RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 TAOK2Q9UL54 1235 aa11.25□□□□□ -0.61
SMAD4-210ENST00000590061 UACAQ9BZF9 1416 aa11.25□□□□□ -0.61
SMAD4-210ENST00000590061 L3MBTL3Q96JM7 780 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-210ENST00000590061 SOX12O15370 315 aa11.23□□□□□ -0.61
SMAD4-210ENST00000590061 SLAIN1Q8ND83 568 aa11.23□□□□□ -0.61
SMAD4-210ENST00000590061 UHRF1BP1LA0JNW5 1464 aa11.23□□□□□ -0.61
SMAD4-210ENST00000590061 RAPGEF6Q8TEU7 1601 aa11.22□□□□□ -0.61
SMAD4-210ENST00000590061 PLEKHD1A6NEE1 506 aa11.21□□□□□ -0.61
SMAD4-210ENST00000590061 PHF8Q9UPP1 1060 aa11.21□□□□□ -0.61
SMAD4-210ENST00000590061 STK24Q9Y6E0 443 aa11.21□□□□□ -0.61
SMAD4-210ENST00000590061 STK25O00506 426 aa11.2□□□□□ -0.62
SMAD4-210ENST00000590061 FBXO22Q8NEZ5 403 aa11.2□□□□□ -0.62
SMAD4-210ENST00000590061 TMEM121BQ9BXQ6 578 aaPredicted RBP11.2□□□□□ -0.62
SMAD4-210ENST00000590061 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.2□□□□□ -0.62
SMAD4-210ENST00000590061 ABCA8O94911 1581 aa11.2□□□□□ -0.62
SMAD4-210ENST00000590061 MTUS2Q5JR59 1369 aa11.19□□□□□ -0.62
SMAD4-210ENST00000590061 PCF11O94913 1555 aaKnown RBP11.19□□□□□ -0.62
SMAD4-210ENST00000590061 EPRSP07814 1512 aaKnown RBP11.19□□□□□ -0.62
SMAD4-210ENST00000590061 ABCC2Q92887 1545 aa11.19□□□□□ -0.62
SMAD4-210ENST00000590061 TTBK1Q5TCY1 1321 aaPredicted RBP11.18□□□□□ -0.62
SMAD4-210ENST00000590061 BOLA1Q9Y3E2 137 aa11.18□□□□□ -0.62
SMAD4-210ENST00000590061 TIAM1Q13009 1591 aa11.18□□□□□ -0.62
SMAD4-210ENST00000590061 MFRPQ9BY79 579 aa11.17□□□□□ -0.62
SMAD4-210ENST00000590061 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
SMAD4-210ENST00000590061 NUP153P49790 1475 aaKnown RBP11.16□□□□□ -0.62
SMAD4-210ENST00000590061 PLB1Q6P1J6 1458 aa11.16□□□□□ -0.62
SMAD4-210ENST00000590061 LRRC9Q6ZRR7 1453 aa11.15□□□□□ -0.62
SMAD4-210ENST00000590061 CFAP43Q8NDM7 1665 aa11.14□□□□□ -0.63
SMAD4-210ENST00000590061 TRIM26Q12899 539 aaPredicted RBP11.14□□□□□ -0.63
SMAD4-210ENST00000590061 EHBP1L1Q8N3D4 1523 aa11.14□□□□□ -0.63
SMAD4-210ENST00000590061 KDM5BQ9UGL1 1544 aa11.14□□□□□ -0.63
SMAD4-210ENST00000590061 MICALL2Q8IY33 904 aa11.13□□□□□ -0.63
SMAD4-210ENST00000590061 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
SMAD4-210ENST00000590061 ATP10BO94823 1461 aa11.12□□□□□ -0.63
SMAD4-210ENST00000590061 TROQ12816 1431 aaPredicted RBP11.12□□□□□ -0.63
SMAD4-210ENST00000590061 NLRP6P59044 892 aa11.12□□□□□ -0.63
SMAD4-210ENST00000590061 ERCC6L2Q5T890 1561 aa11.11□□□□□ -0.63
SMAD4-210ENST00000590061 FAM163AQ96GL9 167 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-210ENST00000590061 SUPT6HQ7KZ85 1726 aaKnown RBP11.09□□□□□ -0.63
SMAD4-210ENST00000590061 POTEMA6NI47 508 aa11.09□□□□□ -0.63
SMAD4-210ENST00000590061 KANK4Q5T7N3 995 aaPredicted RBP11.08□□□□□ -0.64
SMAD4-210ENST00000590061 POTEGQ6S5H5 508 aa11.08□□□□□ -0.64
SMAD4-210ENST00000590061 TMEM92Q6UXU6 159 aa11.08□□□□□ -0.64
SMAD4-210ENST00000590061 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.07□□□□□ -0.643e-7■□□□□ 10.7
SMAD4-210ENST00000590061 ACIN1Q9UKV3 1341 aaKnown RBP11.07□□□□□ -0.64
SMAD4-210ENST00000590061 CCNB3Q8WWL7 1395 aa11.06□□□□□ -0.64
SMAD4-210ENST00000590061 CDK13Q14004 1512 aaKnown RBP11.06□□□□□ -0.64
SMAD4-210ENST00000590061 G3V3G9 751 aa11.06□□□□□ -0.64
SMAD4-210ENST00000590061 ST18O60284 1047 aa11.06□□□□□ -0.64
SMAD4-210ENST00000590061 MIA2Q96PC5 1412 aa11.06□□□□□ -0.64
SMAD4-210ENST00000590061 KIF14Q15058 1648 aa11.06□□□□□ -0.64
SMAD4-210ENST00000590061 ADCY10Q96PN6 1610 aa11.06□□□□□ -0.64
SMAD4-210ENST00000590061 RSPH4AQ5TD94 716 aa11.05□□□□□ -0.64
SMAD4-210ENST00000590061 ZCCHC11Q5TAX3 1644 aaKnown RBP11.04□□□□□ -0.64
SMAD4-210ENST00000590061 NCOA2Q15596 1464 aa11.04□□□□□ -0.64
SMAD4-210ENST00000590061 WDR7Q9Y4E6 1490 aa11.04□□□□□ -0.64
SMAD4-210ENST00000590061 MYOM3Q5VTT5 1437 aa11.03□□□□□ -0.64
SMAD4-210ENST00000590061 ARID3CA6NKF2 412 aa11.03□□□□□ -0.64
SMAD4-210ENST00000590061 MAPKBP1O60336 1514 aa11.03□□□□□ -0.64
SMAD4-210ENST00000590061 SNPHO15079 494 aa11.02□□□□□ -0.65
SMAD4-210ENST00000590061 CFDP1Q9UEE9 299 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-210ENST00000590061 ASXL2Q76L83 1435 aa11.01□□□□□ -0.65
SMAD4-210ENST00000590061 RRBP1Q9P2E9 1410 aaKnown RBP11.01□□□□□ -0.65
SMAD4-210ENST00000590061 LRRIQ1Q96JM4 1722 aa11.01□□□□□ -0.65
SMAD4-210ENST00000590061 CHGAP10645 457 aaKnown RBP11.01□□□□□ -0.65
SMAD4-210ENST00000590061 ITSN2Q9NZM3 1697 aa11.01□□□□□ -0.65
SMAD4-210ENST00000590061 HOXB3P14651 431 aaPredicted RBP11□□□□□ -0.65
SMAD4-210ENST00000590061 NKX1-1Q15270 411 aaPredicted RBP11□□□□□ -0.65
SMAD4-210ENST00000590061 EFCAB2Q5VUJ9 269 aa11□□□□□ -0.65
SMAD4-210ENST00000590061 PPARGC1BQ86YN6 1023 aaKnown RBP11□□□□□ -0.65
SMAD4-210ENST00000590061 PHLDB1Q86UU1 1377 aa11□□□□□ -0.65
SMAD4-210ENST00000590061 PLEKHH2Q8IVE3 1493 aa11□□□□□ -0.65
SMAD4-210ENST00000590061 ARAP3Q8WWN8 1544 aa10.99□□□□□ -0.65
SMAD4-210ENST00000590061 KCNH8Q96L42 1107 aa10.99□□□□□ -0.65
SMAD4-210ENST00000590061 FGD6Q6ZV73 1430 aa10.99□□□□□ -0.65
SMAD4-210ENST00000590061 PPP1R37O75864 691 aa10.98□□□□□ -0.65
SMAD4-210ENST00000590061 MAGI3Q5TCQ9 1506 aa10.96□□□□□ -0.65
SMAD4-210ENST00000590061 GPATCH8Q9UKJ3 1502 aaKnown RBP10.96□□□□□ -0.65
SMAD4-210ENST00000590061 ABCC10Q5T3U5 1492 aa10.95□□□□□ -0.66
SMAD4-210ENST00000590061 PLCH2O75038 1416 aa10.95□□□□□ -0.66
SMAD4-210ENST00000590061 FAM50AQ14320 339 aaKnown RBP10.95□□□□□ -0.66
SMAD4-210ENST00000590061 KIAA1107Q9UPP5 1409 aa10.94□□□□□ -0.66
SMAD4-210ENST00000590061 KIF3CO14782 793 aa10.94□□□□□ -0.66
SMAD4-210ENST00000590061 ABCA9Q8IUA7 1624 aa10.94□□□□□ -0.66
SMAD4-210ENST00000590061 GLI2P10070 1586 aa10.94□□□□□ -0.66
SMAD4-210ENST00000590061 TCOF1Q13428 1488 aaKnown RBP10.93□□□□□ -0.66
SMAD4-210ENST00000590061 MYO5CQ9NQX4 1742 aa10.93□□□□□ -0.66
SMAD4-210ENST00000590061 TSPY4P0CV99 314 aa10.93□□□□□ -0.66
SMAD4-210ENST00000590061 TSPY10P0CW01 314 aa10.93□□□□□ -0.66
SMAD4-210ENST00000590061 PCGF6Q9BYE7 350 aa10.93□□□□□ -0.66
SMAD4-210ENST00000590061 CFAP74Q9C0B2 1584 aa10.93□□□□□ -0.66
SMAD4-210ENST00000590061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.93□□□□□ -0.663e-12■□□□□ 9.1
SMAD4-210ENST00000590061 CD109Q6YHK3 1445 aa10.92□□□□□ -0.66
SMAD4-210ENST00000590061 PTPN23Q9H3S7 1636 aa10.91□□□□□ -0.66
SMAD4-210ENST00000590061 ARHGAP5Q13017 1502 aa10.91□□□□□ -0.66
SMAD4-210ENST00000590061 HRCP23327 699 aa10.91□□□□□ -0.66
SMAD4-210ENST00000590061 TEX14Q8IWB6 1497 aa10.91□□□□□ -0.66
SMAD4-210ENST00000590061 PREX2Q70Z35 1606 aa10.91□□□□□ -0.66
SMAD4-210ENST00000590061 FAM69CQ0P6D2 419 aa10.9□□□□□ -0.66
SMAD4-210ENST00000590061 NEO1Q92859 1461 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms