RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 RRP7BPQ9NSQ0 103 aa21.72■■□□□ 1.07
CAPN12-202ENST00000593700 AFAP1Q8N556 730 aa21.71■■□□□ 1.07
CAPN12-202ENST00000593700 DUOX2Q9NRD8 1548 aa21.7■■□□□ 1.07
CAPN12-202ENST00000593700 KIF15Q9NS87 1388 aa21.7■■□□□ 1.06
CAPN12-202ENST00000593700 KIDINS220Q9ULH0 1771 aa21.69■■□□□ 1.06
CAPN12-202ENST00000593700 SPAG9O60271 1321 aaKnown RBP21.69■■□□□ 1.06
CAPN12-202ENST00000593700 CCER1Q8TC90 406 aaPredicted RBP21.68■■□□□ 1.06
CAPN12-202ENST00000593700 MYT1LQ9UL68 1186 aa21.68■■□□□ 1.06
CAPN12-202ENST00000593700 ANKRD50Q9ULJ7 1429 aa21.67■■□□□ 1.06
CAPN12-202ENST00000593700 EIF2AK4Q9P2K8 1649 aaKnown RBP21.66■■□□□ 1.06
CAPN12-202ENST00000593700 ATP10AO60312 1499 aa21.66■■□□□ 1.06
CAPN12-202ENST00000593700 ERBINQ96RT1 1412 aa21.65■■□□□ 1.06
CAPN12-202ENST00000593700 REREQ9P2R6 1566 aa21.64■■□□□ 1.05
CAPN12-202ENST00000593700 YEATS2Q9ULM3 1422 aa21.63■■□□□ 1.05
CAPN12-202ENST00000593700 UNC13BO14795 1591 aa21.62■■□□□ 1.05
CAPN12-202ENST00000593700 DHX57Q6P158 1386 aaKnown RBP21.61■■□□□ 1.05
CAPN12-202ENST00000593700 DIP2CQ9Y2E4 1556 aa21.61■■□□□ 1.05
CAPN12-202ENST00000593700 ABCA6Q8N139 1617 aa21.6■■□□□ 1.05
CAPN12-202ENST00000593700 CLSPNQ9HAW4 1339 aa21.59■■□□□ 1.05
CAPN12-202ENST00000593700 ZEB1P37275 1124 aaPredicted RBP21.58■■□□□ 1.05
CAPN12-202ENST00000593700 KDM5DQ9BY66 1539 aa21.58■■□□□ 1.04
CAPN12-202ENST00000593700 ARID4BQ4LE39 1312 aaPredicted RBP21.56■■□□□ 1.04
CAPN12-202ENST00000593700 BCORL1Q5H9F3 1711 aa21.56■■□□□ 1.04
CAPN12-202ENST00000593700 AGLP35573 1532 aa21.55■■□□□ 1.04
CAPN12-202ENST00000593700 DEPDC5O75140 1603 aa21.55■■□□□ 1.04
CAPN12-202ENST00000593700 TRIM52Q96A61 297 aa21.53■■□□□ 1.04
CAPN12-202ENST00000593700 IQGAP3Q86VI3 1631 aa21.53■■□□□ 1.04
CAPN12-202ENST00000593700 A2MP01023 1474 aa21.52■■□□□ 1.03
CAPN12-202ENST00000593700 SLC4A2P04920 1241 aa21.51■■□□□ 1.03
CAPN12-202ENST00000593700 RNF17Q9BXT8 1623 aaKnown RBP21.51■■□□□ 1.03
CAPN12-202ENST00000593700 DHX29Q7Z478 1369 aaKnown RBP21.48■■□□□ 1.03
CAPN12-202ENST00000593700 PRDM15P57071 1507 aaPredicted RBP21.47■■□□□ 1.03
CAPN12-202ENST00000593700 ADAMTSL3P82987 1691 aa21.47■■□□□ 1.03
CAPN12-202ENST00000593700 FAM135AQ9P2D6 1515 aa21.45■■□□□ 1.02
CAPN12-202ENST00000593700 KDM4FA0A1W2PPD8 638 aa21.45■■□□□ 1.02
CAPN12-202ENST00000593700 PZPP20742 1482 aa21.45■■□□□ 1.02
CAPN12-202ENST00000593700 NUP155O75694 1391 aa21.43■■□□□ 1.02
CAPN12-202ENST00000593700 TET3O43151 1660 aa21.43■■□□□ 1.02
CAPN12-202ENST00000593700 ZC3H13Q5T200 1668 aaKnown RBP21.43■■□□□ 1.02
CAPN12-202ENST00000593700 KANK1Q14678 1352 aa21.42■■□□□ 1.02
CAPN12-202ENST00000593700 SIGLEC1Q9BZZ2 1709 aa21.41■■□□□ 1.02
CAPN12-202ENST00000593700 MROH1Q8NDA8 1641 aa21.4■■□□□ 1.02
CAPN12-202ENST00000593700 CEP152O94986 1710 aa21.4■■□□□ 1.02
CAPN12-202ENST00000593700 CNTLNQ9NXG0 1405 aa21.39■■□□□ 1.02
CAPN12-202ENST00000593700 MPHOSPH9Q99550 1183 aa21.39■■□□□ 1.01
CAPN12-202ENST00000593700 ESF1Q9H501 851 aaKnown RBP21.39■■□□□ 1.01
CAPN12-202ENST00000593700 VWDEQ8N2E2 1590 aa21.38■■□□□ 1.01
CAPN12-202ENST00000593700 FER1L4A9Z1Z3 1794 aa21.38■■□□□ 1.01
CAPN12-202ENST00000593700 MADDQ8WXG6 1647 aa21.37■■□□□ 1.01
CAPN12-202ENST00000593700 MLECQ14165 292 aa21.36■■□□□ 1.01
CAPN12-202ENST00000593700 KIF3BO15066 747 aa21.35■■□□□ 1.01
CAPN12-202ENST00000593700 E9PCH4 1651 aa21.33■■□□□ 1
CAPN12-202ENST00000593700 PTPRMP28827 1452 aa21.32■■□□□ 1
CAPN12-202ENST00000593700 SPHKAPQ2M3C7 1700 aa21.32■■□□□ 1
CAPN12-202ENST00000593700 RIMS1Q86UR5 1692 aaKnown RBP21.32■■□□□ 1
CAPN12-202ENST00000593700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.32■■□□□ 15e-7■■□□□ 11.7
CAPN12-202ENST00000593700 LMTK2Q8IWU2 1503 aa21.31■■□□□ 1
CAPN12-202ENST00000593700 CAMSAP1Q5T5Y3 1602 aa21.31■■□□□ 1
CAPN12-202ENST00000593700 EFCAB6Q5THR3 1501 aa21.3■■□□□ 1
CAPN12-202ENST00000593700 GGT6Q6P531 493 aa21.3■■□□□ 1
CAPN12-202ENST00000593700 MROH2AA6NES4 1674 aa21.3■■□□□ 1
CAPN12-202ENST00000593700 MYCNP04198 464 aaPredicted RBP21.27■■□□□ 1
CAPN12-202ENST00000593700 PKD2Q13563 968 aa21.27■■□□□ 1
CAPN12-202ENST00000593700 ABCC3O15438 1527 aa21.25■□□□□ 0.99
CAPN12-202ENST00000593700 ANKRD30BQ9BXX2 1392 aa21.24■□□□□ 0.99
CAPN12-202ENST00000593700 RPRD2Q5VT52 1461 aaKnown RBP21.24■□□□□ 0.99
CAPN12-202ENST00000593700 SETD1BQ9UPS6 1966 aaKnown RBP21.23■□□□□ 0.99
CAPN12-202ENST00000593700 TIMELESSQ9UNS1 1208 aa21.23■□□□□ 0.99
CAPN12-202ENST00000593700 TONSLQ96HA7 1378 aa21.23■□□□□ 0.99
CAPN12-202ENST00000593700 WASHC2CQ9Y4E1 1318 aa21.22■□□□□ 0.99
CAPN12-202ENST00000593700 TRPM2O94759 1503 aa21.21■□□□□ 0.99
CAPN12-202ENST00000593700 CLTCQ00610 1675 aaKnown RBP21.21■□□□□ 0.99
CAPN12-202ENST00000593700 ZMYM3Q14202 1370 aa21.19■□□□□ 0.98
CAPN12-202ENST00000593700 KIF1BO60333 1816 aa21.18■□□□□ 0.98
CAPN12-202ENST00000593700 NEUROD1Q13562 356 aa21.18■□□□□ 0.98
CAPN12-202ENST00000593700 CCDC144AA2RUR9 1427 aa21.18■□□□□ 0.98
CAPN12-202ENST00000593700 NPATQ14207 1427 aa21.18■□□□□ 0.98
CAPN12-202ENST00000593700 C3P01024 1663 aa21.18■□□□□ 0.98
CAPN12-202ENST00000593700 CFAP65Q6ZU64 1925 aaKnown RBP21.17■□□□□ 0.98
CAPN12-202ENST00000593700 SIN3AQ96ST3 1273 aa21.16■□□□□ 0.98
CAPN12-202ENST00000593700 PREX1Q8TCU6 1659 aa21.15■□□□□ 0.98
CAPN12-202ENST00000593700 ARHGAP31Q2M1Z3 1444 aa21.13■□□□□ 0.97
CAPN12-202ENST00000593700 CLTCL1P53675 1640 aa21.12■□□□□ 0.97
CAPN12-202ENST00000593700 PTPRTO14522 1441 aa21.11■□□□□ 0.97
CAPN12-202ENST00000593700 DCAF8L1A6NGE4 600 aa21.1■□□□□ 0.97
CAPN12-202ENST00000593700 ATXN8OSP0DMR3 200 aa21.09■□□□□ 0.97
CAPN12-202ENST00000593700 CEBPAP49715 358 aaPredicted RBP21.09■□□□□ 0.97
CAPN12-202ENST00000593700 NEURL4Q96JN8 1562 aa21.09■□□□□ 0.97
CAPN12-202ENST00000593700 UHRF1BP1Q6BDS2 1440 aa21.08■□□□□ 0.97
CAPN12-202ENST00000593700 PLA2R1Q13018 1463 aa21.07■□□□□ 0.96
CAPN12-202ENST00000593700 PIK3C2BO00750 1634 aa21.05■□□□□ 0.96
CAPN12-202ENST00000593700 SYNMO15061 1565 aa21.02■□□□□ 0.96
CAPN12-202ENST00000593700 TNRQ92752 1358 aa21.02■□□□□ 0.96
CAPN12-202ENST00000593700 NOS1P29475 1434 aa21.02■□□□□ 0.96
CAPN12-202ENST00000593700 SPATA31D1Q6ZQQ2 1576 aa21.02■□□□□ 0.95
CAPN12-202ENST00000593700 ERVK-7P63135 1459 aa21.01■□□□□ 0.95
CAPN12-202ENST00000593700 LMTK3Q96Q04 1460 aa21.01■□□□□ 0.95
CAPN12-202ENST00000593700 NLRP1Q9C000 1473 aa21.01■□□□□ 0.95
CAPN12-202ENST00000593700 IFT172Q9UG01 1749 aa20.98■□□□□ 0.95
CAPN12-202ENST00000593700 ZNF142P52746 1687 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms