RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-236ENST00000592051 KDM4FA0A1W2PPD8 638 aa17.01■□□□□ 0.31
CIRBP-236ENST00000592051 PCGF6Q9BYE7 350 aa17.01■□□□□ 0.31
CIRBP-236ENST00000592051 RNF17Q9BXT8 1623 aaKnown RBP17■□□□□ 0.31
CIRBP-236ENST00000592051 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.99■□□□□ 0.31
CIRBP-236ENST00000592051 ADAMTSL3P82987 1691 aa16.97■□□□□ 0.31
CIRBP-236ENST00000592051 PRDM15P57071 1507 aaPredicted RBP16.97■□□□□ 0.31
CIRBP-236ENST00000592051 DEPDC5O75140 1603 aa16.97■□□□□ 0.31
CIRBP-236ENST00000592051 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
CIRBP-236ENST00000592051 VWDEQ8N2E2 1590 aa16.97■□□□□ 0.31
CIRBP-236ENST00000592051 UNC13BO14795 1591 aa16.96■□□□□ 0.31
CIRBP-236ENST00000592051 KDM5DQ9BY66 1539 aa16.96■□□□□ 0.3
CIRBP-236ENST00000592051 NUP155O75694 1391 aa16.95■□□□□ 0.3
CIRBP-236ENST00000592051 HRCP23327 699 aa16.95■□□□□ 0.3
CIRBP-236ENST00000592051 ABCC3O15438 1527 aa16.95■□□□□ 0.3
CIRBP-236ENST00000592051 WASHC2CQ9Y4E1 1318 aa16.94■□□□□ 0.3
CIRBP-236ENST00000592051 MADDQ8WXG6 1647 aa16.93■□□□□ 0.3
CIRBP-236ENST00000592051 PZPP20742 1482 aa16.93■□□□□ 0.3
CIRBP-236ENST00000592051 LMTK2Q8IWU2 1503 aa16.91■□□□□ 0.3
CIRBP-236ENST00000592051 TRIM52Q96A61 297 aa16.91■□□□□ 0.3
CIRBP-236ENST00000592051 KANK1Q14678 1352 aa16.9■□□□□ 0.3
CIRBP-236ENST00000592051 CEBPAP49715 358 aaPredicted RBP16.9■□□□□ 0.3
CIRBP-236ENST00000592051 FAM135AQ9P2D6 1515 aa16.9■□□□□ 0.3
CIRBP-236ENST00000592051 ZMYM3Q14202 1370 aa16.89■□□□□ 0.3
CIRBP-236ENST00000592051 CNTLNQ9NXG0 1405 aa16.89■□□□□ 0.29
CIRBP-236ENST00000592051 IQGAP3Q86VI3 1631 aa16.88■□□□□ 0.29
CIRBP-236ENST00000592051 PTPRMP28827 1452 aa16.87■□□□□ 0.29
CIRBP-236ENST00000592051 ESF1Q9H501 851 aaKnown RBP16.87■□□□□ 0.29
CIRBP-236ENST00000592051 CLTCQ00610 1675 aaKnown RBP16.87■□□□□ 0.29
CIRBP-236ENST00000592051 FBXO31Q5XUX0 539 aaPredicted RBP16.86■□□□□ 0.29
CIRBP-236ENST00000592051 MPHOSPH9Q99550 1183 aa16.86■□□□□ 0.29
CIRBP-236ENST00000592051 NPATQ14207 1427 aa16.86■□□□□ 0.29
CIRBP-236ENST00000592051 ARHGAP31Q2M1Z3 1444 aa16.86■□□□□ 0.29
CIRBP-236ENST00000592051 RIMS1Q86UR5 1692 aaKnown RBP16.85■□□□□ 0.29
CIRBP-236ENST00000592051 FER1L4A9Z1Z3 1794 aa16.85■□□□□ 0.29
CIRBP-236ENST00000592051 CEP152O94986 1710 aa16.84■□□□□ 0.29
CIRBP-236ENST00000592051 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
CIRBP-236ENST00000592051 EFCAB6Q5THR3 1501 aa16.84■□□□□ 0.29
CIRBP-236ENST00000592051 PKD2Q13563 968 aa16.83■□□□□ 0.28
CIRBP-236ENST00000592051 ZC3H13Q5T200 1668 aaKnown RBP16.83■□□□□ 0.28
CIRBP-236ENST00000592051 ACIN1Q9UKV3 1341 aaKnown RBP16.83■□□□□ 0.28
CIRBP-236ENST00000592051 CAMSAP1Q5T5Y3 1602 aa16.82■□□□□ 0.28
CIRBP-236ENST00000592051 FOXD1Q16676 465 aa16.82■□□□□ 0.28
CIRBP-236ENST00000592051 MROH2AA6NES4 1674 aa16.81■□□□□ 0.28
CIRBP-236ENST00000592051 TET3O43151 1660 aa16.81■□□□□ 0.28
CIRBP-236ENST00000592051 PLPPR3Q6T4P5 718 aa16.81■□□□□ 0.28
CIRBP-236ENST00000592051 PLA2R1Q13018 1463 aa16.8■□□□□ 0.28
CIRBP-236ENST00000592051 NOS1P29475 1434 aa16.79■□□□□ 0.28
CIRBP-236ENST00000592051 C3P01024 1663 aa16.79■□□□□ 0.28
CIRBP-236ENST00000592051 ERVK-7P63135 1459 aa16.79■□□□□ 0.28
CIRBP-236ENST00000592051 RPRD2Q5VT52 1461 aaKnown RBP16.78■□□□□ 0.28
CIRBP-236ENST00000592051 E9PCH4 1651 aa16.78■□□□□ 0.28
CIRBP-236ENST00000592051 PTPRTO14522 1441 aa16.78■□□□□ 0.28
CIRBP-236ENST00000592051 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.28
CIRBP-236ENST00000592051 SPATA31D1Q6ZQQ2 1576 aa16.76■□□□□ 0.27
CIRBP-236ENST00000592051 TNRQ92752 1358 aa16.75■□□□□ 0.27
CIRBP-236ENST00000592051 SYNMO15061 1565 aa16.73■□□□□ 0.27
CIRBP-236ENST00000592051 ANKRD30BQ9BXX2 1392 aa16.72■□□□□ 0.27
CIRBP-236ENST00000592051 PREX1Q8TCU6 1659 aa16.72■□□□□ 0.27
CIRBP-236ENST00000592051 UGGT1Q9NYU2 1555 aa16.71■□□□□ 0.27
CIRBP-236ENST00000592051 IDI1Q13907 227 aa16.7■□□□□ 0.26
CIRBP-236ENST00000592051 TRPM2O94759 1503 aa16.68■□□□□ 0.26
CIRBP-236ENST00000592051 SLC52A1Q9NWF4 448 aa16.66■□□□□ 0.26
CIRBP-236ENST00000592051 PIK3C2BO00750 1634 aa16.65■□□□□ 0.26
CIRBP-236ENST00000592051 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
CIRBP-236ENST00000592051 CLTCL1P53675 1640 aa16.64■□□□□ 0.25
CIRBP-236ENST00000592051 A2ML1A8K2U0 1454 aa16.64■□□□□ 0.25
CIRBP-236ENST00000592051 SPHKAPQ2M3C7 1700 aa16.64■□□□□ 0.25
CIRBP-236ENST00000592051 MYO3AQ8NEV4 1616 aa16.63■□□□□ 0.25
CIRBP-236ENST00000592051 CFAP65Q6ZU64 1925 aaKnown RBP16.63■□□□□ 0.25
CIRBP-236ENST00000592051 UHRF1BP1Q6BDS2 1440 aa16.62■□□□□ 0.25
CIRBP-236ENST00000592051 LMTK3Q96Q04 1460 aa16.62■□□□□ 0.25
CIRBP-236ENST00000592051 SIN3AQ96ST3 1273 aa16.62■□□□□ 0.25
CIRBP-236ENST00000592051 CCDC144AA2RUR9 1427 aa16.61■□□□□ 0.25
CIRBP-236ENST00000592051 CEP170BQ9Y4F5 1589 aaPredicted RBP16.6■□□□□ 0.25
CIRBP-236ENST00000592051 SPATA31E1Q6ZUB1 1445 aa16.6■□□□□ 0.25
CIRBP-236ENST00000592051 HSPA2P54652 639 aa16.58■□□□□ 0.24
CIRBP-236ENST00000592051 AEBP2Q6ZN18 517 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-236ENST00000592051 SETD1BQ9UPS6 1966 aaKnown RBP16.58■□□□□ 0.24
CIRBP-236ENST00000592051 TMEM131LA2VDJ0 1609 aa16.57■□□□□ 0.24
CIRBP-236ENST00000592051 ADGRB3O60242 1522 aa16.57■□□□□ 0.24
CIRBP-236ENST00000592051 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
CIRBP-236ENST00000592051 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-236ENST00000592051 THEMISQ8N1K5 641 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-236ENST00000592051 CCER1Q8TC90 406 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-236ENST00000592051 TMEM2Q9UHN6 1383 aa16.54■□□□□ 0.24
CIRBP-236ENST00000592051 UBR1Q8IWV7 1749 aa16.54■□□□□ 0.24
CIRBP-236ENST00000592051 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
CIRBP-236ENST00000592051 ARHGAP23Q9P227 1491 aa16.54■□□□□ 0.24
CIRBP-236ENST00000592051 LTKP29376 864 aa16.53■□□□□ 0.24
CIRBP-236ENST00000592051 NEUROD1Q13562 356 aa16.53■□□□□ 0.24
CIRBP-236ENST00000592051 RGL3Q3MIN7 710 aa16.53■□□□□ 0.24
CIRBP-236ENST00000592051 ZFYVE9O95405 1425 aa16.53■□□□□ 0.24
CIRBP-236ENST00000592051 CLSPNQ9HAW4 1339 aa16.52■□□□□ 0.24
CIRBP-236ENST00000592051 SLIT1O75093 1534 aa16.51■□□□□ 0.23
CIRBP-236ENST00000592051 RIMS2Q9UQ26 1411 aa16.51■□□□□ 0.23
CIRBP-236ENST00000592051 NEURL4Q96JN8 1562 aa16.51■□□□□ 0.23
CIRBP-236ENST00000592051 KDM5AP29375 1690 aaKnown RBP16.5■□□□□ 0.23
CIRBP-236ENST00000592051 NCKAP5LQ9HCH0 1330 aa16.49■□□□□ 0.23
CIRBP-236ENST00000592051 ZNF326Q5BKZ1 582 aaKnown RBP16.49■□□□□ 0.23
CIRBP-236ENST00000592051 NUTM2DQ5VT03 806 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms