IYK8 340 aaPredicted RBP8.58□□□□□ -1.04
AL049539.1-201ENST00000611964 CSRNP3Q8WYN3 585 aa8.58□□□□□ -1.04
AL049539.1-201ENST00000611964 POTEAQ6S8J7 498 aa8.57□□□□□ -1.04
AL049539.1-201ENST00000611964 LRRC7Q96NW7 1537 aa8.57□□□□□ -1.04
AL049539.1-201ENST00000611964 NPHP4O75161 1426 aaPredicted RBP8.56□□□□□ -1.04
AL049539.1-201ENST00000611964 FAM135AQ9P2D6 1515 aa8.56□□□□□ -1.04
AL049539.1-201ENST00000611964 ANKLE2Q86XL3 938 aa8.56□□□□□ -1.04
AL049539.1-201ENST00000611964 A2MP01023 1474 aa8.56□□□□□ -1.04
AL049539.1-201ENST00000611964 ATP7AQ04656 1500 aa8.55□□□□□ -1.04
AL049539.1-201ENST00000611964 TNRQ92752 1358 aa8.55□□□□□ -1.04
AL049539.1-201ENST00000611964 INO80Q9ULG1 1556 aaPredicted RBP8.55□□□□□ -1.04
AL049539.1-201ENST00000611964 SPAG9O60271 1321 aaKnown RBP8.54□□□□□ -1.04
AL049539.1-201ENST00000611964 EEA1Q15075 1411 aa8.54□□□□□ -1.04
AL049539.1-201ENST00000611964 IQGAP1P46940 1657 aa8.54□□□□□ -1.04
AL049539.1-201ENST00000611964 NLRP1Q9C000 1473 aa8.54□□□□□ -1.04
AL049539.1-201ENST00000611964 RANGAP1P46060 587 aaPredicted RBP8.54□□□□□ -1.04
AL049539.1-201ENST00000611964 SETD1AO15047 1707 aaKnown RBP8.54□□□□□ -1.04
AL049539.1-201ENST00000611964 FAM135BQ49AJ0 1406 aa8.54□□□□□ -1.04
AL049539.1-201ENST00000611964 PZPP20742 1482 aa8.53□□□□□ -1.04
AL049539.1-201ENST00000611964 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
AL049539.1-201ENST00000611964 THEMISQ8N1K5 641 aaPredicted RBP8.53□□□□□ -1.04
AL049539.1-201ENST00000611964 KIAA1107Q9UPP5 1409 aa8.53□□□□□ -1.04
AL049539.1-201ENST00000611964 STRCP1A6NGW2 1772 aa8.53□□□□□ -1.04
AL049539.1-201ENST00000611964 PLEKHH2Q8IVE3 1493 aa8.52□□□□□ -1.05
AL049539.1-201ENST00000611964 SYCP2Q9BX26 1530 aa8.52□□□□□ -1.05
AL049539.1-201ENST00000611964 ADGBQ8N7X0 1667 aa8.52□□□□□ -1.05
AL049539.1-201ENST00000611964 CDC42BPAQ5VT25 1732 aa8.51□□□□□ -1.05
AL049539.1-201ENST00000611964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.51□□□□□ -1.05
AL049539.1-201ENST00000611964 UGGT1Q9NYU2 1555 aa8.51□□□□□ -1.05
AL049539.1-201ENST00000611964 PITPNM1O00562 1244 aa8.5□□□□□ -1.05
AL049539.1-201ENST00000611964 GGT6Q6P531 493 aa8.5□□□□□ -1.05
AL049539.1-201ENST00000611964 UPF1Q92900 1129 aaKnown RBP eCLIP8.5□□□□□ -1.05
AL049539.1-201ENST00000611964 CCDC18Q5T9S5 1454 aa8.5□□□□□ -1.05
AL049539.1-201ENST00000611964 KDM5DQ9BY66 1539 aa8.49□□□□□ -1.05
AL049539.1-201ENST00000611964 PIP4P2Q8N4L2 257 aa8.49□□□□□ -1.05
AL049539.1-201ENST00000611964 ATP1B4Q9UN42 357 aaPredicted RBP8.49□□□□□ -1.05
AL049539.1-201ENST00000611964 MIA2Q96PC5 1412 aa8.48□□□□□ -1.05
AL049539.1-201ENST00000611964 LRRIQ1Q96JM4 1722 aa8.48□□□□□ -1.05
AL049539.1-201ENST00000611964 ZC3H13Q5T200 1668 aaKnown RBP8.47□□□□□ -1.05
AL049539.1-201ENST00000611964 LRRC9Q6ZRR7 1453 aa8.47□□□□□ -1.05
AL049539.1-201ENST00000611964 ARHGAP35Q9NRY4 1499 aa8.47□□□□□ -1.05
AL049539.1-201ENST00000611964 FBXO31Q5XUX0 539 aaPredicted RBP8.46□□□□□ -1.06
AL049539.1-201ENST00000611964 CDK12Q9NYV4 1490 aaPredicted RBP8.45□□□□□ -1.06
AL049539.1-201ENST00000611964 XIRP1Q702N8 1843 aaKnown RBP8.45□□□□□ -1.06
AL049539.1-201ENST00000611964 GPATCH8Q9UKJ3 1502 aaKnown RBP8.45□□□□□ -1.06
AL049539.1-201ENST00000611964 DHX29Q7Z478 1369 aaKnown RBP8.45□□□□□ -1.06
AL049539.1-201ENST00000611964 JCADQ9P266 1359 aa8.45□□□□□ -1.06
AL049539.1-201ENST00000611964 RTEL1-TNFRSF6BF6WH68 1400 aa8.45□□□□□ -1.06
AL049539.1-201ENST00000611964 SCAF11Q99590 1463 aaKnown RBP8.45□□□□□ -1.06
AL049539.1-201ENST00000611964 ROBO1Q9Y6N7 1651 aa8.44□□□□□ -1.06
AL049539.1-201ENST00000611964 SPDYE2BA6NHP3 402 aa8.44□□□□□ -1.06
AL049539.1-201ENST00000611964 SPDYE6P0CI01 402 aa8.44□□□□□ -1.06
AL049539.1-201ENST00000611964 HNRNPMP52272 730 aaKnown RBP eCLIP8.44□□□□□ -1.061e-13■■■■□ 21.2
AL049539.1-201ENST00000611964 SPDYE2Q495Y8 402 aa8.44□□□□□ -1.06
AL049539.1-201ENST00000611964 ZNF772Q68DY9 489 aaPredicted RBP8.43□□□□□ -1.06
AL049539.1-201ENST00000611964 ZNF777Q9ULD5 760 aaPredicted RBP8.43□□□□□ -1.06
AL049539.1-201ENST00000611964 CASKIN1Q8WXD9 1431 aa8.43□□□□□ -1.06
AL049539.1-201ENST00000611964 FXR2P51116 673 aaKnown RBP eCLIP8.42□□□□□ -1.06
AL049539.1-201ENST00000611964 SLIT1O75093 1534 aa8.41□□□□□ -1.06
AL049539.1-201ENST00000611964 ARHGAP23Q9P227 1491 aa8.41□□□□□ -1.06
AL049539.1-201ENST00000611964 FGD6Q6ZV73 1430 aa8.41□□□□□ -1.06
AL049539.1-201ENST00000611964 WASHC2CQ9Y4E1 1318 aa8.41□□□□□ -1.06
AL049539.1-201ENST00000611964 MAP3K1Q13233 1512 aa8.4□□□□□ -1.06
AL049539.1-201ENST00000611964 TMEM94Q12767 1356 aa8.4□□□□□ -1.06
AL049539.1-201ENST00000611964 SPATA31A6Q5VVP1 1343 aa8.4□□□□□ -1.06
AL049539.1-201ENST00000611964 CFDP1Q9UEE9 299 aaPredicted RBP8.4□□□□□ -1.06
AL049539.1-201ENST00000611964 SRCAPQ6ZRS2 3230 aa8.4□□□□□ -1.07
AL049539.1-201ENST00000611964 PHLPP1O60346 1717 aa8.4□□□□□ -1.07
AL049539.1-201ENST00000611964 UBR1Q8IWV7 1749 aa8.4□□□□□ -1.07
AL049539.1-201ENST00000611964 ERVK-7P63135 1459 aa8.39□□□□□ -1.07
AL049539.1-201ENST00000611964 MBD5Q9P267 1494 aa8.39□□□□□ -1.07
AL049539.1-201ENST00000611964 KIF3BO15066 747 aa8.39□□□□□ -1.07
AL049539.1-201ENST00000611964 ABCC3O15438 1527 aa8.39□□□□□ -1.07
AL049539.1-201ENST00000611964 NKTRP30414 1462 aaKnown RBP8.38□□□□□ -1.07
AL049539.1-201ENST00000611964 FYCO1Q9BQS8 1478 aa8.38□□□□□ -1.07
AL049539.1-201ENST00000611964 CCNB3Q8WWL7 1395 aa8.38□□□□□ -1.07
AL049539.1-201ENST00000611964 TRIM52Q96A61 297 aa8.38□□□□□ -1.07
AL049539.1-201ENST00000611964 LRP6O75581 1613 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms