RNA–Protein interactions for RNA: ENST00000589871.1

RBM42-205, Transcript of RNA binding motif protein 42, humanhuman

TSL 5 BASIC

Gene RBM42, Length 1,487 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-205ENST00000589871 LMTK3Q96Q04 1460 aa36.96■■■■□ 3.51
RBM42-205ENST00000589871 SETD1BQ9UPS6 1966 aaKnown RBP36.95■■■■□ 3.51
RBM42-205ENST00000589871 RNF17Q9BXT8 1623 aaKnown RBP36.93■■■■□ 3.5
RBM42-205ENST00000589871 NCOA1Q15788 1441 aa36.92■■■■□ 3.5
RBM42-205ENST00000589871 FAM135AQ9P2D6 1515 aa36.92■■■■□ 3.5
RBM42-205ENST00000589871 PREX1Q8TCU6 1659 aa36.92■■■■□ 3.5
RBM42-205ENST00000589871 ERBINQ96RT1 1412 aa36.91■■■■□ 3.5
RBM42-205ENST00000589871 ADGRL2O95490 1459 aa36.9■■■■□ 3.5
RBM42-205ENST00000589871 KDM5DQ9BY66 1539 aa36.9■■■■□ 3.5
RBM42-205ENST00000589871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.89■■■■□ 3.5
RBM42-205ENST00000589871 WASHC2CQ9Y4E1 1318 aa36.87■■■■□ 3.49
RBM42-205ENST00000589871 NPATQ14207 1427 aa36.85■■■■□ 3.49
RBM42-205ENST00000589871 UHRF1BP1Q6BDS2 1440 aa36.82■■■■□ 3.49
RBM42-205ENST00000589871 PTPRKQ15262 1439 aa36.81■■■■□ 3.48
RBM42-205ENST00000589871 MROH1Q8NDA8 1641 aa36.81■■■■□ 3.48
RBM42-205ENST00000589871 RRBP1Q9P2E9 1410 aaKnown RBP36.81■■■■□ 3.48
RBM42-205ENST00000589871 ZC3H13Q5T200 1668 aaKnown RBP36.79■■■■□ 3.48
RBM42-205ENST00000589871 HSPA2P54652 639 aa36.76■■■■□ 3.48
RBM42-205ENST00000589871 ITGAEP38570 1179 aa36.75■■■■□ 3.47
RBM42-205ENST00000589871 ABCC3O15438 1527 aa36.75■■■■□ 3.47
RBM42-205ENST00000589871 PRDM15P57071 1507 aaPredicted RBP36.74■■■■□ 3.47
RBM42-205ENST00000589871 ROCK1Q13464 1354 aa36.73■■■■□ 3.47
RBM42-205ENST00000589871 DEPDC5O75140 1603 aa36.73■■■■□ 3.47
RBM42-205ENST00000589871 PZPP20742 1482 aa36.72■■■■□ 3.47
RBM42-205ENST00000589871 ANKRD50Q9ULJ7 1429 aa36.71■■■■□ 3.47
RBM42-205ENST00000589871 CEP152O94986 1710 aa36.7■■■■□ 3.47
RBM42-205ENST00000589871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.68■■■■□ 3.46
RBM42-205ENST00000589871 KANK1Q14678 1352 aa36.66■■■■□ 3.46
RBM42-205ENST00000589871 MYO3AQ8NEV4 1616 aa36.64■■■■□ 3.46
RBM42-205ENST00000589871 FBXO31Q5XUX0 539 aaPredicted RBP36.64■■■■□ 3.46
RBM42-205ENST00000589871 CAMSAP1Q5T5Y3 1602 aa36.64■■■■□ 3.46
RBM42-205ENST00000589871 TNRQ92752 1358 aa36.59■■■■□ 3.45
RBM42-205ENST00000589871 ZNF142P52746 1687 aaPredicted RBP36.58■■■■□ 3.45
RBM42-205ENST00000589871 VWDEQ8N2E2 1590 aa36.57■■■■□ 3.44
RBM42-205ENST00000589871 CEP170BQ9Y4F5 1589 aaPredicted RBP36.56■■■■□ 3.44
RBM42-205ENST00000589871 CFAP65Q6ZU64 1925 aaKnown RBP36.53■■■■□ 3.44
RBM42-205ENST00000589871 ARHGAP31Q2M1Z3 1444 aa36.53■■■■□ 3.44
RBM42-205ENST00000589871 LMTK2Q8IWU2 1503 aa36.53■■■■□ 3.44
RBM42-205ENST00000589871 SPATA31D1Q6ZQQ2 1576 aa36.51■■■■□ 3.44
RBM42-205ENST00000589871 A2ML1A8K2U0 1454 aa36.5■■■■□ 3.43
RBM42-205ENST00000589871 ERVK-7P63135 1459 aa36.5■■■■□ 3.43
RBM42-205ENST00000589871 UNC13BO14795 1591 aa36.49■■■■□ 3.43
RBM42-205ENST00000589871 STRCQ7RTU9 1775 aa36.48■■■■□ 3.43
RBM42-205ENST00000589871 NLRP1Q9C000 1473 aa36.46■■■■□ 3.43
RBM42-205ENST00000589871 EFCAB6Q5THR3 1501 aa36.42■■■■□ 3.42
RBM42-205ENST00000589871 DMRT2Q9Y5R5 561 aa36.4■■■■□ 3.42
RBM42-205ENST00000589871 NAIPQ13075 1403 aa36.38■■■■□ 3.41
RBM42-205ENST00000589871 PLA2R1Q13018 1463 aa36.38■■■■□ 3.41
RBM42-205ENST00000589871 GCC2Q8IWJ2 1684 aa36.38■■■■□ 3.41
RBM42-205ENST00000589871 TET3O43151 1660 aa36.37■■■■□ 3.41
RBM42-205ENST00000589871 UGGT1Q9NYU2 1555 aa36.36■■■■□ 3.41
RBM42-205ENST00000589871 IQGAP3Q86VI3 1631 aa36.35■■■■□ 3.41
RBM42-205ENST00000589871 HFM1A2PYH4 1435 aa36.34■■■■□ 3.41
RBM42-205ENST00000589871 NUP155O75694 1391 aa36.33■■■■□ 3.41
RBM42-205ENST00000589871 RPRD2Q5VT52 1461 aaKnown RBP36.33■■■■□ 3.41
RBM42-205ENST00000589871 THEMISQ8N1K5 641 aaPredicted RBP36.31■■■■□ 3.4
RBM42-205ENST00000589871 PKD2Q13563 968 aa36.29■■■■□ 3.4
RBM42-205ENST00000589871 PTPRTO14522 1441 aa36.28■■■■□ 3.4
RBM42-205ENST00000589871 NCKAP5LQ9HCH0 1330 aa36.27■■■■□ 3.4
RBM42-205ENST00000589871 NOS1P29475 1434 aa36.27■■■■□ 3.4
RBM42-205ENST00000589871 SYNMO15061 1565 aa36.23■■■■□ 3.39
RBM42-205ENST00000589871 UBR1Q8IWV7 1749 aa36.23■■■■□ 3.39
RBM42-205ENST00000589871 E9PCH4 1651 aa36.23■■■■□ 3.39
RBM42-205ENST00000589871 POLR1AO95602 1720 aaPredicted RBP36.21■■■■□ 3.39
RBM42-205ENST00000589871 PIK3C2BO00750 1634 aa36.2■■■■□ 3.39
RBM42-205ENST00000589871 ANKLE2Q86XL3 938 aa36.18■■■■□ 3.38
RBM42-205ENST00000589871 IDI1Q13907 227 aa36.17■■■■□ 3.38
RBM42-205ENST00000589871 SLC52A1Q9NWF4 448 aa36.17■■■■□ 3.38
RBM42-205ENST00000589871 STAG3Q9UJ98 1225 aa36.14■■■■□ 3.38
RBM42-205ENST00000589871 KDM5AP29375 1690 aaKnown RBP36.14■■■■□ 3.38
RBM42-205ENST00000589871 NEURL4Q96JN8 1562 aa36.11■■■■□ 3.37
RBM42-205ENST00000589871 TRIM52Q96A61 297 aa36.11■■■■□ 3.37
RBM42-205ENST00000589871 SLIT1O75093 1534 aa36.06■■■■□ 3.36
RBM42-205ENST00000589871 ADGRB3O60242 1522 aa36.06■■■■□ 3.36
RBM42-205ENST00000589871 MED14O60244 1454 aa36.04■■■■□ 3.36
RBM42-205ENST00000589871 ARHGAP23Q9P227 1491 aa36.04■■■■□ 3.36
RBM42-205ENST00000589871 SPHKAPQ2M3C7 1700 aa36.02■■■■□ 3.36
RBM42-205ENST00000589871 TMEM2Q9UHN6 1383 aa36.01■■■■□ 3.36
RBM42-205ENST00000589871 NPHP4O75161 1426 aaPredicted RBP36.01■■■■□ 3.36
RBM42-205ENST00000589871 SCAF11Q99590 1463 aaKnown RBP36.01■■■■□ 3.35
RBM42-205ENST00000589871 EID1Q9Y6B2 187 aa35.99■■■■□ 3.35
RBM42-205ENST00000589871 TXNDC2Q86VQ3 553 aa35.99■■■■□ 3.35
RBM42-205ENST00000589871 IQGAP1P46940 1657 aa35.99■■■■□ 3.35
RBM42-205ENST00000589871 SETD5Q9C0A6 1442 aa35.98■■■■□ 3.35
RBM42-205ENST00000589871 LTKP29376 864 aa35.97■■■■□ 3.35
RBM42-205ENST00000589871 SLC4A1APQ9BWU0 796 aaKnown RBP35.97■■■■□ 3.35
RBM42-205ENST00000589871 CERKQ8TCT0 537 aa35.96■■■■□ 3.35
RBM42-205ENST00000589871 MYO5BQ9ULV0 1848 aa35.96■■■■□ 3.35
RBM42-205ENST00000589871 TMEM131LA2VDJ0 1609 aa35.95■■■■□ 3.35
RBM42-205ENST00000589871 LTBP4Q8N2S1 1624 aa35.94■■■■□ 3.34
RBM42-205ENST00000589871 ZNF335Q9H4Z2 1342 aaPredicted RBP35.93■■■■□ 3.34
RBM42-205ENST00000589871 ACIN1Q9UKV3 1341 aaKnown RBP35.92■■■■□ 3.34
RBM42-205ENST00000589871 CHGAP10645 457 aaKnown RBP35.91■■■■□ 3.34
RBM42-205ENST00000589871 TRPM2O94759 1503 aa35.87■■■■□ 3.33
RBM42-205ENST00000589871 RAB3GAP2Q9H2M9 1393 aa35.85■■■■□ 3.33
RBM42-205ENST00000589871 HDGFP51858 240 aaKnown RBP35.83■■■■□ 3.33
RBM42-205ENST00000589871 ZFYVE9O95405 1425 aa35.82■■■■□ 3.33
RBM42-205ENST00000589871 MPHOSPH9Q99550 1183 aa35.82■■■■□ 3.32
RBM42-205ENST00000589871 RIMS2Q9UQ26 1411 aa35.82■■■■□ 3.32
RBM42-205ENST00000589871 ILDR1Q86SU0 546 aaPredicted RBP35.81■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms