RNA–Protein interactions for RNA: ENST00000589575.5

PTBP1-214, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-214ENST00000589575 DAPK1P53355 1430 aa20.2■□□□□ 0.82
PTBP1-214ENST00000589575 KDM5DQ9BY66 1539 aa20.2■□□□□ 0.82
PTBP1-214ENST00000589575 KIF15Q9NS87 1388 aa20.2■□□□□ 0.82
PTBP1-214ENST00000589575 TCOF1Q13428 1488 aaKnown RBP20.19■□□□□ 0.82
PTBP1-214ENST00000589575 SHANK2Q9UPX8 1470 aa20.18■□□□□ 0.82
PTBP1-214ENST00000589575 FBXO31Q5XUX0 539 aaPredicted RBP20.17■□□□□ 0.82
PTBP1-214ENST00000589575 DUOX2Q9NRD8 1548 aa20.17■□□□□ 0.82
PTBP1-214ENST00000589575 PPARGC1BQ86YN6 1023 aaKnown RBP20.16■□□□□ 0.82
PTBP1-214ENST00000589575 ANKRD30AQ9BXX3 1397 aa20.15■□□□□ 0.82
PTBP1-214ENST00000589575 FAM135AQ9P2D6 1515 aa20.15■□□□□ 0.82
PTBP1-214ENST00000589575 TNRQ92752 1358 aa20.14■□□□□ 0.81
PTBP1-214ENST00000589575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.14■□□□□ 0.812e-8■■□□□ 13.9
PTBP1-214ENST00000589575 PZPP20742 1482 aa20.13■□□□□ 0.81
PTBP1-214ENST00000589575 DNMT1P26358 1616 aaKnown RBP20.13■□□□□ 0.81
PTBP1-214ENST00000589575 NCOA1Q15788 1441 aa20.11■□□□□ 0.81
PTBP1-214ENST00000589575 ERBINQ96RT1 1412 aa20.11■□□□□ 0.81
PTBP1-214ENST00000589575 FBXO41Q8TF61 875 aa20.11■□□□□ 0.81
PTBP1-214ENST00000589575 CAMSAP1Q5T5Y3 1602 aa20.11■□□□□ 0.81
PTBP1-214ENST00000589575 MYO3AQ8NEV4 1616 aa20.1■□□□□ 0.81
PTBP1-214ENST00000589575 EIF2AK4Q9P2K8 1649 aaKnown RBP20.1■□□□□ 0.81
PTBP1-214ENST00000589575 NCKAP5LQ9HCH0 1330 aa20.1■□□□□ 0.81
PTBP1-214ENST00000589575 CROCC2H7BZ55 1655 aa20.1■□□□□ 0.81
PTBP1-214ENST00000589575 RNF17Q9BXT8 1623 aaKnown RBP20.09■□□□□ 0.81
PTBP1-214ENST00000589575 CEP170BQ9Y4F5 1589 aaPredicted RBP20.09■□□□□ 0.81
PTBP1-214ENST00000589575 PTPRTO14522 1441 aa20.09■□□□□ 0.81
PTBP1-214ENST00000589575 ABCC3O15438 1527 aa20.08■□□□□ 0.81
PTBP1-214ENST00000589575 CERKQ8TCT0 537 aa20.08■□□□□ 0.81
PTBP1-214ENST00000589575 STRCQ7RTU9 1775 aa20.08■□□□□ 0.8
PTBP1-214ENST00000589575 A2ML1A8K2U0 1454 aa20.07■□□□□ 0.8
PTBP1-214ENST00000589575 KANK1Q14678 1352 aa20.07■□□□□ 0.8
PTBP1-214ENST00000589575 PKD2Q13563 968 aa20.06■□□□□ 0.8
PTBP1-214ENST00000589575 ITGAEP38570 1179 aa20.03■□□□□ 0.8
PTBP1-214ENST00000589575 PLA2R1Q13018 1463 aa20.03■□□□□ 0.8
PTBP1-214ENST00000589575 ZNF142P52746 1687 aaPredicted RBP20.03■□□□□ 0.8
PTBP1-214ENST00000589575 ZC3H13Q5T200 1668 aaKnown RBP20.03■□□□□ 0.8
PTBP1-214ENST00000589575 MROH1Q8NDA8 1641 aa20.02■□□□□ 0.8
PTBP1-214ENST00000589575 THEMISQ8N1K5 641 aaPredicted RBP20.02■□□□□ 0.8
PTBP1-214ENST00000589575 NLRP1Q9C000 1473 aa20.02■□□□□ 0.8
PTBP1-214ENST00000589575 ADGRL2O95490 1459 aa20.01■□□□□ 0.79
PTBP1-214ENST00000589575 PRDM15P57071 1507 aaPredicted RBP20■□□□□ 0.79
PTBP1-214ENST00000589575 ERVK-7P63135 1459 aa19.99■□□□□ 0.79
PTBP1-214ENST00000589575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.98■□□□□ 0.794e-7■■■□□ 16.1
PTBP1-214ENST00000589575 ANKLE2Q86XL3 938 aa19.98■□□□□ 0.79
PTBP1-214ENST00000589575 ANKRD50Q9ULJ7 1429 aa19.98■□□□□ 0.79
PTBP1-214ENST00000589575 UGGT1Q9NYU2 1555 aa19.97■□□□□ 0.79
PTBP1-214ENST00000589575 CEP152O94986 1710 aa19.96■□□□□ 0.79
PTBP1-214ENST00000589575 SPATA31D1Q6ZQQ2 1576 aa19.95■□□□□ 0.78
PTBP1-214ENST00000589575 ARHGAP31Q2M1Z3 1444 aa19.95■□□□□ 0.78
PTBP1-214ENST00000589575 ZNF335Q9H4Z2 1342 aaPredicted RBP19.94■□□□□ 0.78
PTBP1-214ENST00000589575 STAG3Q9UJ98 1225 aa19.93■□□□□ 0.78
PTBP1-214ENST00000589575 DEPDC5O75140 1603 aa19.92■□□□□ 0.78
PTBP1-214ENST00000589575 ROCK1Q13464 1354 aa19.92■□□□□ 0.78
PTBP1-214ENST00000589575 LMTK2Q8IWU2 1503 aa19.88■□□□□ 0.77
PTBP1-214ENST00000589575 LTBP4Q8N2S1 1624 aa19.87■□□□□ 0.77
PTBP1-214ENST00000589575 NPHP4O75161 1426 aaPredicted RBP19.86■□□□□ 0.77
PTBP1-214ENST00000589575 VWDEQ8N2E2 1590 aa19.86■□□□□ 0.77
PTBP1-214ENST00000589575 EID1Q9Y6B2 187 aa19.85■□□□□ 0.77
PTBP1-214ENST00000589575 IDI1Q13907 227 aa19.84■□□□□ 0.77
PTBP1-214ENST00000589575 TXNDC2Q86VQ3 553 aa19.84■□□□□ 0.77
PTBP1-214ENST00000589575 EFCAB6Q5THR3 1501 aa19.83■□□□□ 0.77
PTBP1-214ENST00000589575 CFAP65Q6ZU64 1925 aaKnown RBP19.83■□□□□ 0.77
PTBP1-214ENST00000589575 RRBP1Q9P2E9 1410 aaKnown RBP19.83■□□□□ 0.76
PTBP1-214ENST00000589575 NEURL4Q96JN8 1562 aa19.83■□□□□ 0.76
PTBP1-214ENST00000589575 POLR1AO95602 1720 aaPredicted RBP19.82■□□□□ 0.76
PTBP1-214ENST00000589575 SLC52A1Q9NWF4 448 aa19.81■□□□□ 0.76
PTBP1-214ENST00000589575 NUP155O75694 1391 aa19.81■□□□□ 0.76
PTBP1-214ENST00000589575 MED14O60244 1454 aa19.8■□□□□ 0.76
PTBP1-214ENST00000589575 RPRD2Q5VT52 1461 aaKnown RBP19.79■□□□□ 0.76
PTBP1-214ENST00000589575 SCAF11Q99590 1463 aaKnown RBP19.79■□□□□ 0.76
PTBP1-214ENST00000589575 NOS1P29475 1434 aa19.79■□□□□ 0.76
PTBP1-214ENST00000589575 LTKP29376 864 aa19.79■□□□□ 0.76
PTBP1-214ENST00000589575 IQSEC2Q5JU85 1478 aa19.79■□□□□ 0.76
PTBP1-214ENST00000589575 UBAP1LF5GYI3 381 aa19.78■□□□□ 0.76
PTBP1-214ENST00000589575 UBR1Q8IWV7 1749 aa19.77■□□□□ 0.76
PTBP1-214ENST00000589575 TMEM2Q9UHN6 1383 aa19.77■□□□□ 0.76
PTBP1-214ENST00000589575 UNC13BO14795 1591 aa19.77■□□□□ 0.76
PTBP1-214ENST00000589575 CHGAP10645 457 aaKnown RBP19.76■□□□□ 0.75
PTBP1-214ENST00000589575 PIK3C2BO00750 1634 aa19.76■□□□□ 0.75
PTBP1-214ENST00000589575 SYNMO15061 1565 aa19.75■□□□□ 0.75
PTBP1-214ENST00000589575 SLIT1O75093 1534 aa19.75■□□□□ 0.75
PTBP1-214ENST00000589575 ARHGAP23Q9P227 1491 aa19.74■□□□□ 0.75
PTBP1-214ENST00000589575 BCANQ96GW7 911 aa19.74■□□□□ 0.75
PTBP1-214ENST00000589575 TET3O43151 1660 aa19.74■□□□□ 0.75
PTBP1-214ENST00000589575 IQGAP1P46940 1657 aa19.74■□□□□ 0.75
PTBP1-214ENST00000589575 CPS1P31327 1500 aa19.73■□□□□ 0.75
PTBP1-214ENST00000589575 ADGRB3O60242 1522 aa19.71■□□□□ 0.75
PTBP1-214ENST00000589575 PPP1R15AO75807 674 aaPredicted RBP19.7■□□□□ 0.74
PTBP1-214ENST00000589575 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
PTBP1-214ENST00000589575 HDGFP51858 240 aaKnown RBP19.69■□□□□ 0.74
PTBP1-214ENST00000589575 TRIM52Q96A61 297 aa19.69■□□□□ 0.74
PTBP1-214ENST00000589575 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
PTBP1-214ENST00000589575 IQGAP3Q86VI3 1631 aa19.69■□□□□ 0.74
PTBP1-214ENST00000589575 NAIPQ13075 1403 aa19.68■□□□□ 0.74
PTBP1-214ENST00000589575 GCC2Q8IWJ2 1684 aa19.68■□□□□ 0.74
PTBP1-214ENST00000589575 TOM1O60784 492 aa19.67■□□□□ 0.74
PTBP1-214ENST00000589575 SLC26A8Q96RN1 970 aa19.67■□□□□ 0.74
PTBP1-214ENST00000589575 PIP4K2BP78356 416 aa19.66■□□□□ 0.74
PTBP1-214ENST00000589575 KDM5AP29375 1690 aaKnown RBP19.65■□□□□ 0.74
PTBP1-214ENST00000589575 E9PCH4 1651 aa19.64■□□□□ 0.73
PTBP1-214ENST00000589575 HFM1A2PYH4 1435 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms