RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 OSCARQ8IYS5 282 aa30.01■■■□□ 2.4
GRAMD1A-212ENST00000600231 CARD11Q9BXL7 1154 aa30■■■□□ 2.39
GRAMD1A-212ENST00000600231 MAGI2Q86UL8 1455 aa30■■■□□ 2.39
GRAMD1A-212ENST00000600231 BCORL1Q5H9F3 1711 aa29.99■■■□□ 2.39
GRAMD1A-212ENST00000600231 PRKRIP1Q9H875 184 aaPredicted RBP29.97■■■□□ 2.39
GRAMD1A-212ENST00000600231 FANCAO15360 1455 aa29.96■■■□□ 2.39
GRAMD1A-212ENST00000600231 RTEL1-TNFRSF6BF6WH68 1400 aa29.96■■■□□ 2.39
GRAMD1A-212ENST00000600231 RGL3Q3MIN7 710 aa29.96■■■□□ 2.39
GRAMD1A-212ENST00000600231 ASXL2Q76L83 1435 aa29.96■■■□□ 2.39
GRAMD1A-212ENST00000600231 SUPT16HQ9Y5B9 1047 aaKnown RBP29.96■■■□□ 2.39
GRAMD1A-212ENST00000600231 ABCA9Q8IUA7 1624 aa29.95■■■□□ 2.39
GRAMD1A-212ENST00000600231 ZFYVE16Q7Z3T8 1539 aa29.93■■■□□ 2.38
GRAMD1A-212ENST00000600231 CCDC184Q52MB2 194 aa29.91■■■□□ 2.38
GRAMD1A-212ENST00000600231 POLR3GLQ9BT43 218 aa29.9■■■□□ 2.38
GRAMD1A-212ENST00000600231 ATP10AO60312 1499 aa29.89■■■□□ 2.37
GRAMD1A-212ENST00000600231 ROCK2O75116 1388 aaKnown RBP29.88■■■□□ 2.37
GRAMD1A-212ENST00000600231 PRAG1Q86YV5 1406 aa29.88■■■□□ 2.37
GRAMD1A-212ENST00000600231 ST20-MTHFSA0A0A6YYL1 179 aa29.87■■■□□ 2.37
GRAMD1A-212ENST00000600231 ARID4BQ4LE39 1312 aaPredicted RBP29.87■■■□□ 2.37
GRAMD1A-212ENST00000600231 A2MP01023 1474 aa29.86■■■□□ 2.37
GRAMD1A-212ENST00000600231 SCAPERQ9BY12 1400 aa29.85■■■□□ 2.37
GRAMD1A-212ENST00000600231 ADGRL1O94910 1474 aa29.85■■■□□ 2.37
GRAMD1A-212ENST00000600231 NPM1P06748 294 aaKnown RBP eCLIP29.83■■■□□ 2.37
GRAMD1A-212ENST00000600231 HNRNPUQ00839 825 aaKnown RBP eCLIP29.83■■■□□ 2.37
GRAMD1A-212ENST00000600231 ATP7AQ04656 1500 aa29.83■■■□□ 2.37
GRAMD1A-212ENST00000600231 DHX29Q7Z478 1369 aaKnown RBP29.81■■■□□ 2.36
GRAMD1A-212ENST00000600231 TRPM1Q7Z4N2 1603 aa29.81■■■□□ 2.36
GRAMD1A-212ENST00000600231 INO80Q9ULG1 1556 aaPredicted RBP29.8■■■□□ 2.36
GRAMD1A-212ENST00000600231 MYT1LQ9UL68 1186 aa29.8■■■□□ 2.36
GRAMD1A-212ENST00000600231 NBPF1Q3BBV0 1214 aa29.8■■■□□ 2.36
GRAMD1A-212ENST00000600231 MRS2Q9HD23 443 aa29.78■■■□□ 2.36
GRAMD1A-212ENST00000600231 E9PCH4 1651 aa29.77■■■□□ 2.36
GRAMD1A-212ENST00000600231 DEPDC5O75140 1603 aa29.75■■■□□ 2.35
GRAMD1A-212ENST00000600231 KIF3BO15066 747 aa29.74■■■□□ 2.35
GRAMD1A-212ENST00000600231 GPRASP1Q5JY77 1395 aa29.72■■■□□ 2.35
GRAMD1A-212ENST00000600231 FAM9BQ8IZU0 186 aa29.72■■■□□ 2.35
GRAMD1A-212ENST00000600231 CNGB1Q14028 1251 aaPredicted RBP29.71■■■□□ 2.35
GRAMD1A-212ENST00000600231 PELP1Q8IZL8 1130 aaKnown RBP29.71■■■□□ 2.35
GRAMD1A-212ENST00000600231 KANK1Q14678 1352 aa29.68■■■□□ 2.34
GRAMD1A-212ENST00000600231 FKBP8Q14318 412 aa29.68■■■□□ 2.34
GRAMD1A-212ENST00000600231 PTPRTO14522 1441 aa29.67■■■□□ 2.34
GRAMD1A-212ENST00000600231 TRPM2O94759 1503 aa29.66■■■□□ 2.34
GRAMD1A-212ENST00000600231 CD109Q6YHK3 1445 aa29.66■■■□□ 2.34
GRAMD1A-212ENST00000600231 VWDEQ8N2E2 1590 aa29.65■■■□□ 2.34
GRAMD1A-212ENST00000600231 TET3O43151 1660 aa29.65■■■□□ 2.34
GRAMD1A-212ENST00000600231 KIDINS220Q9ULH0 1771 aa29.64■■■□□ 2.34
GRAMD1A-212ENST00000600231 EIF2AK4Q9P2K8 1649 aaKnown RBP29.64■■■□□ 2.34
GRAMD1A-212ENST00000600231 SPHKAPQ2M3C7 1700 aa29.63■■■□□ 2.33
GRAMD1A-212ENST00000600231 ZNF518AQ6AHZ1 1483 aa29.63■■■□□ 2.33
GRAMD1A-212ENST00000600231 PRDM15P57071 1507 aaPredicted RBP29.62■■■□□ 2.33
GRAMD1A-212ENST00000600231 LAMC1P11047 1609 aa29.62■■■□□ 2.33
GRAMD1A-212ENST00000600231 MROH1Q8NDA8 1641 aa29.6■■■□□ 2.33
GRAMD1A-212ENST00000600231 CLTCL1P53675 1640 aa29.59■■■□□ 2.33
GRAMD1A-212ENST00000600231 NEFLP07196 543 aa29.58■■■□□ 2.33
GRAMD1A-212ENST00000600231 TESK2Q96S53 571 aa29.58■■■□□ 2.33
GRAMD1A-212ENST00000600231 CEP152O94986 1710 aa29.57■■■□□ 2.32
GRAMD1A-212ENST00000600231 BCANQ96GW7 911 aa29.56■■■□□ 2.32
GRAMD1A-212ENST00000600231 POGZQ7Z3K3 1410 aa29.53■■■□□ 2.32
GRAMD1A-212ENST00000600231 CFAP74Q9C0B2 1584 aa29.52■■■□□ 2.32
GRAMD1A-212ENST00000600231 MADDQ8WXG6 1647 aa29.52■■■□□ 2.32
GRAMD1A-212ENST00000600231 RNF17Q9BXT8 1623 aaKnown RBP29.51■■■□□ 2.31
GRAMD1A-212ENST00000600231 DISP3Q9P2K9 1392 aa29.51■■■□□ 2.31
GRAMD1A-212ENST00000600231 COL17A1Q9UMD9 1497 aaPredicted RBP29.51■■■□□ 2.31
GRAMD1A-212ENST00000600231 ZBED9Q6R2W3 1325 aa29.49■■■□□ 2.31
GRAMD1A-212ENST00000600231 STAC3Q96MF2 364 aa29.49■■■□□ 2.31
GRAMD1A-212ENST00000600231 MLH3Q9UHC1 1453 aa29.47■■■□□ 2.31
GRAMD1A-212ENST00000600231 EFCAB6Q5THR3 1501 aa29.46■■■□□ 2.31
GRAMD1A-212ENST00000600231 UGGT1Q9NYU2 1555 aa29.45■■■□□ 2.3
GRAMD1A-212ENST00000600231 TMF1P82094 1093 aa29.44■■■□□ 2.3
GRAMD1A-212ENST00000600231 TMC1Q8TDI8 760 aa29.44■■■□□ 2.3
GRAMD1A-212ENST00000600231 RALBP1Q15311 655 aa29.43■■■□□ 2.3
GRAMD1A-212ENST00000600231 PER1O15534 1290 aaPredicted RBP29.43■■■□□ 2.3
GRAMD1A-212ENST00000600231 KTN1Q86UP2 1357 aaKnown RBP29.43■■■□□ 2.3
GRAMD1A-212ENST00000600231 PPRC1Q5VV67 1664 aaKnown RBP29.43■■■□□ 2.3
GRAMD1A-212ENST00000600231 PNISRQ8TF01 805 aaKnown RBP29.42■■■□□ 2.3
GRAMD1A-212ENST00000600231 HECW2Q9P2P5 1572 aa29.42■■■□□ 2.3
GRAMD1A-212ENST00000600231 FRMPD1Q5SYB0 1578 aa29.42■■■□□ 2.3
GRAMD1A-212ENST00000600231 RAPGEF3O95398 923 aa29.41■■■□□ 2.3
GRAMD1A-212ENST00000600231 LMTK2Q8IWU2 1503 aa29.41■■■□□ 2.3
GRAMD1A-212ENST00000600231 MYBBP1AQ9BQG0 1328 aaKnown RBP29.41■■■□□ 2.3
GRAMD1A-212ENST00000600231 GGT6Q6P531 493 aa29.4■■■□□ 2.3
GRAMD1A-212ENST00000600231 NEO1Q92859 1461 aa29.39■■■□□ 2.3
GRAMD1A-212ENST00000600231 NEURL4Q96JN8 1562 aa29.39■■■□□ 2.29
GRAMD1A-212ENST00000600231 IQGAP1P46940 1657 aa29.37■■■□□ 2.29
GRAMD1A-212ENST00000600231 CYB5RLQ6IPT4 315 aa29.37■■■□□ 2.29
GRAMD1A-212ENST00000600231 BRD4O60885 1362 aaPredicted RBP29.35■■■□□ 2.29
GRAMD1A-212ENST00000600231 PANK3Q9H999 370 aa29.35■■■□□ 2.29
GRAMD1A-212ENST00000600231 ABCA6Q8N139 1617 aa29.35■■■□□ 2.29
GRAMD1A-212ENST00000600231 SCAF11Q99590 1463 aaKnown RBP29.35■■■□□ 2.29
GRAMD1A-212ENST00000600231 KIF1BO60333 1816 aa29.34■■■□□ 2.29
GRAMD1A-212ENST00000600231 PARD3Q8TEW0 1356 aa29.34■■■□□ 2.29
GRAMD1A-212ENST00000600231 ADGRF5Q8IZF2 1346 aa29.32■■■□□ 2.28
GRAMD1A-212ENST00000600231 NPATQ14207 1427 aa29.32■■■□□ 2.28
GRAMD1A-212ENST00000600231 CFAP65Q6ZU64 1925 aaKnown RBP29.31■■■□□ 2.28
GRAMD1A-212ENST00000600231 CFAP70Q5T0N1 1121 aa29.3■■■□□ 2.28
GRAMD1A-212ENST00000600231 IRX6P78412 446 aaPredicted RBP29.29■■■□□ 2.28
GRAMD1A-212ENST00000600231 MAP3K4Q9Y6R4 1608 aa29.29■■■□□ 2.28
GRAMD1A-212ENST00000600231 WASHC2CQ9Y4E1 1318 aa29.29■■■□□ 2.28
GRAMD1A-212ENST00000600231 MYOM2P54296 1465 aa29.29■■■□□ 2.28
GRAMD1A-212ENST00000600231 KIAA1210Q9ULL0 1709 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms