RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 GGT6Q6P531 493 aa22.19■■□□□ 1.14
LTBP4-228ENST00000600499 ANKRD50Q9ULJ7 1429 aa22.19■■□□□ 1.14
LTBP4-228ENST00000600499 MROH1Q8NDA8 1641 aa22.19■■□□□ 1.14
LTBP4-228ENST00000600499 MROH2AA6NES4 1674 aa22.18■■□□□ 1.14
LTBP4-228ENST00000600499 DEPDC5O75140 1603 aa22.18■■□□□ 1.14
LTBP4-228ENST00000600499 KDM5DQ9BY66 1539 aa22.17■■□□□ 1.14
LTBP4-228ENST00000600499 ITGAEP38570 1179 aa22.17■■□□□ 1.14
LTBP4-228ENST00000600499 PRDM15P57071 1507 aaPredicted RBP22.16■■□□□ 1.14
LTBP4-228ENST00000600499 HFM1A2PYH4 1435 aa22.13■■□□□ 1.13
LTBP4-228ENST00000600499 NAIPQ13075 1403 aa22.13■■□□□ 1.13
LTBP4-228ENST00000600499 VWDEQ8N2E2 1590 aa22.12■■□□□ 1.13
LTBP4-228ENST00000600499 AEBP2Q6ZN18 517 aaPredicted RBP22.12■■□□□ 1.13
LTBP4-228ENST00000600499 ESF1Q9H501 851 aaKnown RBP22.12■■□□□ 1.13
LTBP4-228ENST00000600499 ZMYM3Q14202 1370 aa22.12■■□□□ 1.13
LTBP4-228ENST00000600499 CLTCQ00610 1675 aaKnown RBP22.11■■□□□ 1.13
LTBP4-228ENST00000600499 ZC3H13Q5T200 1668 aaKnown RBP22.11■■□□□ 1.13
LTBP4-228ENST00000600499 C3P01024 1663 aa22.1■■□□□ 1.13
LTBP4-228ENST00000600499 ABCC3O15438 1527 aa22.1■■□□□ 1.13
LTBP4-228ENST00000600499 WASHC2CQ9Y4E1 1318 aa22.09■■□□□ 1.13
LTBP4-228ENST00000600499 GCC2Q8IWJ2 1684 aa22.09■■□□□ 1.13
LTBP4-228ENST00000600499 LMTK2Q8IWU2 1503 aa22.08■■□□□ 1.13
LTBP4-228ENST00000600499 UNC13BO14795 1591 aa22.08■■□□□ 1.12
LTBP4-228ENST00000600499 SETD1BQ9UPS6 1966 aaKnown RBP22.06■■□□□ 1.12
LTBP4-228ENST00000600499 NPATQ14207 1427 aa22.06■■□□□ 1.12
LTBP4-228ENST00000600499 CEBPAP49715 358 aaPredicted RBP22.05■■□□□ 1.12
LTBP4-228ENST00000600499 ARHGAP31Q2M1Z3 1444 aa22.05■■□□□ 1.12
LTBP4-228ENST00000600499 PZPP20742 1482 aa22.04■■□□□ 1.12
LTBP4-228ENST00000600499 KANK1Q14678 1352 aa22.04■■□□□ 1.12
LTBP4-228ENST00000600499 CEP152O94986 1710 aa22.01■■□□□ 1.11
LTBP4-228ENST00000600499 CAMSAP1Q5T5Y3 1602 aa22■■□□□ 1.11
LTBP4-228ENST00000600499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.99■■□□□ 1.11
LTBP4-228ENST00000600499 IQGAP3Q86VI3 1631 aa21.98■■□□□ 1.11
LTBP4-228ENST00000600499 ACIN1Q9UKV3 1341 aaKnown RBP21.95■■□□□ 1.1
LTBP4-228ENST00000600499 EFCAB6Q5THR3 1501 aa21.95■■□□□ 1.1
LTBP4-228ENST00000600499 SPATA31D1Q6ZQQ2 1576 aa21.95■■□□□ 1.1
LTBP4-228ENST00000600499 TET3O43151 1660 aa21.95■■□□□ 1.1
LTBP4-228ENST00000600499 NUP155O75694 1391 aa21.94■■□□□ 1.1
LTBP4-228ENST00000600499 SETD5Q9C0A6 1442 aa21.94■■□□□ 1.1
LTBP4-228ENST00000600499 PREX1Q8TCU6 1659 aa21.94■■□□□ 1.1
LTBP4-228ENST00000600499 RPRD2Q5VT52 1461 aaKnown RBP21.93■■□□□ 1.1
LTBP4-228ENST00000600499 LMTK3Q96Q04 1460 aa21.93■■□□□ 1.1
LTBP4-228ENST00000600499 ERVK-7P63135 1459 aa21.92■■□□□ 1.1
LTBP4-228ENST00000600499 FBXO31Q5XUX0 539 aaPredicted RBP21.92■■□□□ 1.1
LTBP4-228ENST00000600499 PLPPR3Q6T4P5 718 aa21.91■■□□□ 1.1
LTBP4-228ENST00000600499 HRCP23327 699 aa21.9■■□□□ 1.1
LTBP4-228ENST00000600499 UHRF1BP1Q6BDS2 1440 aa21.89■■□□□ 1.1
LTBP4-228ENST00000600499 TNRQ92752 1358 aa21.89■■□□□ 1.1
LTBP4-228ENST00000600499 NOS1P29475 1434 aa21.89■■□□□ 1.09
LTBP4-228ENST00000600499 ZNF142P52746 1687 aaPredicted RBP21.86■■□□□ 1.09
LTBP4-228ENST00000600499 NLRP1Q9C000 1473 aa21.86■■□□□ 1.09
LTBP4-228ENST00000600499 MYO3AQ8NEV4 1616 aa21.86■■□□□ 1.09
LTBP4-228ENST00000600499 E9PCH4 1651 aa21.85■■□□□ 1.09
LTBP4-228ENST00000600499 RAB3GAP2Q9H2M9 1393 aa21.84■■□□□ 1.09
LTBP4-228ENST00000600499 A2ML1A8K2U0 1454 aa21.83■■□□□ 1.09
LTBP4-228ENST00000600499 CFAP65Q6ZU64 1925 aaKnown RBP21.83■■□□□ 1.09
LTBP4-228ENST00000600499 TRIM26Q12899 539 aaPredicted RBP21.82■■□□□ 1.08
LTBP4-228ENST00000600499 CEP170BQ9Y4F5 1589 aaPredicted RBP21.82■■□□□ 1.08
LTBP4-228ENST00000600499 SYNMO15061 1565 aa21.8■■□□□ 1.08
LTBP4-228ENST00000600499 PTPRTO14522 1441 aa21.8■■□□□ 1.08
LTBP4-228ENST00000600499 TRIM52Q96A61 297 aa21.79■■□□□ 1.08
LTBP4-228ENST00000600499 SLC52A1Q9NWF4 448 aa21.77■■□□□ 1.08
LTBP4-228ENST00000600499 KDM5AP29375 1690 aaKnown RBP21.75■■□□□ 1.07
LTBP4-228ENST00000600499 SLC4A1APQ9BWU0 796 aaKnown RBP21.75■■□□□ 1.07
LTBP4-228ENST00000600499 PIK3C2BO00750 1634 aa21.75■■□□□ 1.07
LTBP4-228ENST00000600499 HSPA2P54652 639 aa21.74■■□□□ 1.07
LTBP4-228ENST00000600499 IDI1Q13907 227 aa21.74■■□□□ 1.07
LTBP4-228ENST00000600499 MPHOSPH9Q99550 1183 aa21.74■■□□□ 1.07
LTBP4-228ENST00000600499 PLA2R1Q13018 1463 aa21.74■■□□□ 1.07
LTBP4-228ENST00000600499 UGGT1Q9NYU2 1555 aa21.74■■□□□ 1.07
LTBP4-228ENST00000600499 PKD2Q13563 968 aa21.73■■□□□ 1.07
LTBP4-228ENST00000600499 SPHKAPQ2M3C7 1700 aa21.72■■□□□ 1.07
LTBP4-228ENST00000600499 THEMISQ8N1K5 641 aaPredicted RBP21.71■■□□□ 1.07
LTBP4-228ENST00000600499 UBR1Q8IWV7 1749 aa21.71■■□□□ 1.07
LTBP4-228ENST00000600499 TRPM2O94759 1503 aa21.7■■□□□ 1.06
LTBP4-228ENST00000600499 STRCQ7RTU9 1775 aa21.68■■□□□ 1.06
LTBP4-228ENST00000600499 ARHGAP23Q9P227 1491 aa21.66■■□□□ 1.06
LTBP4-228ENST00000600499 ADGRB3O60242 1522 aa21.65■■□□□ 1.06
LTBP4-228ENST00000600499 SLIT1O75093 1534 aa21.65■■□□□ 1.06
LTBP4-228ENST00000600499 TMEM131LA2VDJ0 1609 aa21.64■■□□□ 1.05
LTBP4-228ENST00000600499 CLTCL1P53675 1640 aa21.61■■□□□ 1.05
LTBP4-228ENST00000600499 TMEM2Q9UHN6 1383 aa21.61■■□□□ 1.05
LTBP4-228ENST00000600499 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
LTBP4-228ENST00000600499 MED14O60244 1454 aa21.59■■□□□ 1.05
LTBP4-228ENST00000600499 FOXD1Q16676 465 aa21.59■■□□□ 1.05
LTBP4-228ENST00000600499 ANKLE2Q86XL3 938 aa21.58■■□□□ 1.05
LTBP4-228ENST00000600499 NEURL4Q96JN8 1562 aa21.57■■□□□ 1.04
LTBP4-228ENST00000600499 STAG3Q9UJ98 1225 aa21.57■■□□□ 1.04
LTBP4-228ENST00000600499 ANKRD30BQ9BXX2 1392 aa21.57■■□□□ 1.04
LTBP4-228ENST00000600499 POLR1AO95602 1720 aaPredicted RBP21.57■■□□□ 1.04
LTBP4-228ENST00000600499 NCKAP5LQ9HCH0 1330 aa21.56■■□□□ 1.04
LTBP4-228ENST00000600499 ZFYVE9O95405 1425 aa21.56■■□□□ 1.04
LTBP4-228ENST00000600499 MYO5BQ9ULV0 1848 aa21.56■■□□□ 1.04
LTBP4-228ENST00000600499 SCAF11Q99590 1463 aaKnown RBP21.54■■□□□ 1.04
LTBP4-228ENST00000600499 LTKP29376 864 aa21.54■■□□□ 1.04
LTBP4-228ENST00000600499 KIF1BO60333 1816 aa21.53■■□□□ 1.04
LTBP4-228ENST00000600499 CCDC144AA2RUR9 1427 aa21.53■■□□□ 1.04
LTBP4-228ENST00000600499 TXNDC2Q86VQ3 553 aa21.51■■□□□ 1.03
LTBP4-228ENST00000600499 EID1Q9Y6B2 187 aa21.51■■□□□ 1.03
LTBP4-228ENST00000600499 NPHP4O75161 1426 aaPredicted RBP21.5■■□□□ 1.03
LTBP4-228ENST00000600499 RIMS2Q9UQ26 1411 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms