RNA–Protein interactions for RNA: ENST00000602540.5

PHLDA1-202, Transcript of pleckstrin homology like domain family A member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHLDA1, Length 5,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA1-202ENST00000602540 PHF14O94880 888 aa23.25■■□□□ 1.31
PHLDA1-202ENST00000602540 L3MBTL2Q969R5 705 aa23.25■■□□□ 1.31
PHLDA1-202ENST00000602540 KIF16BQ96L93 1317 aa23.24■■□□□ 1.31
PHLDA1-202ENST00000602540 NOL8Q76FK4 1167 aaKnown RBP23.24■■□□□ 1.31
PHLDA1-202ENST00000602540 HNRNPMP52272 730 aaKnown RBP eCLIP23.23■■□□□ 1.31
PHLDA1-202ENST00000602540 WASHC2CQ9Y4E1 1318 aa23.23■■□□□ 1.31
PHLDA1-202ENST00000602540 GOLGA6L1Q8N7Z2 621 aa23.22■■□□□ 1.31
PHLDA1-202ENST00000602540 TOMM22Q9NS69 142 aa23.21■■□□□ 1.31
PHLDA1-202ENST00000602540 KIF15Q9NS87 1388 aa23.21■■□□□ 1.31
PHLDA1-202ENST00000602540 FOXD4L1Q9NU39 408 aa23.2■■□□□ 1.31
PHLDA1-202ENST00000602540 CCDC88BA6NC98 1476 aa23.2■■□□□ 1.3
PHLDA1-202ENST00000602540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.2■■□□□ 1.3
PHLDA1-202ENST00000602540 TDRD9Q8NDG6 1382 aaKnown RBP23.19■■□□□ 1.3
PHLDA1-202ENST00000602540 NUTM2DQ5VT03 806 aaPredicted RBP23.19■■□□□ 1.3
PHLDA1-202ENST00000602540 A0A0U1RQG5 324 aaPredicted RBP23.18■■□□□ 1.3
PHLDA1-202ENST00000602540 FRAT2O75474 233 aaPredicted RBP23.18■■□□□ 1.3
PHLDA1-202ENST00000602540 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
PHLDA1-202ENST00000602540 AMER1Q5JTC6 1135 aaPredicted RBP23.18■■□□□ 1.3
PHLDA1-202ENST00000602540 LTV1Q96GA3 475 aaPredicted RBP23.18■■□□□ 1.3
PHLDA1-202ENST00000602540 CCDC18Q5T9S5 1454 aa23.18■■□□□ 1.3
PHLDA1-202ENST00000602540 SF3A1Q15459 793 aaKnown RBP23.17■■□□□ 1.3
PHLDA1-202ENST00000602540 CREBRFQ8IUR6 639 aa23.17■■□□□ 1.3
PHLDA1-202ENST00000602540 ARID3AQ99856 593 aa23.17■■□□□ 1.3
PHLDA1-202ENST00000602540 TPM3P06753 285 aa23.17■■□□□ 1.3
PHLDA1-202ENST00000602540 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
PHLDA1-202ENST00000602540 MYBBP1AQ9BQG0 1328 aaKnown RBP23.16■■□□□ 1.3
PHLDA1-202ENST00000602540 GTF2E1P29083 439 aaPredicted RBP23.16■■□□□ 1.3
PHLDA1-202ENST00000602540 CHMP4CQ96CF2 233 aa23.15■■□□□ 1.3
PHLDA1-202ENST00000602540 MARCH6O60337 910 aa23.15■■□□□ 1.3
PHLDA1-202ENST00000602540 DDX11L8A8MPP1 907 aa23.14■■□□□ 1.3
PHLDA1-202ENST00000602540 SMARCA2P51531 1590 aa23.14■■□□□ 1.3
PHLDA1-202ENST00000602540 CEP89Q96ST8 783 aa23.13■■□□□ 1.29
PHLDA1-202ENST00000602540 TRAK1Q9UPV9 953 aa23.13■■□□□ 1.29
PHLDA1-202ENST00000602540 H3BQV1 296 aa23.11■■□□□ 1.29
PHLDA1-202ENST00000602540 IFFO2Q5TF58 517 aa23.11■■□□□ 1.29
PHLDA1-202ENST00000602540 CENPQQ7L2Z9 268 aaPredicted RBP23.11■■□□□ 1.29
PHLDA1-202ENST00000602540 PRM3Q9NNZ6 103 aa23.1■■□□□ 1.29
PHLDA1-202ENST00000602540 TNNT3P45378 269 aaPredicted RBP23.1■■□□□ 1.29
PHLDA1-202ENST00000602540 UACAQ9BZF9 1416 aa23.1■■□□□ 1.29
PHLDA1-202ENST00000602540 VPS53Q5VIR6 699 aa23.09■■□□□ 1.29
PHLDA1-202ENST00000602540 TSHZ2Q9NRE2 1034 aa23.09■■□□□ 1.29
PHLDA1-202ENST00000602540 RRP7AQ9Y3A4 280 aaKnown RBP23.09■■□□□ 1.29
PHLDA1-202ENST00000602540 PDE4CQ08493 712 aa23.09■■□□□ 1.29
PHLDA1-202ENST00000602540 RILPL2Q969X0 211 aa23.08■■□□□ 1.29
PHLDA1-202ENST00000602540 FOXD4L5Q5VV16 416 aaPredicted RBP23.08■■□□□ 1.28
PHLDA1-202ENST00000602540 FOXD4L4Q8WXT5 416 aaPredicted RBP23.08■■□□□ 1.28
PHLDA1-202ENST00000602540 ATP6V1DQ9Y5K8 247 aa23.08■■□□□ 1.28
PHLDA1-202ENST00000602540 CCDC144AA2RUR9 1427 aa23.08■■□□□ 1.28
PHLDA1-202ENST00000602540 NUTM2FA1L443 756 aa23.07■■□□□ 1.28
PHLDA1-202ENST00000602540 PANK3Q9H999 370 aa23.07■■□□□ 1.28
PHLDA1-202ENST00000602540 C1orf141Q5JVX7 400 aa23.07■■□□□ 1.28
PHLDA1-202ENST00000602540 FAM184AQ8NB25 1140 aa23.07■■□□□ 1.28
PHLDA1-202ENST00000602540 FHOD3Q2V2M9 1422 aa23.07■■□□□ 1.28
PHLDA1-202ENST00000602540 RAPGEF2Q9Y4G8 1499 aa23.07■■□□□ 1.28
PHLDA1-202ENST00000602540 COG3Q96JB2 828 aa23.07■■□□□ 1.28
PHLDA1-202ENST00000602540 TPD52L1Q16890 204 aaPredicted RBP23.06■■□□□ 1.28
PHLDA1-202ENST00000602540 E9PSI1 815 aa23.06■■□□□ 1.28
PHLDA1-202ENST00000602540 ZKSCAN2Q63HK3 967 aa23.06■■□□□ 1.28
PHLDA1-202ENST00000602540 ANKRD45Q5TZF3 282 aa23.06■■□□□ 1.28
PHLDA1-202ENST00000602540 CGNL1Q0VF96 1302 aa23.05■■□□□ 1.28
PHLDA1-202ENST00000602540 AKAP17AQ02040 695 aaKnown RBP23.04■■□□□ 1.28
PHLDA1-202ENST00000602540 FAM161AQ3B820 660 aa23.04■■□□□ 1.28
PHLDA1-202ENST00000602540 ST20-MTHFSA0A0A6YYL1 179 aa23.04■■□□□ 1.28
PHLDA1-202ENST00000602540 TSR1Q2NL82 804 aaKnown RBP23.03■■□□□ 1.28
PHLDA1-202ENST00000602540 PES1O00541 588 aaKnown RBP23.03■■□□□ 1.28
PHLDA1-202ENST00000602540 LRRFIP1Q32MZ4 808 aaKnown RBP23.03■■□□□ 1.28
PHLDA1-202ENST00000602540 EVC2Q86UK5 1308 aa23.02■■□□□ 1.28
PHLDA1-202ENST00000602540 SKOR2Q2VWA4 1001 aaPredicted RBP23.02■■□□□ 1.28
PHLDA1-202ENST00000602540 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
PHLDA1-202ENST00000602540 GOLGA6L19H0YKK7 550 aa23.01■■□□□ 1.27
PHLDA1-202ENST00000602540 ELL2O00472 640 aaPredicted RBP23.01■■□□□ 1.27
PHLDA1-202ENST00000602540 SYNE3Q6ZMZ3 975 aa23.01■■□□□ 1.27
PHLDA1-202ENST00000602540 VGFO15240 615 aaPredicted RBP23■■□□□ 1.27
PHLDA1-202ENST00000602540 TPM2P07951 284 aa23■■□□□ 1.27
PHLDA1-202ENST00000602540 DIAPH3Q9NSV4 1193 aa22.99■■□□□ 1.27
PHLDA1-202ENST00000602540 DDX49Q9Y6V7 483 aaKnown RBP22.99■■□□□ 1.27
PHLDA1-202ENST00000602540 TEFQ10587 303 aa22.99■■□□□ 1.27
PHLDA1-202ENST00000602540 NEXNQ0ZGT2 675 aa22.99■■□□□ 1.27
PHLDA1-202ENST00000602540 BCL2L13Q9BXK5 485 aa22.98■■□□□ 1.27
PHLDA1-202ENST00000602540 TPM1P09493 284 aa22.98■■□□□ 1.27
PHLDA1-202ENST00000602540 BECN2A8MW95 431 aa22.98■■□□□ 1.27
PHLDA1-202ENST00000602540 RUFY2Q8WXA3 655 aa22.98■■□□□ 1.27
PHLDA1-202ENST00000602540 PDE4AP27815 886 aa22.96■■□□□ 1.27
PHLDA1-202ENST00000602540 CPLX2Q6PUV4 134 aaKnown RBP22.96■■□□□ 1.27
PHLDA1-202ENST00000602540 RRP1P56182 461 aaKnown RBP22.96■■□□□ 1.27
PHLDA1-202ENST00000602540 TTC5Q8N0Z6 440 aa22.96■■□□□ 1.27
PHLDA1-202ENST00000602540 AMOTL1Q8IY63 956 aa22.95■■□□□ 1.26
PHLDA1-202ENST00000602540 EVA1CP58658 441 aa22.94■■□□□ 1.26
PHLDA1-202ENST00000602540 NOL10Q9BSC4 688 aaKnown RBP22.94■■□□□ 1.26
PHLDA1-202ENST00000602540 JPH4Q96JJ6 628 aa22.93■■□□□ 1.26
PHLDA1-202ENST00000602540 REC8O95072 547 aa22.93■■□□□ 1.26
PHLDA1-202ENST00000602540 MCTP1Q6DN14 999 aa22.93■■□□□ 1.26
PHLDA1-202ENST00000602540 C9orf78Q9NZ63 289 aaPredicted RBP22.93■■□□□ 1.26
PHLDA1-202ENST00000602540 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.93■■□□□ 1.26
PHLDA1-202ENST00000602540 PLIN1O60240 522 aa22.92■■□□□ 1.26
PHLDA1-202ENST00000602540 ZKSCAN1P17029 563 aaPredicted RBP22.92■■□□□ 1.26
PHLDA1-202ENST00000602540 TRIM29Q14134 588 aa22.92■■□□□ 1.26
PHLDA1-202ENST00000602540 CRBNQ96SW2 442 aa22.92■■□□□ 1.26
PHLDA1-202ENST00000602540 DDX19BQ9UMR2 479 aa22.92■■□□□ 1.26
PHLDA1-202ENST00000602540 COG6Q9Y2V7 657 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms