RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 KIF3BO15066 747 aa32.59■■■□□ 2.81
SNRNP70-209ENST00000601065 DEPDC5O75140 1603 aa32.58■■■□□ 2.81
SNRNP70-209ENST00000601065 KDM5DQ9BY66 1539 aa32.57■■■□□ 2.81
SNRNP70-209ENST00000601065 NUP155O75694 1391 aa32.56■■■□□ 2.8
SNRNP70-209ENST00000601065 RNF17Q9BXT8 1623 aaKnown RBP32.53■■■□□ 2.8
SNRNP70-209ENST00000601065 PZPP20742 1482 aa32.53■■■□□ 2.8
SNRNP70-209ENST00000601065 MROH1Q8NDA8 1641 aa32.51■■■□□ 2.8
SNRNP70-209ENST00000601065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.51■■■□□ 2.791e-10■■□□□ 11.8
SNRNP70-209ENST00000601065 SIGLEC1Q9BZZ2 1709 aa32.51■■■□□ 2.79
SNRNP70-209ENST00000601065 AGLP35573 1532 aa32.51■■■□□ 2.79
SNRNP70-209ENST00000601065 PRDM15P57071 1507 aaPredicted RBP32.51■■■□□ 2.79
SNRNP70-209ENST00000601065 MPHOSPH9Q99550 1183 aa32.5■■■□□ 2.79
SNRNP70-209ENST00000601065 IQGAP3Q86VI3 1631 aa32.49■■■□□ 2.79
SNRNP70-209ENST00000601065 FAM135AQ9P2D6 1515 aa32.48■■■□□ 2.79
SNRNP70-209ENST00000601065 SLC4A1APQ9BWU0 796 aaKnown RBP32.47■■■□□ 2.79
SNRNP70-209ENST00000601065 VWDEQ8N2E2 1590 aa32.45■■■□□ 2.78
SNRNP70-209ENST00000601065 GGT6Q6P531 493 aa32.43■■■□□ 2.78
SNRNP70-209ENST00000601065 KANK1Q14678 1352 aa32.42■■■□□ 2.78
SNRNP70-209ENST00000601065 CLSPNQ9HAW4 1339 aa32.38■■■□□ 2.77
SNRNP70-209ENST00000601065 PKD2Q13563 968 aa32.35■■■□□ 2.77
SNRNP70-209ENST00000601065 LMTK2Q8IWU2 1503 aa32.33■■■□□ 2.77
SNRNP70-209ENST00000601065 CEP152O94986 1710 aa32.33■■■□□ 2.77
SNRNP70-209ENST00000601065 TET3O43151 1660 aa32.33■■■□□ 2.77
SNRNP70-209ENST00000601065 FOXD1Q16676 465 aa32.32■■■□□ 2.77
SNRNP70-209ENST00000601065 ARID4BQ4LE39 1312 aaPredicted RBP32.31■■■□□ 2.76
SNRNP70-209ENST00000601065 ABCC3O15438 1527 aa32.3■■■□□ 2.76
SNRNP70-209ENST00000601065 WASHC2CQ9Y4E1 1318 aa32.29■■■□□ 2.76
SNRNP70-209ENST00000601065 ZC3H13Q5T200 1668 aaKnown RBP32.29■■■□□ 2.76
SNRNP70-209ENST00000601065 PPP6R1Q9UPN7 881 aa32.27■■■□□ 2.76
SNRNP70-209ENST00000601065 ZEB1P37275 1124 aaPredicted RBP32.27■■■□□ 2.76
SNRNP70-209ENST00000601065 E9PCH4 1651 aa32.26■■■□□ 2.75
SNRNP70-209ENST00000601065 MLECQ14165 292 aa32.26■■■□□ 2.75
SNRNP70-209ENST00000601065 EFCAB6Q5THR3 1501 aa32.26■■■□□ 2.75
SNRNP70-209ENST00000601065 ANKRD30BQ9BXX2 1392 aa32.24■■■□□ 2.75
SNRNP70-209ENST00000601065 CAMSAP1Q5T5Y3 1602 aa32.22■■■□□ 2.75
SNRNP70-209ENST00000601065 CLTCQ00610 1675 aaKnown RBP32.17■■■□□ 2.74
SNRNP70-209ENST00000601065 SIN3AQ96ST3 1273 aa32.17■■■□□ 2.74
SNRNP70-209ENST00000601065 RPRD2Q5VT52 1461 aaKnown RBP32.16■■■□□ 2.74
SNRNP70-209ENST00000601065 NPATQ14207 1427 aa32.15■■■□□ 2.74
SNRNP70-209ENST00000601065 ARHGAP31Q2M1Z3 1444 aa32.14■■■□□ 2.74
SNRNP70-209ENST00000601065 PLA2R1Q13018 1463 aa32.13■■■□□ 2.73
SNRNP70-209ENST00000601065 SPHKAPQ2M3C7 1700 aa32.11■■■□□ 2.73
SNRNP70-209ENST00000601065 PTPRTO14522 1441 aa32.1■■■□□ 2.73
SNRNP70-209ENST00000601065 ESF1Q9H501 851 aaKnown RBP32.09■■■□□ 2.73
SNRNP70-209ENST00000601065 NEUROD1Q13562 356 aa32.09■■■□□ 2.73
SNRNP70-209ENST00000601065 CNTLNQ9NXG0 1405 aa32.07■■■□□ 2.72
SNRNP70-209ENST00000601065 TRPM2O94759 1503 aa32.06■■■□□ 2.72
SNRNP70-209ENST00000601065 FER1L4A9Z1Z3 1794 aa32.05■■■□□ 2.72
SNRNP70-209ENST00000601065 CFAP65Q6ZU64 1925 aaKnown RBP32.05■■■□□ 2.72
SNRNP70-209ENST00000601065 CCDC144AA2RUR9 1427 aa32.03■■■□□ 2.72
SNRNP70-209ENST00000601065 MROH2AA6NES4 1674 aa32.03■■■□□ 2.72
SNRNP70-209ENST00000601065 ZMYM3Q14202 1370 aa32.02■■■□□ 2.72
SNRNP70-209ENST00000601065 NOS1P29475 1434 aa32.01■■■□□ 2.71
SNRNP70-209ENST00000601065 PREX1Q8TCU6 1659 aa32■■■□□ 2.71
SNRNP70-209ENST00000601065 ADAMTSL3P82987 1691 aa31.99■■■□□ 2.71
SNRNP70-209ENST00000601065 MADDQ8WXG6 1647 aa31.97■■■□□ 2.71
SNRNP70-209ENST00000601065 CLTCL1P53675 1640 aa31.96■■■□□ 2.71
SNRNP70-209ENST00000601065 ERVK-7P63135 1459 aa31.95■■■□□ 2.71
SNRNP70-209ENST00000601065 SYNMO15061 1565 aa31.95■■■□□ 2.7
SNRNP70-209ENST00000601065 FBXO31Q5XUX0 539 aaPredicted RBP31.94■■■□□ 2.7
SNRNP70-209ENST00000601065 UGGT1Q9NYU2 1555 aa31.93■■■□□ 2.7
SNRNP70-209ENST00000601065 TIMELESSQ9UNS1 1208 aa31.93■■■□□ 2.7
SNRNP70-209ENST00000601065 SPATA31D1Q6ZQQ2 1576 aa31.92■■■□□ 2.7
SNRNP70-209ENST00000601065 TONSLQ96HA7 1378 aa31.92■■■□□ 2.7
SNRNP70-209ENST00000601065 C3P01024 1663 aa31.9■■■□□ 2.7
SNRNP70-209ENST00000601065 RIMS1Q86UR5 1692 aaKnown RBP31.89■■■□□ 2.7
SNRNP70-209ENST00000601065 PIK3C2BO00750 1634 aa31.88■■■□□ 2.69
SNRNP70-209ENST00000601065 CEBPAP49715 358 aaPredicted RBP31.84■■■□□ 2.69
SNRNP70-209ENST00000601065 SLC52A1Q9NWF4 448 aa31.83■■■□□ 2.69
SNRNP70-209ENST00000601065 SPATA31E1Q6ZUB1 1445 aa31.83■■■□□ 2.69
SNRNP70-209ENST00000601065 KIF1BO60333 1816 aa31.82■■■□□ 2.68
SNRNP70-209ENST00000601065 L3MBTL2Q969R5 705 aa31.81■■■□□ 2.68
SNRNP70-209ENST00000601065 NEURL4Q96JN8 1562 aa31.8■■■□□ 2.68
SNRNP70-209ENST00000601065 IDI1Q13907 227 aa31.79■■■□□ 2.68
SNRNP70-209ENST00000601065 TNRQ92752 1358 aa31.77■■■□□ 2.68
SNRNP70-209ENST00000601065 ADGRB3O60242 1522 aa31.76■■■□□ 2.67
SNRNP70-209ENST00000601065 RGL3Q3MIN7 710 aa31.76■■■□□ 2.67
SNRNP70-209ENST00000601065 PLPPR3Q6T4P5 718 aa31.73■■■□□ 2.67
SNRNP70-209ENST00000601065 PPP1R15AO75807 674 aaPredicted RBP31.73■■■□□ 2.67
SNRNP70-209ENST00000601065 PTPRMP28827 1452 aa31.7■■■□□ 2.67
SNRNP70-209ENST00000601065 CHGAP10645 457 aaKnown RBP31.7■■■□□ 2.67
SNRNP70-209ENST00000601065 TMEM131LA2VDJ0 1609 aa31.69■■■□□ 2.66
SNRNP70-209ENST00000601065 DCAF11Q8TEB1 546 aa31.67■■■□□ 2.66
SNRNP70-209ENST00000601065 NLRP1Q9C000 1473 aa31.66■■■□□ 2.66
SNRNP70-209ENST00000601065 MYO5BQ9ULV0 1848 aa31.65■■■□□ 2.66
SNRNP70-209ENST00000601065 KDM4FA0A1W2PPD8 638 aa31.62■■■□□ 2.65
SNRNP70-209ENST00000601065 ZNF326Q5BKZ1 582 aaKnown RBP31.62■■■□□ 2.65
SNRNP70-209ENST00000601065 MYO3AQ8NEV4 1616 aa31.61■■■□□ 2.65
SNRNP70-209ENST00000601065 IFT172Q9UG01 1749 aa31.61■■■□□ 2.65
SNRNP70-209ENST00000601065 STAG3Q9UJ98 1225 aa31.61■■■□□ 2.65
SNRNP70-209ENST00000601065 KDM2AQ9Y2K7 1162 aa31.61■■■□□ 2.65
SNRNP70-209ENST00000601065 KDM5AP29375 1690 aaKnown RBP31.6■■■□□ 2.65
SNRNP70-209ENST00000601065 A2ML1A8K2U0 1454 aa31.6■■■□□ 2.65
SNRNP70-209ENST00000601065 UHRF1BP1Q6BDS2 1440 aa31.58■■■□□ 2.65
SNRNP70-209ENST00000601065 RPGRIP1LQ68CZ1 1315 aa31.57■■■□□ 2.65
SNRNP70-209ENST00000601065 UBR1Q8IWV7 1749 aa31.57■■■□□ 2.65
SNRNP70-209ENST00000601065 SETD1BQ9UPS6 1966 aaKnown RBP31.57■■■□□ 2.64
SNRNP70-209ENST00000601065 PPLO60437 1756 aa31.57■■■□□ 2.64
SNRNP70-209ENST00000601065 STAC3Q96MF2 364 aa31.56■■■□□ 2.64
SNRNP70-209ENST00000601065 NBPF8Q3BBV2 869 aa31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms