RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 AGLP35573 1532 aa22.45■■□□□ 1.18
DDX39A-211ENST00000590239 UNC13BO14795 1591 aa22.45■■□□□ 1.18
DDX39A-211ENST00000590239 TRIM52Q96A61 297 aa22.44■■□□□ 1.18
DDX39A-211ENST00000590239 DEPDC5O75140 1603 aa22.42■■□□□ 1.18
DDX39A-211ENST00000590239 KDM5DQ9BY66 1539 aa22.42■■□□□ 1.18
DDX39A-211ENST00000590239 RNF17Q9BXT8 1623 aaKnown RBP22.42■■□□□ 1.18
DDX39A-211ENST00000590239 NUP155O75694 1391 aa22.4■■□□□ 1.18
DDX39A-211ENST00000590239 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
DDX39A-211ENST00000590239 PRDM15P57071 1507 aaPredicted RBP22.38■■□□□ 1.17
DDX39A-211ENST00000590239 KANK1Q14678 1352 aa22.38■■□□□ 1.17
DDX39A-211ENST00000590239 MROH1Q8NDA8 1641 aa22.37■■□□□ 1.17
DDX39A-211ENST00000590239 PZPP20742 1482 aa22.36■■□□□ 1.17
DDX39A-211ENST00000590239 MPHOSPH9Q99550 1183 aa22.36■■□□□ 1.17
DDX39A-211ENST00000590239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.36■■□□□ 1.178e-8■■■□□ 17.9
DDX39A-211ENST00000590239 IQGAP3Q86VI3 1631 aa22.35■■□□□ 1.17
DDX39A-211ENST00000590239 VWDEQ8N2E2 1590 aa22.35■■□□□ 1.17
DDX39A-211ENST00000590239 SIGLEC1Q9BZZ2 1709 aa22.34■■□□□ 1.17
DDX39A-211ENST00000590239 FAM135AQ9P2D6 1515 aa22.33■■□□□ 1.17
DDX39A-211ENST00000590239 GGT6Q6P531 493 aa22.33■■□□□ 1.17
DDX39A-211ENST00000590239 CCER1Q8TC90 406 aaPredicted RBP22.33■■□□□ 1.17
DDX39A-211ENST00000590239 SLC4A1APQ9BWU0 796 aaKnown RBP22.33■■□□□ 1.17
DDX39A-211ENST00000590239 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
DDX39A-211ENST00000590239 LMTK2Q8IWU2 1503 aa22.29■■□□□ 1.16
DDX39A-211ENST00000590239 ARID4BQ4LE39 1312 aaPredicted RBP22.29■■□□□ 1.16
DDX39A-211ENST00000590239 CLSPNQ9HAW4 1339 aa22.29■■□□□ 1.16
DDX39A-211ENST00000590239 WASHC2CQ9Y4E1 1318 aa22.26■■□□□ 1.15
DDX39A-211ENST00000590239 ABCC3O15438 1527 aa22.26■■□□□ 1.15
DDX39A-211ENST00000590239 PKD2Q13563 968 aa22.25■■□□□ 1.15
DDX39A-211ENST00000590239 TET3O43151 1660 aa22.25■■□□□ 1.15
DDX39A-211ENST00000590239 ZC3H13Q5T200 1668 aaKnown RBP22.25■■□□□ 1.15
DDX39A-211ENST00000590239 CEP152O94986 1710 aa22.21■■□□□ 1.15
DDX39A-211ENST00000590239 MLECQ14165 292 aa22.21■■□□□ 1.15
DDX39A-211ENST00000590239 EFCAB6Q5THR3 1501 aa22.21■■□□□ 1.15
DDX39A-211ENST00000590239 RPRD2Q5VT52 1461 aaKnown RBP22.18■■□□□ 1.14
DDX39A-211ENST00000590239 ARHGAP31Q2M1Z3 1444 aa22.18■■□□□ 1.14
DDX39A-211ENST00000590239 CAMSAP1Q5T5Y3 1602 aa22.17■■□□□ 1.14
DDX39A-211ENST00000590239 CNTLNQ9NXG0 1405 aa22.17■■□□□ 1.14
DDX39A-211ENST00000590239 ANKRD30BQ9BXX2 1392 aa22.17■■□□□ 1.14
DDX39A-211ENST00000590239 FOXD1Q16676 465 aa22.17■■□□□ 1.14
DDX39A-211ENST00000590239 E9PCH4 1651 aa22.17■■□□□ 1.14
DDX39A-211ENST00000590239 ESF1Q9H501 851 aaKnown RBP22.16■■□□□ 1.14
DDX39A-211ENST00000590239 NPATQ14207 1427 aa22.14■■□□□ 1.13
DDX39A-211ENST00000590239 CLTCQ00610 1675 aaKnown RBP22.14■■□□□ 1.13
DDX39A-211ENST00000590239 FBXO41Q8TF61 875 aa22.12■■□□□ 1.13
DDX39A-211ENST00000590239 PTPRTO14522 1441 aa22.12■■□□□ 1.13
DDX39A-211ENST00000590239 MROH2AA6NES4 1674 aa22.11■■□□□ 1.13
DDX39A-211ENST00000590239 PLA2R1Q13018 1463 aa22.1■■□□□ 1.13
DDX39A-211ENST00000590239 ZMYM3Q14202 1370 aa22.08■■□□□ 1.12
DDX39A-211ENST00000590239 ADAMTSL3P82987 1691 aa22.07■■□□□ 1.12
DDX39A-211ENST00000590239 FER1L4A9Z1Z3 1794 aa22.07■■□□□ 1.12
DDX39A-211ENST00000590239 SPHKAPQ2M3C7 1700 aa22.07■■□□□ 1.12
DDX39A-211ENST00000590239 TRPM2O94759 1503 aa22.06■■□□□ 1.12
DDX39A-211ENST00000590239 NOS1P29475 1434 aa22.06■■□□□ 1.12
DDX39A-211ENST00000590239 SIN3AQ96ST3 1273 aa22.05■■□□□ 1.12
DDX39A-211ENST00000590239 CCDC144AA2RUR9 1427 aa22.04■■□□□ 1.12
DDX39A-211ENST00000590239 MADDQ8WXG6 1647 aa22.03■■□□□ 1.12
DDX39A-211ENST00000590239 ZEB1P37275 1124 aaPredicted RBP22.03■■□□□ 1.12
DDX39A-211ENST00000590239 ERVK-7P63135 1459 aa22.02■■□□□ 1.12
DDX39A-211ENST00000590239 PREX1Q8TCU6 1659 aa22.01■■□□□ 1.11
DDX39A-211ENST00000590239 NEUROD1Q13562 356 aa22.01■■□□□ 1.11
DDX39A-211ENST00000590239 SPATA31D1Q6ZQQ2 1576 aa22■■□□□ 1.11
DDX39A-211ENST00000590239 TIMELESSQ9UNS1 1208 aa22■■□□□ 1.11
DDX39A-211ENST00000590239 FBXO31Q5XUX0 539 aaPredicted RBP21.99■■□□□ 1.11
DDX39A-211ENST00000590239 SYNMO15061 1565 aa21.98■■□□□ 1.11
DDX39A-211ENST00000590239 RIMS1Q86UR5 1692 aaKnown RBP21.98■■□□□ 1.11
DDX39A-211ENST00000590239 SLC52A1Q9NWF4 448 aa21.97■■□□□ 1.11
DDX39A-211ENST00000590239 CFAP65Q6ZU64 1925 aaKnown RBP21.97■■□□□ 1.11
DDX39A-211ENST00000590239 CLTCL1P53675 1640 aa21.97■■□□□ 1.11
DDX39A-211ENST00000590239 C3P01024 1663 aa21.97■■□□□ 1.11
DDX39A-211ENST00000590239 PIK3C2BO00750 1634 aa21.95■■□□□ 1.1
DDX39A-211ENST00000590239 TNRQ92752 1358 aa21.93■■□□□ 1.1
DDX39A-211ENST00000590239 TONSLQ96HA7 1378 aa21.93■■□□□ 1.1
DDX39A-211ENST00000590239 NEURL4Q96JN8 1562 aa21.92■■□□□ 1.1
DDX39A-211ENST00000590239 UGGT1Q9NYU2 1555 aa21.92■■□□□ 1.1
DDX39A-211ENST00000590239 CEBPAP49715 358 aaPredicted RBP21.92■■□□□ 1.1
DDX39A-211ENST00000590239 SPATA31E1Q6ZUB1 1445 aa21.9■■□□□ 1.1
DDX39A-211ENST00000590239 IDI1Q13907 227 aa21.9■■□□□ 1.1
DDX39A-211ENST00000590239 PTPRMP28827 1452 aa21.89■■□□□ 1.09
DDX39A-211ENST00000590239 KIF1BO60333 1816 aa21.87■■□□□ 1.09
DDX39A-211ENST00000590239 NLRP1Q9C000 1473 aa21.86■■□□□ 1.09
DDX39A-211ENST00000590239 L3MBTL2Q969R5 705 aa21.86■■□□□ 1.09
DDX39A-211ENST00000590239 ADGRB3O60242 1522 aa21.85■■□□□ 1.09
DDX39A-211ENST00000590239 LMTK3Q96Q04 1460 aa21.83■■□□□ 1.08
DDX39A-211ENST00000590239 TMEM131LA2VDJ0 1609 aa21.82■■□□□ 1.08
DDX39A-211ENST00000590239 RGL3Q3MIN7 710 aa21.82■■□□□ 1.08
DDX39A-211ENST00000590239 PLPPR3Q6T4P5 718 aa21.82■■□□□ 1.08
DDX39A-211ENST00000590239 CHGAP10645 457 aaKnown RBP21.81■■□□□ 1.08
DDX39A-211ENST00000590239 STAC3Q96MF2 364 aa21.81■■□□□ 1.08
DDX39A-211ENST00000590239 KDM5AP29375 1690 aaKnown RBP21.8■■□□□ 1.08
DDX39A-211ENST00000590239 PPP1R15AO75807 674 aaPredicted RBP21.8■■□□□ 1.08
DDX39A-211ENST00000590239 RPGRIP1LQ68CZ1 1315 aa21.8■■□□□ 1.08
DDX39A-211ENST00000590239 SETD1BQ9UPS6 1966 aaKnown RBP21.78■■□□□ 1.08
DDX39A-211ENST00000590239 STAG3Q9UJ98 1225 aa21.78■■□□□ 1.08
DDX39A-211ENST00000590239 A2ML1A8K2U0 1454 aa21.77■■□□□ 1.08
DDX39A-211ENST00000590239 MYO3AQ8NEV4 1616 aa21.77■■□□□ 1.08
DDX39A-211ENST00000590239 DCAF11Q8TEB1 546 aa21.77■■□□□ 1.08
DDX39A-211ENST00000590239 ZNF326Q5BKZ1 582 aaKnown RBP21.76■■□□□ 1.07
DDX39A-211ENST00000590239 UBR1Q8IWV7 1749 aa21.73■■□□□ 1.07
DDX39A-211ENST00000590239 UHRF1BP1Q6BDS2 1440 aa21.72■■□□□ 1.07
DDX39A-211ENST00000590239 MYO5BQ9ULV0 1848 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms