RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 KDM5DQ9BY66 1539 aa27.36■■□□□ 1.97
SSBP4-212ENST00000601919 DEPDC5O75140 1603 aa27.34■■□□□ 1.97
SSBP4-212ENST00000601919 KIF3BO15066 747 aa27.34■■□□□ 1.97
SSBP4-212ENST00000601919 NUP155O75694 1391 aa27.34■■□□□ 1.97
SSBP4-212ENST00000601919 CLSPNQ9HAW4 1339 aa27.32■■□□□ 1.96
SSBP4-212ENST00000601919 RNF17Q9BXT8 1623 aaKnown RBP27.31■■□□□ 1.96
SSBP4-212ENST00000601919 KANK1Q14678 1352 aa27.3■■□□□ 1.96
SSBP4-212ENST00000601919 MPHOSPH9Q99550 1183 aa27.29■■□□□ 1.96
SSBP4-212ENST00000601919 IQGAP3Q86VI3 1631 aa27.29■■□□□ 1.96
SSBP4-212ENST00000601919 AGLP35573 1532 aa27.28■■□□□ 1.96
SSBP4-212ENST00000601919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.28■■□□□ 1.96
SSBP4-212ENST00000601919 SLC4A1APQ9BWU0 796 aaKnown RBP27.28■■□□□ 1.96
SSBP4-212ENST00000601919 PZPP20742 1482 aa27.27■■□□□ 1.96
SSBP4-212ENST00000601919 PRDM15P57071 1507 aaPredicted RBP27.26■■□□□ 1.96
SSBP4-212ENST00000601919 FAM135AQ9P2D6 1515 aa27.26■■□□□ 1.95
SSBP4-212ENST00000601919 MROH1Q8NDA8 1641 aa27.22■■□□□ 1.95
SSBP4-212ENST00000601919 VWDEQ8N2E2 1590 aa27.21■■□□□ 1.95
SSBP4-212ENST00000601919 GGT6Q6P531 493 aa27.19■■□□□ 1.94
SSBP4-212ENST00000601919 PPP6R1Q9UPN7 881 aa27.16■■□□□ 1.94
SSBP4-212ENST00000601919 TET3O43151 1660 aa27.16■■□□□ 1.94
SSBP4-212ENST00000601919 ZC3H13Q5T200 1668 aaKnown RBP27.15■■□□□ 1.94
SSBP4-212ENST00000601919 ZEB1P37275 1124 aaPredicted RBP27.15■■□□□ 1.94
SSBP4-212ENST00000601919 PKD2Q13563 968 aa27.15■■□□□ 1.94
SSBP4-212ENST00000601919 LMTK2Q8IWU2 1503 aa27.14■■□□□ 1.94
SSBP4-212ENST00000601919 SIGLEC1Q9BZZ2 1709 aa27.13■■□□□ 1.93
SSBP4-212ENST00000601919 CEP152O94986 1710 aa27.12■■□□□ 1.93
SSBP4-212ENST00000601919 ARID4BQ4LE39 1312 aaPredicted RBP27.12■■□□□ 1.93
SSBP4-212ENST00000601919 WASHC2CQ9Y4E1 1318 aa27.12■■□□□ 1.93
SSBP4-212ENST00000601919 ABCC3O15438 1527 aa27.09■■□□□ 1.93
SSBP4-212ENST00000601919 EFCAB6Q5THR3 1501 aa27.06■■□□□ 1.92
SSBP4-212ENST00000601919 FOXD1Q16676 465 aa27.06■■□□□ 1.92
SSBP4-212ENST00000601919 ANKRD30BQ9BXX2 1392 aa27.06■■□□□ 1.92
SSBP4-212ENST00000601919 E9PCH4 1651 aa27.05■■□□□ 1.92
SSBP4-212ENST00000601919 CAMSAP1Q5T5Y3 1602 aa27.04■■□□□ 1.92
SSBP4-212ENST00000601919 RPRD2Q5VT52 1461 aaKnown RBP27.03■■□□□ 1.92
SSBP4-212ENST00000601919 ESF1Q9H501 851 aaKnown RBP27.03■■□□□ 1.92
SSBP4-212ENST00000601919 MLECQ14165 292 aa27.02■■□□□ 1.92
SSBP4-212ENST00000601919 ARHGAP31Q2M1Z3 1444 aa26.99■■□□□ 1.91
SSBP4-212ENST00000601919 SPHKAPQ2M3C7 1700 aa26.98■■□□□ 1.91
SSBP4-212ENST00000601919 CLTCQ00610 1675 aaKnown RBP26.98■■□□□ 1.91
SSBP4-212ENST00000601919 CNTLNQ9NXG0 1405 aa26.97■■□□□ 1.91
SSBP4-212ENST00000601919 NEUROD1Q13562 356 aa26.96■■□□□ 1.91
SSBP4-212ENST00000601919 SIN3AQ96ST3 1273 aa26.96■■□□□ 1.91
SSBP4-212ENST00000601919 TIMELESSQ9UNS1 1208 aa26.94■■□□□ 1.9
SSBP4-212ENST00000601919 PTPRTO14522 1441 aa26.93■■□□□ 1.9
SSBP4-212ENST00000601919 NPATQ14207 1427 aa26.93■■□□□ 1.9
SSBP4-212ENST00000601919 CCDC144AA2RUR9 1427 aa26.92■■□□□ 1.9
SSBP4-212ENST00000601919 TRPM2O94759 1503 aa26.92■■□□□ 1.9
SSBP4-212ENST00000601919 MROH2AA6NES4 1674 aa26.91■■□□□ 1.9
SSBP4-212ENST00000601919 FER1L4A9Z1Z3 1794 aa26.9■■□□□ 1.9
SSBP4-212ENST00000601919 CFAP65Q6ZU64 1925 aaKnown RBP26.9■■□□□ 1.9
SSBP4-212ENST00000601919 PLA2R1Q13018 1463 aa26.89■■□□□ 1.9
SSBP4-212ENST00000601919 TONSLQ96HA7 1378 aa26.88■■□□□ 1.89
SSBP4-212ENST00000601919 PREX1Q8TCU6 1659 aa26.85■■□□□ 1.89
SSBP4-212ENST00000601919 ZMYM3Q14202 1370 aa26.84■■□□□ 1.89
SSBP4-212ENST00000601919 NOS1P29475 1434 aa26.83■■□□□ 1.89
SSBP4-212ENST00000601919 CLTCL1P53675 1640 aa26.8■■□□□ 1.88
SSBP4-212ENST00000601919 ADAMTSL3P82987 1691 aa26.79■■□□□ 1.88
SSBP4-212ENST00000601919 ERVK-7P63135 1459 aa26.79■■□□□ 1.88
SSBP4-212ENST00000601919 KIF1BO60333 1816 aa26.78■■□□□ 1.88
SSBP4-212ENST00000601919 SPATA31D1Q6ZQQ2 1576 aa26.77■■□□□ 1.88
SSBP4-212ENST00000601919 MADDQ8WXG6 1647 aa26.76■■□□□ 1.87
SSBP4-212ENST00000601919 SLC52A1Q9NWF4 448 aa26.76■■□□□ 1.87
SSBP4-212ENST00000601919 SYNMO15061 1565 aa26.75■■□□□ 1.87
SSBP4-212ENST00000601919 C3P01024 1663 aa26.74■■□□□ 1.87
SSBP4-212ENST00000601919 PIK3C2BO00750 1634 aa26.74■■□□□ 1.87
SSBP4-212ENST00000601919 NEURL4Q96JN8 1562 aa26.74■■□□□ 1.87
SSBP4-212ENST00000601919 RIMS1Q86UR5 1692 aaKnown RBP26.73■■□□□ 1.87
SSBP4-212ENST00000601919 FBXO31Q5XUX0 539 aaPredicted RBP26.72■■□□□ 1.87
SSBP4-212ENST00000601919 UGGT1Q9NYU2 1555 aa26.71■■□□□ 1.87
SSBP4-212ENST00000601919 L3MBTL2Q969R5 705 aa26.7■■□□□ 1.86
SSBP4-212ENST00000601919 SPATA31E1Q6ZUB1 1445 aa26.68■■□□□ 1.86
SSBP4-212ENST00000601919 PPP1R15AO75807 674 aaPredicted RBP26.66■■□□□ 1.86
SSBP4-212ENST00000601919 TNRQ92752 1358 aa26.66■■□□□ 1.86
SSBP4-212ENST00000601919 IDI1Q13907 227 aa26.64■■□□□ 1.86
SSBP4-212ENST00000601919 RGL3Q3MIN7 710 aa26.64■■□□□ 1.86
SSBP4-212ENST00000601919 ADGRB3O60242 1522 aa26.64■■□□□ 1.85
SSBP4-212ENST00000601919 CHGAP10645 457 aaKnown RBP26.62■■□□□ 1.85
SSBP4-212ENST00000601919 STAC3Q96MF2 364 aa26.62■■□□□ 1.85
SSBP4-212ENST00000601919 CEBPAP49715 358 aaPredicted RBP26.61■■□□□ 1.85
SSBP4-212ENST00000601919 DCAF11Q8TEB1 546 aa26.59■■□□□ 1.85
SSBP4-212ENST00000601919 NLRP1Q9C000 1473 aa26.59■■□□□ 1.85
SSBP4-212ENST00000601919 TMEM131LA2VDJ0 1609 aa26.58■■□□□ 1.85
SSBP4-212ENST00000601919 STAG3Q9UJ98 1225 aa26.58■■□□□ 1.85
SSBP4-212ENST00000601919 RPGRIP1LQ68CZ1 1315 aa26.58■■□□□ 1.85
SSBP4-212ENST00000601919 KDM5AP29375 1690 aaKnown RBP26.57■■□□□ 1.84
SSBP4-212ENST00000601919 ZNF326Q5BKZ1 582 aaKnown RBP26.57■■□□□ 1.84
SSBP4-212ENST00000601919 PLPPR3Q6T4P5 718 aa26.56■■□□□ 1.84
SSBP4-212ENST00000601919 PTPRMP28827 1452 aa26.55■■□□□ 1.84
SSBP4-212ENST00000601919 SETD1BQ9UPS6 1966 aaKnown RBP26.55■■□□□ 1.84
SSBP4-212ENST00000601919 MYO5BQ9ULV0 1848 aa26.54■■□□□ 1.84
SSBP4-212ENST00000601919 KDM2AQ9Y2K7 1162 aa26.53■■□□□ 1.84
SSBP4-212ENST00000601919 UHRF1BP1Q6BDS2 1440 aa26.53■■□□□ 1.84
SSBP4-212ENST00000601919 IFT172Q9UG01 1749 aa26.53■■□□□ 1.84
SSBP4-212ENST00000601919 PPLO60437 1756 aa26.51■■□□□ 1.83
SSBP4-212ENST00000601919 MYO3AQ8NEV4 1616 aa26.5■■□□□ 1.83
SSBP4-212ENST00000601919 MYOM2P54296 1465 aa26.49■■□□□ 1.83
SSBP4-212ENST00000601919 A2ML1A8K2U0 1454 aa26.49■■□□□ 1.83
SSBP4-212ENST00000601919 UBR1Q8IWV7 1749 aa26.48■■□□□ 1.83
SSBP4-212ENST00000601919 PRAG1Q86YV5 1406 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms