RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 ADAMTSL3P82987 1691 aa33.83■■■■□ 3.01
SNRNP70-204ENST00000595231 SETD5Q9C0A6 1442 aa33.82■■■■□ 3
SNRNP70-204ENST00000595231 PPP6R1Q9UPN7 881 aa33.79■■■■□ 3
SNRNP70-204ENST00000595231 KDM4FA0A1W2PPD8 638 aa33.78■■■■□ 3
SNRNP70-204ENST00000595231 PRDM15P57071 1507 aaPredicted RBP33.77■■■■□ 3
SNRNP70-204ENST00000595231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.76■■■□□ 2.991e-10■■□□□ 11.8
SNRNP70-204ENST00000595231 UNC13BO14795 1591 aa33.75■■■□□ 2.99
SNRNP70-204ENST00000595231 MADDQ8WXG6 1647 aa33.74■■■□□ 2.99
SNRNP70-204ENST00000595231 FER1L4A9Z1Z3 1794 aa33.73■■■□□ 2.99
SNRNP70-204ENST00000595231 RAB3GAP2Q9H2M9 1393 aa33.72■■■□□ 2.99
SNRNP70-204ENST00000595231 VWDEQ8N2E2 1590 aa33.71■■■□□ 2.99
SNRNP70-204ENST00000595231 WASHC2CQ9Y4E1 1318 aa33.7■■■□□ 2.99
SNRNP70-204ENST00000595231 KDM5DQ9BY66 1539 aa33.7■■■□□ 2.99
SNRNP70-204ENST00000595231 FAM135AQ9P2D6 1515 aa33.69■■■□□ 2.98
SNRNP70-204ENST00000595231 PCGF6Q9BYE7 350 aa33.68■■■□□ 2.98
SNRNP70-204ENST00000595231 CLTCQ00610 1675 aaKnown RBP33.67■■■□□ 2.98
SNRNP70-204ENST00000595231 KANK1Q14678 1352 aa33.67■■■□□ 2.98
SNRNP70-204ENST00000595231 ESF1Q9H501 851 aaKnown RBP33.67■■■□□ 2.98
SNRNP70-204ENST00000595231 ABCC3O15438 1527 aa33.67■■■□□ 2.98
SNRNP70-204ENST00000595231 NUP155O75694 1391 aa33.66■■■□□ 2.98
SNRNP70-204ENST00000595231 RIMS1Q86UR5 1692 aaKnown RBP33.65■■■□□ 2.98
SNRNP70-204ENST00000595231 CNTLNQ9NXG0 1405 aa33.65■■■□□ 2.98
SNRNP70-204ENST00000595231 HRCP23327 699 aa33.64■■■□□ 2.98
SNRNP70-204ENST00000595231 CEP152O94986 1710 aa33.64■■■□□ 2.98
SNRNP70-204ENST00000595231 ZC3H13Q5T200 1668 aaKnown RBP33.64■■■□□ 2.97
SNRNP70-204ENST00000595231 LMTK2Q8IWU2 1503 aa33.62■■■□□ 2.97
SNRNP70-204ENST00000595231 IQGAP3Q86VI3 1631 aa33.61■■■□□ 2.97
SNRNP70-204ENST00000595231 TRIM52Q96A61 297 aa33.61■■■□□ 2.97
SNRNP70-204ENST00000595231 ZMYM3Q14202 1370 aa33.6■■■□□ 2.97
SNRNP70-204ENST00000595231 MROH2AA6NES4 1674 aa33.59■■■□□ 2.97
SNRNP70-204ENST00000595231 PTPRMP28827 1452 aa33.58■■■□□ 2.97
SNRNP70-204ENST00000595231 ACIN1Q9UKV3 1341 aaKnown RBP33.57■■■□□ 2.96
SNRNP70-204ENST00000595231 CAMSAP1Q5T5Y3 1602 aa33.55■■■□□ 2.96
SNRNP70-204ENST00000595231 CEBPAP49715 358 aaPredicted RBP33.55■■■□□ 2.96
SNRNP70-204ENST00000595231 PZPP20742 1482 aa33.54■■■□□ 2.96
SNRNP70-204ENST00000595231 C3P01024 1663 aa33.54■■■□□ 2.96
SNRNP70-204ENST00000595231 TET3O43151 1660 aa33.52■■■□□ 2.96
SNRNP70-204ENST00000595231 ARHGAP31Q2M1Z3 1444 aa33.51■■■□□ 2.95
SNRNP70-204ENST00000595231 EFCAB6Q5THR3 1501 aa33.5■■■□□ 2.95
SNRNP70-204ENST00000595231 NPATQ14207 1427 aa33.48■■■□□ 2.95
SNRNP70-204ENST00000595231 SLC4A1APQ9BWU0 796 aaKnown RBP33.46■■■□□ 2.95
SNRNP70-204ENST00000595231 PLPPR3Q6T4P5 718 aa33.45■■■□□ 2.95
SNRNP70-204ENST00000595231 MPHOSPH9Q99550 1183 aa33.45■■■□□ 2.95
SNRNP70-204ENST00000595231 FBXO31Q5XUX0 539 aaPredicted RBP33.45■■■□□ 2.94
SNRNP70-204ENST00000595231 E9PCH4 1651 aa33.43■■■□□ 2.94
SNRNP70-204ENST00000595231 CFAP65Q6ZU64 1925 aaKnown RBP33.42■■■□□ 2.94
SNRNP70-204ENST00000595231 RPRD2Q5VT52 1461 aaKnown RBP33.41■■■□□ 2.94
SNRNP70-204ENST00000595231 PKD2Q13563 968 aa33.4■■■□□ 2.94
SNRNP70-204ENST00000595231 PREX1Q8TCU6 1659 aa33.36■■■□□ 2.93
SNRNP70-204ENST00000595231 ERVK-7P63135 1459 aa33.35■■■□□ 2.93
SNRNP70-204ENST00000595231 SPATA31D1Q6ZQQ2 1576 aa33.35■■■□□ 2.93
SNRNP70-204ENST00000595231 NOS1P29475 1434 aa33.32■■■□□ 2.93
SNRNP70-204ENST00000595231 FOXD1Q16676 465 aa33.32■■■□□ 2.92
SNRNP70-204ENST00000595231 SETD1BQ9UPS6 1966 aaKnown RBP33.3■■■□□ 2.92
SNRNP70-204ENST00000595231 TNRQ92752 1358 aa33.28■■■□□ 2.92
SNRNP70-204ENST00000595231 PTPRTO14522 1441 aa33.28■■■□□ 2.92
SNRNP70-204ENST00000595231 SYNMO15061 1565 aa33.26■■■□□ 2.91
SNRNP70-204ENST00000595231 PLA2R1Q13018 1463 aa33.25■■■□□ 2.91
SNRNP70-204ENST00000595231 SPHKAPQ2M3C7 1700 aa33.23■■■□□ 2.91
SNRNP70-204ENST00000595231 DHX57Q6P158 1386 aaKnown RBP33.22■■■□□ 2.91
SNRNP70-204ENST00000595231 MYO3AQ8NEV4 1616 aa33.18■■■□□ 2.9
SNRNP70-204ENST00000595231 TRPM2O94759 1503 aa33.17■■■□□ 2.9
SNRNP70-204ENST00000595231 IDI1Q13907 227 aa33.17■■■□□ 2.9
SNRNP70-204ENST00000595231 SLC52A1Q9NWF4 448 aa33.17■■■□□ 2.9
SNRNP70-204ENST00000595231 UGGT1Q9NYU2 1555 aa33.16■■■□□ 2.9
SNRNP70-204ENST00000595231 NLRP1Q9C000 1473 aa33.16■■■□□ 2.9
SNRNP70-204ENST00000595231 PIK3C2BO00750 1634 aa33.15■■■□□ 2.9
SNRNP70-204ENST00000595231 ANKRD30BQ9BXX2 1392 aa33.15■■■□□ 2.9
SNRNP70-204ENST00000595231 AEBP2Q6ZN18 517 aaPredicted RBP33.14■■■□□ 2.9
SNRNP70-204ENST00000595231 UHRF1BP1Q6BDS2 1440 aa33.13■■■□□ 2.89
SNRNP70-204ENST00000595231 A2ML1A8K2U0 1454 aa33.1■■■□□ 2.89
SNRNP70-204ENST00000595231 CEP170BQ9Y4F5 1589 aaPredicted RBP33.09■■■□□ 2.89
SNRNP70-204ENST00000595231 CLTCL1P53675 1640 aa33.09■■■□□ 2.89
SNRNP70-204ENST00000595231 ZNF142P52746 1687 aaPredicted RBP33.08■■■□□ 2.89
SNRNP70-204ENST00000595231 LMTK3Q96Q04 1460 aa33.08■■■□□ 2.89
SNRNP70-204ENST00000595231 CCDC144AA2RUR9 1427 aa33.04■■■□□ 2.88
SNRNP70-204ENST00000595231 UBR1Q8IWV7 1749 aa33.02■■■□□ 2.88
SNRNP70-204ENST00000595231 TMEM131LA2VDJ0 1609 aa33■■■□□ 2.87
SNRNP70-204ENST00000595231 KDM5AP29375 1690 aaKnown RBP32.99■■■□□ 2.87
SNRNP70-204ENST00000595231 ADGRB3O60242 1522 aa32.99■■■□□ 2.87
SNRNP70-204ENST00000595231 STAG3Q9UJ98 1225 aa32.97■■■□□ 2.87
SNRNP70-204ENST00000595231 THEMISQ8N1K5 641 aaPredicted RBP32.96■■■□□ 2.87
SNRNP70-204ENST00000595231 KIF1BO60333 1816 aa32.96■■■□□ 2.87
SNRNP70-204ENST00000595231 MYO5BQ9ULV0 1848 aa32.96■■■□□ 2.87
SNRNP70-204ENST00000595231 CHGAP10645 457 aaKnown RBP32.95■■■□□ 2.87
SNRNP70-204ENST00000595231 HSPA2P54652 639 aa32.95■■■□□ 2.87
SNRNP70-204ENST00000595231 SPATA31E1Q6ZUB1 1445 aa32.9■■■□□ 2.86
SNRNP70-204ENST00000595231 SIN3AQ96ST3 1273 aa32.9■■■□□ 2.86
SNRNP70-204ENST00000595231 TMEM2Q9UHN6 1383 aa32.86■■■□□ 2.85
SNRNP70-204ENST00000595231 ARHGAP23Q9P227 1491 aa32.86■■■□□ 2.85
SNRNP70-204ENST00000595231 SLIT1O75093 1534 aa32.86■■■□□ 2.85
SNRNP70-204ENST00000595231 NEURL4Q96JN8 1562 aa32.86■■■□□ 2.85
SNRNP70-204ENST00000595231 CCER1Q8TC90 406 aaPredicted RBP32.85■■■□□ 2.85
SNRNP70-204ENST00000595231 RGL3Q3MIN7 710 aa32.82■■■□□ 2.84
SNRNP70-204ENST00000595231 CLSPNQ9HAW4 1339 aa32.82■■■□□ 2.84
SNRNP70-204ENST00000595231 ZNF326Q5BKZ1 582 aaKnown RBP32.82■■■□□ 2.84
SNRNP70-204ENST00000595231 ZFYVE9O95405 1425 aa32.81■■■□□ 2.84
SNRNP70-204ENST00000595231 LTKP29376 864 aa32.79■■■□□ 2.84
SNRNP70-204ENST00000595231 NEUROD1Q13562 356 aa32.79■■■□□ 2.84
SNRNP70-204ENST00000595231 RIMS2Q9UQ26 1411 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms