RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 PPP6R1Q9UPN7 881 aa28.41■■■□□ 2.14
COPE-209ENST00000599964 ESF1Q9H501 851 aaKnown RBP28.4■■■□□ 2.14
COPE-209ENST00000599964 KANK1Q14678 1352 aa28.38■■■□□ 2.13
COPE-209ENST00000599964 DEPDC5O75140 1603 aa28.38■■■□□ 2.13
COPE-209ENST00000599964 FAM135AQ9P2D6 1515 aa28.36■■■□□ 2.13
COPE-209ENST00000599964 PRDM15P57071 1507 aaPredicted RBP28.35■■■□□ 2.13
COPE-209ENST00000599964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.35■■■□□ 2.131e-6■■□□□ 13.1
COPE-209ENST00000599964 UNC13BO14795 1591 aa28.35■■■□□ 2.13
COPE-209ENST00000599964 MROH1Q8NDA8 1641 aa28.32■■■□□ 2.12
COPE-209ENST00000599964 ADAMTSL3P82987 1691 aa28.32■■■□□ 2.12
COPE-209ENST00000599964 PCGF6Q9BYE7 350 aa28.32■■■□□ 2.12
COPE-209ENST00000599964 WASHC2CQ9Y4E1 1318 aa28.32■■■□□ 2.12
COPE-209ENST00000599964 RAB3GAP2Q9H2M9 1393 aa28.32■■■□□ 2.12
COPE-209ENST00000599964 FER1L4A9Z1Z3 1794 aa28.32■■■□□ 2.12
COPE-209ENST00000599964 CNTLNQ9NXG0 1405 aa28.31■■■□□ 2.12
COPE-209ENST00000599964 KDM5DQ9BY66 1539 aa28.31■■■□□ 2.12
COPE-209ENST00000599964 ZC3H13Q5T200 1668 aaKnown RBP28.3■■■□□ 2.12
COPE-209ENST00000599964 HRCP23327 699 aa28.29■■■□□ 2.12
COPE-209ENST00000599964 TRIM52Q96A61 297 aa28.28■■■□□ 2.12
COPE-209ENST00000599964 MADDQ8WXG6 1647 aa28.28■■■□□ 2.12
COPE-209ENST00000599964 NUP155O75694 1391 aa28.27■■■□□ 2.12
COPE-209ENST00000599964 VWDEQ8N2E2 1590 aa28.25■■■□□ 2.11
COPE-209ENST00000599964 CLTCQ00610 1675 aaKnown RBP28.25■■■□□ 2.11
COPE-209ENST00000599964 ABCC3O15438 1527 aa28.24■■■□□ 2.11
COPE-209ENST00000599964 IQGAP3Q86VI3 1631 aa28.23■■■□□ 2.11
COPE-209ENST00000599964 MROH2AA6NES4 1674 aa28.23■■■□□ 2.11
COPE-209ENST00000599964 RIMS1Q86UR5 1692 aaKnown RBP28.23■■■□□ 2.11
COPE-209ENST00000599964 CEP152O94986 1710 aa28.21■■■□□ 2.11
COPE-209ENST00000599964 LMTK2Q8IWU2 1503 aa28.21■■■□□ 2.11
COPE-209ENST00000599964 KDM4FA0A1W2PPD8 638 aa28.19■■■□□ 2.1
COPE-209ENST00000599964 CAMSAP1Q5T5Y3 1602 aa28.18■■■□□ 2.1
COPE-209ENST00000599964 TET3O43151 1660 aa28.16■■■□□ 2.1
COPE-209ENST00000599964 ZMYM3Q14202 1370 aa28.16■■■□□ 2.1
COPE-209ENST00000599964 SLC4A1APQ9BWU0 796 aaKnown RBP28.14■■■□□ 2.1
COPE-209ENST00000599964 PTPRMP28827 1452 aa28.13■■■□□ 2.09
COPE-209ENST00000599964 EFCAB6Q5THR3 1501 aa28.13■■■□□ 2.09
COPE-209ENST00000599964 ARHGAP31Q2M1Z3 1444 aa28.12■■■□□ 2.09
COPE-209ENST00000599964 C3P01024 1663 aa28.1■■■□□ 2.09
COPE-209ENST00000599964 PZPP20742 1482 aa28.1■■■□□ 2.09
COPE-209ENST00000599964 RPRD2Q5VT52 1461 aaKnown RBP28.08■■■□□ 2.09
COPE-209ENST00000599964 MPHOSPH9Q99550 1183 aa28.08■■■□□ 2.09
COPE-209ENST00000599964 PLPPR3Q6T4P5 718 aa28.06■■■□□ 2.08
COPE-209ENST00000599964 NPATQ14207 1427 aa28.06■■■□□ 2.08
COPE-209ENST00000599964 CEBPAP49715 358 aaPredicted RBP28.05■■■□□ 2.08
COPE-209ENST00000599964 PKD2Q13563 968 aa28.04■■■□□ 2.08
COPE-209ENST00000599964 E9PCH4 1651 aa28.03■■■□□ 2.08
COPE-209ENST00000599964 PREX1Q8TCU6 1659 aa28■■■□□ 2.07
COPE-209ENST00000599964 ERVK-7P63135 1459 aa27.99■■■□□ 2.07
COPE-209ENST00000599964 FBXO31Q5XUX0 539 aaPredicted RBP27.98■■■□□ 2.07
COPE-209ENST00000599964 SPATA31D1Q6ZQQ2 1576 aa27.97■■■□□ 2.07
COPE-209ENST00000599964 CFAP65Q6ZU64 1925 aaKnown RBP27.96■■■□□ 2.07
COPE-209ENST00000599964 TNRQ92752 1358 aa27.95■■■□□ 2.06
COPE-209ENST00000599964 NOS1P29475 1434 aa27.93■■■□□ 2.06
COPE-209ENST00000599964 SPHKAPQ2M3C7 1700 aa27.92■■■□□ 2.06
COPE-209ENST00000599964 SETD1BQ9UPS6 1966 aaKnown RBP27.91■■■□□ 2.06
COPE-209ENST00000599964 PTPRTO14522 1441 aa27.9■■■□□ 2.06
COPE-209ENST00000599964 FOXD1Q16676 465 aa27.89■■■□□ 2.06
COPE-209ENST00000599964 DHX57Q6P158 1386 aaKnown RBP27.87■■■□□ 2.05
COPE-209ENST00000599964 SLC52A1Q9NWF4 448 aa27.87■■■□□ 2.05
COPE-209ENST00000599964 NLRP1Q9C000 1473 aa27.87■■■□□ 2.05
COPE-209ENST00000599964 TRPM2O94759 1503 aa27.87■■■□□ 2.05
COPE-209ENST00000599964 SYNMO15061 1565 aa27.86■■■□□ 2.05
COPE-209ENST00000599964 AEBP2Q6ZN18 517 aaPredicted RBP27.86■■■□□ 2.05
COPE-209ENST00000599964 MYO3AQ8NEV4 1616 aa27.85■■■□□ 2.05
COPE-209ENST00000599964 UHRF1BP1Q6BDS2 1440 aa27.84■■■□□ 2.05
COPE-209ENST00000599964 CCDC144AA2RUR9 1427 aa27.81■■■□□ 2.04
COPE-209ENST00000599964 PLA2R1Q13018 1463 aa27.81■■■□□ 2.04
COPE-209ENST00000599964 PIK3C2BO00750 1634 aa27.79■■■□□ 2.04
COPE-209ENST00000599964 ANKRD30BQ9BXX2 1392 aa27.79■■■□□ 2.04
COPE-209ENST00000599964 A2ML1A8K2U0 1454 aa27.78■■■□□ 2.04
COPE-209ENST00000599964 IDI1Q13907 227 aa27.78■■■□□ 2.04
COPE-209ENST00000599964 STAG3Q9UJ98 1225 aa27.77■■■□□ 2.04
COPE-209ENST00000599964 ZNF142P52746 1687 aaPredicted RBP27.77■■■□□ 2.04
COPE-209ENST00000599964 CEP170BQ9Y4F5 1589 aaPredicted RBP27.77■■■□□ 2.04
COPE-209ENST00000599964 CLTCL1P53675 1640 aa27.76■■■□□ 2.03
COPE-209ENST00000599964 UGGT1Q9NYU2 1555 aa27.76■■■□□ 2.03
COPE-209ENST00000599964 KDM5AP29375 1690 aaKnown RBP27.73■■■□□ 2.03
COPE-209ENST00000599964 KIF1BO60333 1816 aa27.71■■■□□ 2.03
COPE-209ENST00000599964 CHGAP10645 457 aaKnown RBP27.71■■■□□ 2.03
COPE-209ENST00000599964 THEMISQ8N1K5 641 aaPredicted RBP27.71■■■□□ 2.03
COPE-209ENST00000599964 ADGRB3O60242 1522 aa27.71■■■□□ 2.03
COPE-209ENST00000599964 CCER1Q8TC90 406 aaPredicted RBP27.7■■■□□ 2.02
COPE-209ENST00000599964 UBR1Q8IWV7 1749 aa27.69■■■□□ 2.02
COPE-209ENST00000599964 LMTK3Q96Q04 1460 aa27.68■■■□□ 2.02
COPE-209ENST00000599964 CLSPNQ9HAW4 1339 aa27.67■■■□□ 2.02
COPE-209ENST00000599964 TMEM131LA2VDJ0 1609 aa27.67■■■□□ 2.02
COPE-209ENST00000599964 NEURL4Q96JN8 1562 aa27.61■■■□□ 2.01
COPE-209ENST00000599964 ZNF326Q5BKZ1 582 aaKnown RBP27.61■■■□□ 2.01
COPE-209ENST00000599964 HDGFP51858 240 aaKnown RBP27.6■■■□□ 2.01
COPE-209ENST00000599964 MYO5BQ9ULV0 1848 aa27.59■■■□□ 2.01
COPE-209ENST00000599964 SPATA31E1Q6ZUB1 1445 aa27.58■■■□□ 2
COPE-209ENST00000599964 NEUROD1Q13562 356 aa27.57■■■□□ 2
COPE-209ENST00000599964 TMEM2Q9UHN6 1383 aa27.57■■■□□ 2
COPE-209ENST00000599964 SIN3AQ96ST3 1273 aa27.56■■■□□ 2
COPE-209ENST00000599964 EID1Q9Y6B2 187 aa27.56■■■□□ 2
COPE-209ENST00000599964 RPGRIP1LQ68CZ1 1315 aa27.56■■■□□ 2
COPE-209ENST00000599964 SLIT1O75093 1534 aa27.56■■■□□ 2
COPE-209ENST00000599964 HSPA2P54652 639 aa27.55■■■□□ 2
COPE-209ENST00000599964 RGL3Q3MIN7 710 aa27.55■■■□□ 2
COPE-209ENST00000599964 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms