RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 KDM2AQ9Y2K7 1162 aa27.39■■□□□ 1.98
MBD3-209ENST00000592012 RTEL1-TNFRSF6BF6WH68 1400 aa27.38■■□□□ 1.97
MBD3-209ENST00000592012 SPAG9O60271 1321 aaKnown RBP27.38■■□□□ 1.97
MBD3-209ENST00000592012 ABCA9Q8IUA7 1624 aa27.37■■□□□ 1.97
MBD3-209ENST00000592012 BCORL1Q5H9F3 1711 aa27.35■■□□□ 1.97
MBD3-209ENST00000592012 FANCAO15360 1455 aa27.34■■□□□ 1.97
MBD3-209ENST00000592012 CARD11Q9BXL7 1154 aa27.34■■□□□ 1.97
MBD3-209ENST00000592012 ASXL2Q76L83 1435 aa27.34■■□□□ 1.97
MBD3-209ENST00000592012 PRKRIP1Q9H875 184 aaPredicted RBP27.33■■□□□ 1.96
MBD3-209ENST00000592012 ZFYVE16Q7Z3T8 1539 aa27.33■■□□□ 1.96
MBD3-209ENST00000592012 ATP10AO60312 1499 aa27.32■■□□□ 1.96
MBD3-209ENST00000592012 ARID4BQ4LE39 1312 aaPredicted RBP27.3■■□□□ 1.96
MBD3-209ENST00000592012 SUPT16HQ9Y5B9 1047 aaKnown RBP27.28■■□□□ 1.96
MBD3-209ENST00000592012 RGL3Q3MIN7 710 aa27.27■■□□□ 1.96
MBD3-209ENST00000592012 PRAG1Q86YV5 1406 aa27.26■■□□□ 1.96
MBD3-209ENST00000592012 ADGRL1O94910 1474 aa27.24■■□□□ 1.95
MBD3-209ENST00000592012 A2MP01023 1474 aa27.24■■□□□ 1.95
MBD3-209ENST00000592012 SCAPERQ9BY12 1400 aa27.23■■□□□ 1.95
MBD3-209ENST00000592012 ROCK2O75116 1388 aaKnown RBP27.23■■□□□ 1.95
MBD3-209ENST00000592012 ST20-MTHFSA0A0A6YYL1 179 aa27.22■■□□□ 1.95
MBD3-209ENST00000592012 CCDC184Q52MB2 194 aa27.22■■□□□ 1.95
MBD3-209ENST00000592012 INO80Q9ULG1 1556 aaPredicted RBP27.22■■□□□ 1.95
MBD3-209ENST00000592012 ATP7AQ04656 1500 aa27.22■■□□□ 1.95
MBD3-209ENST00000592012 NPM1P06748 294 aaKnown RBP eCLIP27.21■■□□□ 1.95
MBD3-209ENST00000592012 TRPM1Q7Z4N2 1603 aa27.21■■□□□ 1.95
MBD3-209ENST00000592012 DHX29Q7Z478 1369 aaKnown RBP27.19■■□□□ 1.94
MBD3-209ENST00000592012 DEPDC5O75140 1603 aa27.19■■□□□ 1.94
MBD3-209ENST00000592012 POLR3GLQ9BT43 218 aa27.17■■□□□ 1.94
MBD3-209ENST00000592012 E9PCH4 1651 aa27.17■■□□□ 1.94
MBD3-209ENST00000592012 GPRASP1Q5JY77 1395 aa27.15■■□□□ 1.94
MBD3-209ENST00000592012 HNRNPUQ00839 825 aaKnown RBP eCLIP27.15■■□□□ 1.94
MBD3-209ENST00000592012 NBPF1Q3BBV0 1214 aa27.15■■□□□ 1.94
MBD3-209ENST00000592012 MRS2Q9HD23 443 aa27.12■■□□□ 1.93
MBD3-209ENST00000592012 MYT1LQ9UL68 1186 aa27.11■■□□□ 1.93
MBD3-209ENST00000592012 PTPRTO14522 1441 aa27.11■■□□□ 1.93
MBD3-209ENST00000592012 VWDEQ8N2E2 1590 aa27.1■■□□□ 1.93
MBD3-209ENST00000592012 KIF3BO15066 747 aa27.1■■□□□ 1.93
MBD3-209ENST00000592012 TRPM2O94759 1503 aa27.09■■□□□ 1.93
MBD3-209ENST00000592012 TET3O43151 1660 aa27.08■■□□□ 1.93
MBD3-209ENST00000592012 KANK1Q14678 1352 aa27.08■■□□□ 1.93
MBD3-209ENST00000592012 PELP1Q8IZL8 1130 aaKnown RBP27.08■■□□□ 1.93
MBD3-209ENST00000592012 LAMC1P11047 1609 aa27.07■■□□□ 1.92
MBD3-209ENST00000592012 EIF2AK4Q9P2K8 1649 aaKnown RBP27.07■■□□□ 1.92
MBD3-209ENST00000592012 CD109Q6YHK3 1445 aa27.07■■□□□ 1.92
MBD3-209ENST00000592012 KIDINS220Q9ULH0 1771 aa27.06■■□□□ 1.92
MBD3-209ENST00000592012 SPHKAPQ2M3C7 1700 aa27.06■■□□□ 1.92
MBD3-209ENST00000592012 ZNF518AQ6AHZ1 1483 aa27.05■■□□□ 1.92
MBD3-209ENST00000592012 PRDM15P57071 1507 aaPredicted RBP27.04■■□□□ 1.92
MBD3-209ENST00000592012 FAM9BQ8IZU0 186 aa27.04■■□□□ 1.92
MBD3-209ENST00000592012 MROH1Q8NDA8 1641 aa27.03■■□□□ 1.92
MBD3-209ENST00000592012 CEP152O94986 1710 aa27.01■■□□□ 1.91
MBD3-209ENST00000592012 FKBP8Q14318 412 aa27■■□□□ 1.91
MBD3-209ENST00000592012 CLTCL1P53675 1640 aa27■■□□□ 1.91
MBD3-209ENST00000592012 CFAP74Q9C0B2 1584 aa26.99■■□□□ 1.91
MBD3-209ENST00000592012 TESK2Q96S53 571 aa26.98■■□□□ 1.91
MBD3-209ENST00000592012 STAC3Q96MF2 364 aa26.97■■□□□ 1.91
MBD3-209ENST00000592012 POGZQ7Z3K3 1410 aa26.97■■□□□ 1.91
MBD3-209ENST00000592012 CNGB1Q14028 1251 aaPredicted RBP26.97■■□□□ 1.91
MBD3-209ENST00000592012 RNF17Q9BXT8 1623 aaKnown RBP26.95■■□□□ 1.9
MBD3-209ENST00000592012 MADDQ8WXG6 1647 aa26.94■■□□□ 1.9
MBD3-209ENST00000592012 MLH3Q9UHC1 1453 aa26.93■■□□□ 1.9
MBD3-209ENST00000592012 NEFLP07196 543 aa26.92■■□□□ 1.9
MBD3-209ENST00000592012 COL17A1Q9UMD9 1497 aaPredicted RBP26.92■■□□□ 1.9
MBD3-209ENST00000592012 EFCAB6Q5THR3 1501 aa26.9■■□□□ 1.9
MBD3-209ENST00000592012 ZBED9Q6R2W3 1325 aa26.9■■□□□ 1.9
MBD3-209ENST00000592012 DISP3Q9P2K9 1392 aa26.9■■□□□ 1.9
MBD3-209ENST00000592012 NEURL4Q96JN8 1562 aa26.89■■□□□ 1.9
MBD3-209ENST00000592012 KTN1Q86UP2 1357 aaKnown RBP26.89■■□□□ 1.89
MBD3-209ENST00000592012 LMTK2Q8IWU2 1503 aa26.89■■□□□ 1.89
MBD3-209ENST00000592012 RALBP1Q15311 655 aa26.86■■□□□ 1.89
MBD3-209ENST00000592012 HECW2Q9P2P5 1572 aa26.86■■□□□ 1.89
MBD3-209ENST00000592012 NEO1Q92859 1461 aa26.86■■□□□ 1.89
MBD3-209ENST00000592012 FRMPD1Q5SYB0 1578 aa26.86■■□□□ 1.89
MBD3-209ENST00000592012 PPRC1Q5VV67 1664 aaKnown RBP26.86■■□□□ 1.89
MBD3-209ENST00000592012 PER1O15534 1290 aaPredicted RBP26.85■■□□□ 1.89
MBD3-209ENST00000592012 TMF1P82094 1093 aa26.85■■□□□ 1.89
MBD3-209ENST00000592012 BCANQ96GW7 911 aa26.85■■□□□ 1.89
MBD3-209ENST00000592012 UGGT1Q9NYU2 1555 aa26.84■■□□□ 1.89
MBD3-209ENST00000592012 PNISRQ8TF01 805 aaKnown RBP26.83■■□□□ 1.89
MBD3-209ENST00000592012 TMC1Q8TDI8 760 aa26.82■■□□□ 1.88
MBD3-209ENST00000592012 IQGAP1P46940 1657 aa26.82■■□□□ 1.88
MBD3-209ENST00000592012 MYBBP1AQ9BQG0 1328 aaKnown RBP26.82■■□□□ 1.88
MBD3-209ENST00000592012 RAPGEF3O95398 923 aa26.8■■□□□ 1.88
MBD3-209ENST00000592012 RIMBP3CA6NJZ7 1639 aa26.8■■□□□ 1.88
MBD3-209ENST00000592012 RIMBP3BA6NNM3 1639 aa26.8■■□□□ 1.88
MBD3-209ENST00000592012 RIMBP3Q9UFD9 1639 aa26.8■■□□□ 1.88
MBD3-209ENST00000592012 KIF1BO60333 1816 aa26.79■■□□□ 1.88
MBD3-209ENST00000592012 ABCA6Q8N139 1617 aa26.79■■□□□ 1.88
MBD3-209ENST00000592012 BRD4O60885 1362 aaPredicted RBP26.79■■□□□ 1.88
MBD3-209ENST00000592012 SCAF11Q99590 1463 aaKnown RBP26.78■■□□□ 1.88
MBD3-209ENST00000592012 GGT6Q6P531 493 aa26.78■■□□□ 1.88
MBD3-209ENST00000592012 PARD3Q8TEW0 1356 aa26.77■■□□□ 1.88
MBD3-209ENST00000592012 CYB5RLQ6IPT4 315 aa26.77■■□□□ 1.88
MBD3-209ENST00000592012 WASHC2CQ9Y4E1 1318 aa26.76■■□□□ 1.88
MBD3-209ENST00000592012 KIAA1210Q9ULL0 1709 aa26.76■■□□□ 1.88
MBD3-209ENST00000592012 MYOM2P54296 1465 aa26.75■■□□□ 1.87
MBD3-209ENST00000592012 PANK3Q9H999 370 aa26.75■■□□□ 1.87
MBD3-209ENST00000592012 NPATQ14207 1427 aa26.74■■□□□ 1.87
MBD3-209ENST00000592012 MAP3K4Q9Y6R4 1608 aa26.74■■□□□ 1.87
MBD3-209ENST00000592012 ADGRF5Q8IZF2 1346 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms