RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 KIF15Q9NS87 1388 aa17.76■□□□□ 0.43
CCDC12-209ENST00000604164 WASHC2CQ9Y4E1 1318 aa17.75■□□□□ 0.43
CCDC12-209ENST00000604164 CLTCQ00610 1675 aaKnown RBP17.75■□□□□ 0.43
CCDC12-209ENST00000604164 EIF2AK4Q9P2K8 1649 aaKnown RBP17.75■□□□□ 0.43
CCDC12-209ENST00000604164 KDM5DQ9BY66 1539 aa17.74■□□□□ 0.43
CCDC12-209ENST00000604164 ERBINQ96RT1 1412 aa17.73■□□□□ 0.43
CCDC12-209ENST00000604164 RRP7BPQ9NSQ0 103 aa17.73■□□□□ 0.43
CCDC12-209ENST00000604164 HSPA2P54652 639 aa17.72■□□□□ 0.43
CCDC12-209ENST00000604164 RNF17Q9BXT8 1623 aaKnown RBP17.71■□□□□ 0.43
CCDC12-209ENST00000604164 CHIC2Q9UKJ5 165 aa17.7■□□□□ 0.42
CCDC12-209ENST00000604164 PTPRKQ15262 1439 aa17.7■□□□□ 0.42
CCDC12-209ENST00000604164 NCOA1Q15788 1441 aa17.69■□□□□ 0.42
CCDC12-209ENST00000604164 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCDC12-209ENST00000604164 DMRT2Q9Y5R5 561 aa17.68■□□□□ 0.42
CCDC12-209ENST00000604164 ADGRL2O95490 1459 aa17.68■□□□□ 0.42
CCDC12-209ENST00000604164 PZPP20742 1482 aa17.67■□□□□ 0.42
CCDC12-209ENST00000604164 ZC3H13Q5T200 1668 aaKnown RBP17.67■□□□□ 0.42
CCDC12-209ENST00000604164 KANK1Q14678 1352 aa17.66■□□□□ 0.42
CCDC12-209ENST00000604164 PPARGC1BQ86YN6 1023 aaKnown RBP17.65■□□□□ 0.42
CCDC12-209ENST00000604164 ABCC3O15438 1527 aa17.63■□□□□ 0.41
CCDC12-209ENST00000604164 TNRQ92752 1358 aa17.63■□□□□ 0.41
CCDC12-209ENST00000604164 ROCK1Q13464 1354 aa17.62■□□□□ 0.41
CCDC12-209ENST00000604164 PRDM15P57071 1507 aaPredicted RBP17.62■□□□□ 0.41
CCDC12-209ENST00000604164 MYO3AQ8NEV4 1616 aa17.61■□□□□ 0.41
CCDC12-209ENST00000604164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.411e-7■■□□□ 13.2
CCDC12-209ENST00000604164 ANKRD50Q9ULJ7 1429 aa17.6■□□□□ 0.41
CCDC12-209ENST00000604164 MROH1Q8NDA8 1641 aa17.6■□□□□ 0.41
CCDC12-209ENST00000604164 ZNF142P52746 1687 aaPredicted RBP17.59■□□□□ 0.41
CCDC12-209ENST00000604164 CEP170BQ9Y4F5 1589 aaPredicted RBP17.59■□□□□ 0.41
CCDC12-209ENST00000604164 FBXO31Q5XUX0 539 aaPredicted RBP17.59■□□□□ 0.41
CCDC12-209ENST00000604164 DEPDC5O75140 1603 aa17.58■□□□□ 0.41
CCDC12-209ENST00000604164 A2ML1A8K2U0 1454 aa17.58■□□□□ 0.41
CCDC12-209ENST00000604164 NLRP1Q9C000 1473 aa17.58■□□□□ 0.41
CCDC12-209ENST00000604164 ARHGAP31Q2M1Z3 1444 aa17.57■□□□□ 0.4
CCDC12-209ENST00000604164 RRBP1Q9P2E9 1410 aaKnown RBP17.57■□□□□ 0.4
CCDC12-209ENST00000604164 PKD2Q13563 968 aa17.57■□□□□ 0.4
CCDC12-209ENST00000604164 PLA2R1Q13018 1463 aa17.56■□□□□ 0.4
CCDC12-209ENST00000604164 ITGAEP38570 1179 aa17.56■□□□□ 0.4
CCDC12-209ENST00000604164 CAMSAP1Q5T5Y3 1602 aa17.56■□□□□ 0.4
CCDC12-209ENST00000604164 PTPRTO14522 1441 aa17.55■□□□□ 0.4
CCDC12-209ENST00000604164 SPATA31D1Q6ZQQ2 1576 aa17.54■□□□□ 0.4
CCDC12-209ENST00000604164 LMTK2Q8IWU2 1503 aa17.54■□□□□ 0.4
CCDC12-209ENST00000604164 THEMISQ8N1K5 641 aaPredicted RBP17.54■□□□□ 0.4
CCDC12-209ENST00000604164 CEP152O94986 1710 aa17.54■□□□□ 0.4
CCDC12-209ENST00000604164 ERVK-7P63135 1459 aa17.54■□□□□ 0.4
CCDC12-209ENST00000604164 STRCQ7RTU9 1775 aa17.53■□□□□ 0.4
CCDC12-209ENST00000604164 VWDEQ8N2E2 1590 aa17.52■□□□□ 0.39
CCDC12-209ENST00000604164 UGGT1Q9NYU2 1555 aa17.49■□□□□ 0.39
CCDC12-209ENST00000604164 NCKAP5LQ9HCH0 1330 aa17.47■□□□□ 0.39
CCDC12-209ENST00000604164 ANKLE2Q86XL3 938 aa17.47■□□□□ 0.39
CCDC12-209ENST00000604164 RPRD2Q5VT52 1461 aaKnown RBP17.47■□□□□ 0.39
CCDC12-209ENST00000604164 EFCAB6Q5THR3 1501 aa17.46■□□□□ 0.39
CCDC12-209ENST00000604164 UNC13BO14795 1591 aa17.45■□□□□ 0.38
CCDC12-209ENST00000604164 CERKQ8TCT0 537 aa17.43■□□□□ 0.38
CCDC12-209ENST00000604164 SLC52A1Q9NWF4 448 aa17.43■□□□□ 0.38
CCDC12-209ENST00000604164 STAG3Q9UJ98 1225 aa17.43■□□□□ 0.38
CCDC12-209ENST00000604164 TET3O43151 1660 aa17.42■□□□□ 0.38
CCDC12-209ENST00000604164 NUP155O75694 1391 aa17.42■□□□□ 0.38
CCDC12-209ENST00000604164 FBXO41Q8TF61 875 aa17.42■□□□□ 0.38
CCDC12-209ENST00000604164 CFAP65Q6ZU64 1925 aaKnown RBP17.41■□□□□ 0.38
CCDC12-209ENST00000604164 NOS1P29475 1434 aa17.4■□□□□ 0.38
CCDC12-209ENST00000604164 ILDR1Q86SU0 546 aaPredicted RBP17.4■□□□□ 0.38
CCDC12-209ENST00000604164 POLR1AO95602 1720 aaPredicted RBP17.39■□□□□ 0.37
CCDC12-209ENST00000604164 EID1Q9Y6B2 187 aa17.39■□□□□ 0.37
CCDC12-209ENST00000604164 IQGAP3Q86VI3 1631 aa17.39■□□□□ 0.37
CCDC12-209ENST00000604164 GCC2Q8IWJ2 1684 aa17.39■□□□□ 0.37
CCDC12-209ENST00000604164 HFM1A2PYH4 1435 aa17.38■□□□□ 0.37
CCDC12-209ENST00000604164 NAIPQ13075 1403 aa17.38■□□□□ 0.37
CCDC12-209ENST00000604164 KDM5AP29375 1690 aaKnown RBP17.37■□□□□ 0.37
CCDC12-209ENST00000604164 IDI1Q13907 227 aa17.37■□□□□ 0.37
CCDC12-209ENST00000604164 UBR1Q8IWV7 1749 aa17.37■□□□□ 0.37
CCDC12-209ENST00000604164 MED14O60244 1454 aa17.37■□□□□ 0.37
CCDC12-209ENST00000604164 NPHP4O75161 1426 aaPredicted RBP17.36■□□□□ 0.37
CCDC12-209ENST00000604164 SLIT1O75093 1534 aa17.35■□□□□ 0.37
CCDC12-209ENST00000604164 SYNMO15061 1565 aa17.35■□□□□ 0.37
CCDC12-209ENST00000604164 PIK3C2BO00750 1634 aa17.34■□□□□ 0.37
CCDC12-209ENST00000604164 TXNDC2Q86VQ3 553 aa17.34■□□□□ 0.37
CCDC12-209ENST00000604164 NEURL4Q96JN8 1562 aa17.34■□□□□ 0.37
CCDC12-209ENST00000604164 SCAF11Q99590 1463 aaKnown RBP17.34■□□□□ 0.37
CCDC12-209ENST00000604164 ACIN1Q9UKV3 1341 aaKnown RBP17.34■□□□□ 0.37
CCDC12-209ENST00000604164 IQSEC2Q5JU85 1478 aa17.33■□□□□ 0.37
CCDC12-209ENST00000604164 ARHGAP23Q9P227 1491 aa17.33■□□□□ 0.37
CCDC12-209ENST00000604164 TMEM2Q9UHN6 1383 aa17.33■□□□□ 0.36
CCDC12-209ENST00000604164 HDGFP51858 240 aaKnown RBP17.33■□□□□ 0.36
CCDC12-209ENST00000604164 ZNF335Q9H4Z2 1342 aaPredicted RBP17.32■□□□□ 0.36
CCDC12-209ENST00000604164 LTBP4Q8N2S1 1624 aa17.32■□□□□ 0.36
CCDC12-209ENST00000604164 ADGRB3O60242 1522 aa17.31■□□□□ 0.36
CCDC12-209ENST00000604164 E9PCH4 1651 aa17.3■□□□□ 0.36
CCDC12-209ENST00000604164 IQGAP1P46940 1657 aa17.3■□□□□ 0.36
CCDC12-209ENST00000604164 TRIM52Q96A61 297 aa17.3■□□□□ 0.36
CCDC12-209ENST00000604164 LTKP29376 864 aa17.28■□□□□ 0.36
CCDC12-209ENST00000604164 CPS1P31327 1500 aa17.27■□□□□ 0.36
CCDC12-209ENST00000604164 CHGAP10645 457 aaKnown RBP17.26■□□□□ 0.35
CCDC12-209ENST00000604164 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCDC12-209ENST00000604164 SLC4A1APQ9BWU0 796 aaKnown RBP17.24■□□□□ 0.35
CCDC12-209ENST00000604164 PPP1R15AO75807 674 aaPredicted RBP17.23■□□□□ 0.35
CCDC12-209ENST00000604164 TMEM131LA2VDJ0 1609 aa17.22■□□□□ 0.35
CCDC12-209ENST00000604164 RIMS2Q9UQ26 1411 aa17.21■□□□□ 0.35
CCDC12-209ENST00000604164 BCANQ96GW7 911 aa17.21■□□□□ 0.35
CCDC12-209ENST00000604164 SPHKAPQ2M3C7 1700 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms