RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 LMTK3Q96Q04 1460 aa32.54■■■□□ 2.8
LTBP4-224ENST00000599016 ACIN1Q9UKV3 1341 aaKnown RBP32.54■■■□□ 2.8
LTBP4-224ENST00000599016 HRCP23327 699 aa32.54■■■□□ 2.8
LTBP4-224ENST00000599016 HSPA2P54652 639 aa32.51■■■□□ 2.79
LTBP4-224ENST00000599016 MADDQ8WXG6 1647 aa32.5■■■□□ 2.79
LTBP4-224ENST00000599016 BCORL1Q5H9F3 1711 aa32.49■■■□□ 2.79
LTBP4-224ENST00000599016 KIF3BO15066 747 aa32.47■■■□□ 2.79
LTBP4-224ENST00000599016 AGLP35573 1532 aa32.46■■■□□ 2.79
LTBP4-224ENST00000599016 PLPPR3Q6T4P5 718 aa32.45■■■□□ 2.79
LTBP4-224ENST00000599016 UNC13BO14795 1591 aa32.43■■■□□ 2.78
LTBP4-224ENST00000599016 TRIM52Q96A61 297 aa32.42■■■□□ 2.78
LTBP4-224ENST00000599016 RNF17Q9BXT8 1623 aaKnown RBP32.41■■■□□ 2.78
LTBP4-224ENST00000599016 DEPDC5O75140 1603 aa32.4■■■□□ 2.78
LTBP4-224ENST00000599016 SIGLEC1Q9BZZ2 1709 aa32.4■■■□□ 2.78
LTBP4-224ENST00000599016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.36■■■□□ 2.77
LTBP4-224ENST00000599016 KANK1Q14678 1352 aa32.35■■■□□ 2.77
LTBP4-224ENST00000599016 NUP155O75694 1391 aa32.34■■■□□ 2.77
LTBP4-224ENST00000599016 GGT6Q6P531 493 aa32.34■■■□□ 2.77
LTBP4-224ENST00000599016 PRDM15P57071 1507 aaPredicted RBP32.34■■■□□ 2.77
LTBP4-224ENST00000599016 KDM5DQ9BY66 1539 aa32.32■■■□□ 2.76
LTBP4-224ENST00000599016 RIMS1Q86UR5 1692 aaKnown RBP32.32■■■□□ 2.76
LTBP4-224ENST00000599016 MROH1Q8NDA8 1641 aa32.32■■■□□ 2.76
LTBP4-224ENST00000599016 IQGAP3Q86VI3 1631 aa32.3■■■□□ 2.76
LTBP4-224ENST00000599016 CERKQ8TCT0 537 aa32.28■■■□□ 2.76
LTBP4-224ENST00000599016 MLECQ14165 292 aa32.26■■■□□ 2.75
LTBP4-224ENST00000599016 VWDEQ8N2E2 1590 aa32.26■■■□□ 2.75
LTBP4-224ENST00000599016 PPP6R1Q9UPN7 881 aa32.25■■■□□ 2.75
LTBP4-224ENST00000599016 FAM135AQ9P2D6 1515 aa32.25■■■□□ 2.75
LTBP4-224ENST00000599016 ZC3H13Q5T200 1668 aaKnown RBP32.23■■■□□ 2.75
LTBP4-224ENST00000599016 CEP152O94986 1710 aa32.23■■■□□ 2.75
LTBP4-224ENST00000599016 PZPP20742 1482 aa32.23■■■□□ 2.75
LTBP4-224ENST00000599016 SLC4A1APQ9BWU0 796 aaKnown RBP32.22■■■□□ 2.75
LTBP4-224ENST00000599016 MPHOSPH9Q99550 1183 aa32.21■■■□□ 2.75
LTBP4-224ENST00000599016 WASHC2CQ9Y4E1 1318 aa32.21■■■□□ 2.75
LTBP4-224ENST00000599016 TET3O43151 1660 aa32.18■■■□□ 2.74
LTBP4-224ENST00000599016 LMTK2Q8IWU2 1503 aa32.18■■■□□ 2.74
LTBP4-224ENST00000599016 ILDR2Q71H61 639 aa32.18■■■□□ 2.74
LTBP4-224ENST00000599016 ESF1Q9H501 851 aaKnown RBP32.18■■■□□ 2.74
LTBP4-224ENST00000599016 DHX57Q6P158 1386 aaKnown RBP32.18■■■□□ 2.74
LTBP4-224ENST00000599016 ABCC3O15438 1527 aa32.17■■■□□ 2.74
LTBP4-224ENST00000599016 CLTCQ00610 1675 aaKnown RBP32.14■■■□□ 2.74
LTBP4-224ENST00000599016 CAMSAP1Q5T5Y3 1602 aa32.12■■■□□ 2.73
LTBP4-224ENST00000599016 FER1L4A9Z1Z3 1794 aa32.12■■■□□ 2.73
LTBP4-224ENST00000599016 PKD2Q13563 968 aa32.11■■■□□ 2.73
LTBP4-224ENST00000599016 CNTLNQ9NXG0 1405 aa32.09■■■□□ 2.73
LTBP4-224ENST00000599016 CCER1Q8TC90 406 aaPredicted RBP32.09■■■□□ 2.73
LTBP4-224ENST00000599016 EFCAB6Q5THR3 1501 aa32.09■■■□□ 2.73
LTBP4-224ENST00000599016 CEBPAP49715 358 aaPredicted RBP32.08■■■□□ 2.73
LTBP4-224ENST00000599016 E9PCH4 1651 aa32.07■■■□□ 2.72
LTBP4-224ENST00000599016 MROH2AA6NES4 1674 aa32.05■■■□□ 2.72
LTBP4-224ENST00000599016 ARHGAP31Q2M1Z3 1444 aa32.01■■■□□ 2.72
LTBP4-224ENST00000599016 DISP3Q9P2K9 1392 aa32.01■■■□□ 2.71
LTBP4-224ENST00000599016 RPRD2Q5VT52 1461 aaKnown RBP32.01■■■□□ 2.71
LTBP4-224ENST00000599016 CFAP65Q6ZU64 1925 aaKnown RBP32■■■□□ 2.71
LTBP4-224ENST00000599016 FOXD1Q16676 465 aa31.99■■■□□ 2.71
LTBP4-224ENST00000599016 NPATQ14207 1427 aa31.98■■■□□ 2.71
LTBP4-224ENST00000599016 CLSPNQ9HAW4 1339 aa31.97■■■□□ 2.71
LTBP4-224ENST00000599016 ZMYM3Q14202 1370 aa31.96■■■□□ 2.71
LTBP4-224ENST00000599016 SPHKAPQ2M3C7 1700 aa31.95■■■□□ 2.71
LTBP4-224ENST00000599016 SOCS7O14512 581 aa31.92■■■□□ 2.7
LTBP4-224ENST00000599016 PREX1Q8TCU6 1659 aa31.91■■■□□ 2.7
LTBP4-224ENST00000599016 ANKRD30BQ9BXX2 1392 aa31.91■■■□□ 2.7
LTBP4-224ENST00000599016 C3P01024 1663 aa31.9■■■□□ 2.7
LTBP4-224ENST00000599016 PTPRTO14522 1441 aa31.88■■■□□ 2.69
LTBP4-224ENST00000599016 TRPM2O94759 1503 aa31.86■■■□□ 2.69
LTBP4-224ENST00000599016 ERVK-7P63135 1459 aa31.84■■■□□ 2.69
LTBP4-224ENST00000599016 NOS1P29475 1434 aa31.84■■■□□ 2.69
LTBP4-224ENST00000599016 STRCQ7RTU9 1775 aa31.83■■■□□ 2.69
LTBP4-224ENST00000599016 PLA2R1Q13018 1463 aa31.83■■■□□ 2.69
LTBP4-224ENST00000599016 SPATA31D1Q6ZQQ2 1576 aa31.82■■■□□ 2.68
LTBP4-224ENST00000599016 FBXO31Q5XUX0 539 aaPredicted RBP31.82■■■□□ 2.68
LTBP4-224ENST00000599016 CCDC144AA2RUR9 1427 aa31.81■■■□□ 2.68
LTBP4-224ENST00000599016 SYNMO15061 1565 aa31.78■■■□□ 2.68
LTBP4-224ENST00000599016 DMRT2Q9Y5R5 561 aa31.78■■■□□ 2.68
LTBP4-224ENST00000599016 SIN3AQ96ST3 1273 aa31.76■■■□□ 2.67
LTBP4-224ENST00000599016 CLTCL1P53675 1640 aa31.75■■■□□ 2.67
LTBP4-224ENST00000599016 TNRQ92752 1358 aa31.74■■■□□ 2.67
LTBP4-224ENST00000599016 NEUROD1Q13562 356 aa31.74■■■□□ 2.67
LTBP4-224ENST00000599016 SLC52A1Q9NWF4 448 aa31.73■■■□□ 2.67
LTBP4-224ENST00000599016 UHRF1BP1Q6BDS2 1440 aa31.73■■■□□ 2.67
LTBP4-224ENST00000599016 KIF1BO60333 1816 aa31.72■■■□□ 2.67
LTBP4-224ENST00000599016 PIK3C2BO00750 1634 aa31.72■■■□□ 2.67
LTBP4-224ENST00000599016 UGGT1Q9NYU2 1555 aa31.7■■■□□ 2.67
LTBP4-224ENST00000599016 SETD1BQ9UPS6 1966 aaKnown RBP31.68■■■□□ 2.66
LTBP4-224ENST00000599016 IDI1Q13907 227 aa31.64■■■□□ 2.66
LTBP4-224ENST00000599016 NLRP1Q9C000 1473 aa31.63■■■□□ 2.65
LTBP4-224ENST00000599016 LTBP4Q8N2S1 1624 aa31.63■■■□□ 2.65
LTBP4-224ENST00000599016 TONSLQ96HA7 1378 aa31.6■■■□□ 2.65
LTBP4-224ENST00000599016 CHGAP10645 457 aaKnown RBP31.6■■■□□ 2.65
LTBP4-224ENST00000599016 MYO3AQ8NEV4 1616 aa31.6■■■□□ 2.65
LTBP4-224ENST00000599016 NEURL4Q96JN8 1562 aa31.59■■■□□ 2.65
LTBP4-224ENST00000599016 STAG3Q9UJ98 1225 aa31.58■■■□□ 2.65
LTBP4-224ENST00000599016 TIMELESSQ9UNS1 1208 aa31.58■■■□□ 2.65
LTBP4-224ENST00000599016 ADGRB3O60242 1522 aa31.56■■■□□ 2.64
LTBP4-224ENST00000599016 SPATA31E1Q6ZUB1 1445 aa31.56■■■□□ 2.64
LTBP4-224ENST00000599016 KDM5AP29375 1690 aaKnown RBP31.55■■■□□ 2.64
LTBP4-224ENST00000599016 MYO5BQ9ULV0 1848 aa31.55■■■□□ 2.64
LTBP4-224ENST00000599016 ZEB1P37275 1124 aaPredicted RBP31.55■■■□□ 2.64
LTBP4-224ENST00000599016 TMEM131LA2VDJ0 1609 aa31.55■■■□□ 2.64
LTBP4-224ENST00000599016 RGL3Q3MIN7 710 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms