RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 IQGAP3Q86VI3 1631 aa28.74■■■□□ 2.19
PNKP-214ENST00000600573 EIF2AK4Q9P2K8 1649 aaKnown RBP28.74■■■□□ 2.19
PNKP-214ENST00000600573 KIDINS220Q9ULH0 1771 aa28.73■■■□□ 2.19
PNKP-214ENST00000600573 HECW2Q9P2P5 1572 aa28.72■■■□□ 2.19
PNKP-214ENST00000600573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.71■■■□□ 2.191e-7■■■■□ 24.4
PNKP-214ENST00000600573 A2MP01023 1474 aa28.7■■■□□ 2.18
PNKP-214ENST00000600573 KANK1Q14678 1352 aa28.69■■■□□ 2.18
PNKP-214ENST00000600573 DEPDC5O75140 1603 aa28.66■■■□□ 2.18
PNKP-214ENST00000600573 PPRC1Q5VV67 1664 aaKnown RBP28.66■■■□□ 2.18
PNKP-214ENST00000600573 RAPGEF3O95398 923 aa28.65■■■□□ 2.18
PNKP-214ENST00000600573 KIF3BO15066 747 aa28.65■■■□□ 2.18
PNKP-214ENST00000600573 RICTORQ6R327 1708 aa28.62■■■□□ 2.17
PNKP-214ENST00000600573 L3MBTL2Q969R5 705 aa28.61■■■□□ 2.17
PNKP-214ENST00000600573 ATP10AO60312 1499 aa28.61■■■□□ 2.17
PNKP-214ENST00000600573 VWDEQ8N2E2 1590 aa28.59■■■□□ 2.17
PNKP-214ENST00000600573 TSPOAP1O95153 1857 aa28.59■■■□□ 2.17
PNKP-214ENST00000600573 ZMYM4Q5VZL5 1548 aa28.58■■■□□ 2.17
PNKP-214ENST00000600573 PRDM15P57071 1507 aaPredicted RBP28.57■■■□□ 2.16
PNKP-214ENST00000600573 BCORL1Q5H9F3 1711 aa28.56■■■□□ 2.16
PNKP-214ENST00000600573 CCDC144AA2RUR9 1427 aa28.54■■■□□ 2.16
PNKP-214ENST00000600573 ABCA6Q8N139 1617 aa28.53■■■□□ 2.16
PNKP-214ENST00000600573 RNF17Q9BXT8 1623 aaKnown RBP28.53■■■□□ 2.16
PNKP-214ENST00000600573 FRMPD1Q5SYB0 1578 aa28.51■■■□□ 2.15
PNKP-214ENST00000600573 LMTK2Q8IWU2 1503 aa28.51■■■□□ 2.15
PNKP-214ENST00000600573 TET3O43151 1660 aa28.51■■■□□ 2.15
PNKP-214ENST00000600573 DIP2CQ9Y2E4 1556 aa28.51■■■□□ 2.15
PNKP-214ENST00000600573 TRHP20396 242 aaPredicted RBP28.51■■■□□ 2.15
PNKP-214ENST00000600573 PLA2R1Q13018 1463 aa28.49■■■□□ 2.15
PNKP-214ENST00000600573 MROH1Q8NDA8 1641 aa28.48■■■□□ 2.15
PNKP-214ENST00000600573 PTPRTO14522 1441 aa28.47■■■□□ 2.15
PNKP-214ENST00000600573 YEATS2Q9ULM3 1422 aa28.43■■■□□ 2.14
PNKP-214ENST00000600573 REREQ9P2R6 1566 aa28.42■■■□□ 2.14
PNKP-214ENST00000600573 E9PCH4 1651 aa28.41■■■□□ 2.14
PNKP-214ENST00000600573 UHRF1BP1Q6BDS2 1440 aa28.4■■■□□ 2.14
PNKP-214ENST00000600573 GGT6Q6P531 493 aa28.4■■■□□ 2.14
PNKP-214ENST00000600573 TRPM2O94759 1503 aa28.39■■■□□ 2.14
PNKP-214ENST00000600573 PPP6R1Q9UPN7 881 aa28.39■■■□□ 2.13
PNKP-214ENST00000600573 STAC3Q96MF2 364 aa28.38■■■□□ 2.13
PNKP-214ENST00000600573 EFCAB6Q5THR3 1501 aa28.38■■■□□ 2.13
PNKP-214ENST00000600573 WASHC2CQ9Y4E1 1318 aa28.37■■■□□ 2.13
PNKP-214ENST00000600573 COL17A1Q9UMD9 1497 aaPredicted RBP28.36■■■□□ 2.13
PNKP-214ENST00000600573 AGLP35573 1532 aa28.35■■■□□ 2.13
PNKP-214ENST00000600573 NBPF8Q3BBV2 869 aa28.34■■■□□ 2.13
PNKP-214ENST00000600573 SPHKAPQ2M3C7 1700 aa28.32■■■□□ 2.12
PNKP-214ENST00000600573 EIF4G2P78344 907 aaKnown RBP eCLIP28.32■■■□□ 2.12
PNKP-214ENST00000600573 DCAF11Q8TEB1 546 aa28.31■■■□□ 2.12
PNKP-214ENST00000600573 ABCC3O15438 1527 aa28.31■■■□□ 2.12
PNKP-214ENST00000600573 NEURL4Q96JN8 1562 aa28.3■■■□□ 2.12
PNKP-214ENST00000600573 ARHGAP31Q2M1Z3 1444 aa28.29■■■□□ 2.12
PNKP-214ENST00000600573 ZC3H13Q5T200 1668 aaKnown RBP28.28■■■□□ 2.12
PNKP-214ENST00000600573 SPATA31E1Q6ZUB1 1445 aa28.27■■■□□ 2.12
PNKP-214ENST00000600573 CNTLNQ9NXG0 1405 aa28.25■■■□□ 2.11
PNKP-214ENST00000600573 CEP152O94986 1710 aa28.24■■■□□ 2.11
PNKP-214ENST00000600573 NPATQ14207 1427 aa28.24■■■□□ 2.11
PNKP-214ENST00000600573 ARHGEF40Q8TER5 1519 aa28.24■■■□□ 2.11
PNKP-214ENST00000600573 MIER1Q8N108 512 aa28.24■■■□□ 2.11
PNKP-214ENST00000600573 RGL3Q3MIN7 710 aa28.23■■■□□ 2.11
PNKP-214ENST00000600573 RALGAPBQ86X10 1494 aa28.22■■■□□ 2.11
PNKP-214ENST00000600573 KDM2AQ9Y2K7 1162 aa28.21■■■□□ 2.11
PNKP-214ENST00000600573 HSPA5P11021 654 aaKnown RBP28.2■■■□□ 2.1
PNKP-214ENST00000600573 CLTCL1P53675 1640 aa28.19■■■□□ 2.1
PNKP-214ENST00000600573 PRAG1Q86YV5 1406 aa28.19■■■□□ 2.1
PNKP-214ENST00000600573 ZNF326Q5BKZ1 582 aaKnown RBP28.18■■■□□ 2.1
PNKP-214ENST00000600573 CAMSAP1Q5T5Y3 1602 aa28.18■■■□□ 2.1
PNKP-214ENST00000600573 NOS1P29475 1434 aa28.17■■■□□ 2.1
PNKP-214ENST00000600573 POLR1AO95602 1720 aaPredicted RBP28.12■■■□□ 2.09
PNKP-214ENST00000600573 SLC52A1Q9NWF4 448 aa28.11■■■□□ 2.09
PNKP-214ENST00000600573 CARD11Q9BXL7 1154 aa28.1■■■□□ 2.09
PNKP-214ENST00000600573 HIRIP3Q9BW71 556 aaPredicted RBP28.1■■■□□ 2.09
PNKP-214ENST00000600573 RPGRIP1LQ68CZ1 1315 aa28.09■■■□□ 2.09
PNKP-214ENST00000600573 KIF1BO60333 1816 aa28.08■■■□□ 2.09
PNKP-214ENST00000600573 ROCK2O75116 1388 aaKnown RBP28.08■■■□□ 2.09
PNKP-214ENST00000600573 GPRASP1Q5JY77 1395 aa28.08■■■□□ 2.09
PNKP-214ENST00000600573 USP47Q96K76 1375 aa28.07■■■□□ 2.08
PNKP-214ENST00000600573 TRPM1Q7Z4N2 1603 aa28.04■■■□□ 2.08
PNKP-214ENST00000600573 DDX10Q13206 875 aaKnown RBP28.03■■■□□ 2.08
PNKP-214ENST00000600573 ESF1Q9H501 851 aaKnown RBP28.03■■■□□ 2.08
PNKP-214ENST00000600573 MYOM2P54296 1465 aa28.03■■■□□ 2.08
PNKP-214ENST00000600573 ADGRB3O60242 1522 aa28.02■■■□□ 2.08
PNKP-214ENST00000600573 ARID4BQ4LE39 1312 aaPredicted RBP28.02■■■□□ 2.08
PNKP-214ENST00000600573 LAMC1P11047 1609 aa28.02■■■□□ 2.08
PNKP-214ENST00000600573 UGGT1Q9NYU2 1555 aa28.01■■■□□ 2.07
PNKP-214ENST00000600573 PIK3C2BO00750 1634 aa28■■■□□ 2.07
PNKP-214ENST00000600573 SYNMO15061 1565 aa27.97■■■□□ 2.07
PNKP-214ENST00000600573 SIGLEC1Q9BZZ2 1709 aa27.96■■■□□ 2.07
PNKP-214ENST00000600573 MADDQ8WXG6 1647 aa27.96■■■□□ 2.07
PNKP-214ENST00000600573 CHGAP10645 457 aaKnown RBP27.96■■■□□ 2.07
PNKP-214ENST00000600573 PREX1Q8TCU6 1659 aa27.95■■■□□ 2.07
PNKP-214ENST00000600573 WASHC2AQ641Q2 1341 aa27.95■■■□□ 2.06
PNKP-214ENST00000600573 ERVK-7P63135 1459 aa27.95■■■□□ 2.06
PNKP-214ENST00000600573 CENPBP07199 599 aaPredicted RBP27.95■■■□□ 2.06
PNKP-214ENST00000600573 MLECQ14165 292 aa27.95■■■□□ 2.06
PNKP-214ENST00000600573 IDI1Q13907 227 aa27.94■■■□□ 2.06
PNKP-214ENST00000600573 CCDC7Q96M83 1385 aa27.93■■■□□ 2.06
PNKP-214ENST00000600573 NBPF1Q3BBV0 1214 aa27.92■■■□□ 2.06
PNKP-214ENST00000600573 NRXN1Q9ULB1 1477 aa27.92■■■□□ 2.06
PNKP-214ENST00000600573 CLTCQ00610 1675 aaKnown RBP27.92■■■□□ 2.06
PNKP-214ENST00000600573 KIAA1210Q9ULL0 1709 aa27.91■■■□□ 2.06
PNKP-214ENST00000600573 ZMYM3Q14202 1370 aa27.9■■■□□ 2.06
PNKP-214ENST00000600573 CFAP65Q6ZU64 1925 aaKnown RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms