RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 ST20-MTHFSA0A0A6YYL1 179 aa26.87■■□□□ 1.89
GRAMD1A-207ENST00000598118 PLA2R1Q13018 1463 aa26.84■■□□□ 1.89
GRAMD1A-207ENST00000598118 PLXNC1O60486 1568 aa26.83■■□□□ 1.89
GRAMD1A-207ENST00000598118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.83■■□□□ 1.893e-12■■■□□ 17.2
GRAMD1A-207ENST00000598118 CCDC144AA2RUR9 1427 aa26.82■■□□□ 1.88
GRAMD1A-207ENST00000598118 PLEKHH2Q8IVE3 1493 aa26.82■■□□□ 1.88
GRAMD1A-207ENST00000598118 ROCK2O75116 1388 aaKnown RBP26.82■■□□□ 1.88
GRAMD1A-207ENST00000598118 TRPM1Q7Z4N2 1603 aa26.8■■□□□ 1.88
GRAMD1A-207ENST00000598118 ZCCHC11Q5TAX3 1644 aaKnown RBP26.79■■□□□ 1.88
GRAMD1A-207ENST00000598118 PRAG1Q86YV5 1406 aa26.79■■□□□ 1.88
GRAMD1A-207ENST00000598118 IQGAP3Q86VI3 1631 aa26.78■■□□□ 1.88
GRAMD1A-207ENST00000598118 RGL3Q3MIN7 710 aa26.77■■□□□ 1.88
GRAMD1A-207ENST00000598118 PLCH2O75038 1416 aa26.76■■□□□ 1.87
GRAMD1A-207ENST00000598118 CLASP1Q7Z460 1538 aa26.76■■□□□ 1.87
GRAMD1A-207ENST00000598118 DUOX2Q9NRD8 1548 aa26.74■■□□□ 1.87
GRAMD1A-207ENST00000598118 A2MP01023 1474 aa26.74■■□□□ 1.87
GRAMD1A-207ENST00000598118 E9PCH4 1651 aa26.74■■□□□ 1.87
GRAMD1A-207ENST00000598118 NBPF1Q3BBV0 1214 aa26.73■■□□□ 1.87
GRAMD1A-207ENST00000598118 RBM19Q9Y4C8 960 aaKnown RBP26.72■■□□□ 1.87
GRAMD1A-207ENST00000598118 MAGI2Q86UL8 1455 aa26.7■■□□□ 1.87
GRAMD1A-207ENST00000598118 UHRF1BP1LA0JNW5 1464 aa26.7■■□□□ 1.86
GRAMD1A-207ENST00000598118 ERICH6BQ5W0A0 696 aa26.69■■□□□ 1.86
GRAMD1A-207ENST00000598118 PNISRQ8TF01 805 aaKnown RBP26.69■■□□□ 1.86
GRAMD1A-207ENST00000598118 EFCAB2Q5VUJ9 269 aa26.68■■□□□ 1.86
GRAMD1A-207ENST00000598118 ERBINQ96RT1 1412 aa26.68■■□□□ 1.86
GRAMD1A-207ENST00000598118 ABCC1P33527 1531 aa26.68■■□□□ 1.86
GRAMD1A-207ENST00000598118 TRAPPC8Q9Y2L5 1435 aa26.68■■□□□ 1.86
GRAMD1A-207ENST00000598118 GPRASP1Q5JY77 1395 aa26.66■■□□□ 1.86
GRAMD1A-207ENST00000598118 MYT1Q01538 1121 aa26.65■■□□□ 1.86
GRAMD1A-207ENST00000598118 PPP4R2Q9NY27 417 aa26.65■■□□□ 1.86
GRAMD1A-207ENST00000598118 ATP10AO60312 1499 aa26.64■■□□□ 1.86
GRAMD1A-207ENST00000598118 TMC1Q8TDI8 760 aa26.64■■□□□ 1.86
GRAMD1A-207ENST00000598118 SENP3-EIF4A1A0A087X0R7 540 aa26.64■■□□□ 1.85
GRAMD1A-207ENST00000598118 SMG6Q86US8 1419 aaKnown RBP26.63■■□□□ 1.85
GRAMD1A-207ENST00000598118 LAMC1P11047 1609 aa26.61■■□□□ 1.85
GRAMD1A-207ENST00000598118 PRDM15P57071 1507 aaPredicted RBP26.61■■□□□ 1.85
GRAMD1A-207ENST00000598118 MYBBP1AQ9BQG0 1328 aaKnown RBP26.59■■□□□ 1.85
GRAMD1A-207ENST00000598118 RALBP1Q15311 655 aa26.59■■□□□ 1.85
GRAMD1A-207ENST00000598118 BRD4O60885 1362 aaPredicted RBP26.57■■□□□ 1.84
GRAMD1A-207ENST00000598118 LRPPRCP42704 1394 aaKnown RBP26.57■■□□□ 1.84
GRAMD1A-207ENST00000598118 KTN1Q86UP2 1357 aaKnown RBP26.57■■□□□ 1.84
GRAMD1A-207ENST00000598118 TESK2Q96S53 571 aa26.57■■□□□ 1.84
GRAMD1A-207ENST00000598118 NUDCQ9Y266 331 aa26.57■■□□□ 1.84
GRAMD1A-207ENST00000598118 AFAP1Q8N556 730 aa26.56■■□□□ 1.84
GRAMD1A-207ENST00000598118 EIF2AK4Q9P2K8 1649 aaKnown RBP26.56■■□□□ 1.84
GRAMD1A-207ENST00000598118 COL17A1Q9UMD9 1497 aaPredicted RBP26.55■■□□□ 1.84
GRAMD1A-207ENST00000598118 DISP3Q9P2K9 1392 aa26.55■■□□□ 1.84
GRAMD1A-207ENST00000598118 PER1O15534 1290 aaPredicted RBP26.54■■□□□ 1.84
GRAMD1A-207ENST00000598118 B4GALNT3Q6L9W6 998 aa26.54■■□□□ 1.84
GRAMD1A-207ENST00000598118 SPAG9O60271 1321 aaKnown RBP26.53■■□□□ 1.84
GRAMD1A-207ENST00000598118 ZFYVE16Q7Z3T8 1539 aa26.52■■□□□ 1.84
GRAMD1A-207ENST00000598118 PARD3Q8TEW0 1356 aa26.51■■□□□ 1.84
GRAMD1A-207ENST00000598118 ARAP3Q8WWN8 1544 aa26.5■■□□□ 1.83
GRAMD1A-207ENST00000598118 RTEL1-TNFRSF6BF6WH68 1400 aa26.5■■□□□ 1.83
GRAMD1A-207ENST00000598118 RNF17Q9BXT8 1623 aaKnown RBP26.49■■□□□ 1.83
GRAMD1A-207ENST00000598118 RNF123Q5XPI4 1314 aa26.48■■□□□ 1.83
GRAMD1A-207ENST00000598118 NLRP13Q86W25 1043 aa26.45■■□□□ 1.82
GRAMD1A-207ENST00000598118 WDR7Q9Y4E6 1490 aa26.45■■□□□ 1.82
GRAMD1A-207ENST00000598118 ANP32EQ9BTT0 268 aa26.44■■□□□ 1.82
GRAMD1A-207ENST00000598118 DEPDC5O75140 1603 aa26.44■■□□□ 1.82
GRAMD1A-207ENST00000598118 SPHKAPQ2M3C7 1700 aa26.43■■□□□ 1.82
GRAMD1A-207ENST00000598118 MADDQ8WXG6 1647 aa26.43■■□□□ 1.82
GRAMD1A-207ENST00000598118 TRPM2O94759 1503 aa26.43■■□□□ 1.82
GRAMD1A-207ENST00000598118 ABCA9Q8IUA7 1624 aa26.42■■□□□ 1.82
GRAMD1A-207ENST00000598118 CEP152O94986 1710 aa26.42■■□□□ 1.82
GRAMD1A-207ENST00000598118 PANK3Q9H999 370 aa26.42■■□□□ 1.82
GRAMD1A-207ENST00000598118 TMF1P82094 1093 aa26.41■■□□□ 1.82
GRAMD1A-207ENST00000598118 FANCAO15360 1455 aa26.41■■□□□ 1.82
GRAMD1A-207ENST00000598118 CC2D1BQ5T0F9 858 aaKnown RBP26.4■■□□□ 1.82
GRAMD1A-207ENST00000598118 CLTCL1P53675 1640 aa26.4■■□□□ 1.82
GRAMD1A-207ENST00000598118 PTPRTO14522 1441 aa26.4■■□□□ 1.82
GRAMD1A-207ENST00000598118 INO80Q9ULG1 1556 aaPredicted RBP26.4■■□□□ 1.82
GRAMD1A-207ENST00000598118 ATP7AQ04656 1500 aa26.39■■□□□ 1.82
GRAMD1A-207ENST00000598118 TET3O43151 1660 aa26.37■■□□□ 1.81
GRAMD1A-207ENST00000598118 IQGAP1P46940 1657 aa26.37■■□□□ 1.81
GRAMD1A-207ENST00000598118 WASHC2CQ9Y4E1 1318 aa26.37■■□□□ 1.81
GRAMD1A-207ENST00000598118 VWDEQ8N2E2 1590 aa26.35■■□□□ 1.81
GRAMD1A-207ENST00000598118 SALL2Q9Y467 1007 aaPredicted RBP26.34■■□□□ 1.81
GRAMD1A-207ENST00000598118 SCAPERQ9BY12 1400 aa26.33■■□□□ 1.8
GRAMD1A-207ENST00000598118 MSH5O43196 834 aa26.32■■□□□ 1.8
GRAMD1A-207ENST00000598118 ADGRL1O94910 1474 aa26.32■■□□□ 1.8
GRAMD1A-207ENST00000598118 KIF3BO15066 747 aa26.32■■□□□ 1.8
GRAMD1A-207ENST00000598118 FANCIQ9NVI1 1328 aa26.29■■□□□ 1.8
GRAMD1A-207ENST00000598118 MROH1Q8NDA8 1641 aa26.29■■□□□ 1.8
GRAMD1A-207ENST00000598118 MYT1LQ9UL68 1186 aa26.28■■□□□ 1.8
GRAMD1A-207ENST00000598118 KANK1Q14678 1352 aa26.28■■□□□ 1.8
GRAMD1A-207ENST00000598118 ASXL2Q76L83 1435 aa26.28■■□□□ 1.8
GRAMD1A-207ENST00000598118 SCAF11Q99590 1463 aaKnown RBP26.26■■□□□ 1.79
GRAMD1A-207ENST00000598118 STAC3Q96MF2 364 aa26.25■■□□□ 1.79
GRAMD1A-207ENST00000598118 UGGT1Q9NYU2 1555 aa26.24■■□□□ 1.79
GRAMD1A-207ENST00000598118 CCDC136Q96JN2 1154 aa26.24■■□□□ 1.79
GRAMD1A-207ENST00000598118 KIDINS220Q9ULH0 1771 aa26.22■■□□□ 1.79
GRAMD1A-207ENST00000598118 BLMP54132 1417 aaPredicted RBP26.22■■□□□ 1.79
GRAMD1A-207ENST00000598118 CDCA7LQ96GN5 454 aa26.22■■□□□ 1.79
GRAMD1A-207ENST00000598118 RRP1P56182 461 aaKnown RBP26.2■■□□□ 1.78
GRAMD1A-207ENST00000598118 PDE3BQ13370 1112 aa26.2■■□□□ 1.78
GRAMD1A-207ENST00000598118 RCAN3Q9UKA8 241 aa26.19■■□□□ 1.78
GRAMD1A-207ENST00000598118 KIAA1210Q9ULL0 1709 aa26.19■■□□□ 1.78
GRAMD1A-207ENST00000598118 INSRP06213 1382 aa26.18■■□□□ 1.78
GRAMD1A-207ENST00000598118 ZMYM4Q5VZL5 1548 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms