RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 ZMYM3Q14202 1370 aa25.18■■□□□ 1.62
DNMT1-221ENST00000589538 ADGRL2O95490 1459 aa25.17■■□□□ 1.62
DNMT1-221ENST00000589538 RNF17Q9BXT8 1623 aaKnown RBP25.17■■□□□ 1.62
DNMT1-221ENST00000589538 ERBINQ96RT1 1412 aa25.17■■□□□ 1.62
DNMT1-221ENST00000589538 RRP7BPQ9NSQ0 103 aa25.16■■□□□ 1.62
DNMT1-221ENST00000589538 PREX1Q8TCU6 1659 aa25.16■■□□□ 1.62
DNMT1-221ENST00000589538 CHIC2Q9UKJ5 165 aa25.15■■□□□ 1.62
DNMT1-221ENST00000589538 KDM5DQ9BY66 1539 aa25.15■■□□□ 1.62
DNMT1-221ENST00000589538 LMTK3Q96Q04 1460 aa25.15■■□□□ 1.62
DNMT1-221ENST00000589538 NCOA1Q15788 1441 aa25.14■■□□□ 1.62
DNMT1-221ENST00000589538 NPATQ14207 1427 aa25.13■■□□□ 1.61
DNMT1-221ENST00000589538 WASHC2CQ9Y4E1 1318 aa25.12■■□□□ 1.61
DNMT1-221ENST00000589538 UHRF1BP1Q6BDS2 1440 aa25.11■■□□□ 1.61
DNMT1-221ENST00000589538 ZC3H13Q5T200 1668 aaKnown RBP25.1■■□□□ 1.61
DNMT1-221ENST00000589538 RRBP1Q9P2E9 1410 aaKnown RBP25.09■■□□□ 1.61
DNMT1-221ENST00000589538 ROCK1Q13464 1354 aa25.06■■□□□ 1.6
DNMT1-221ENST00000589538 PTPRKQ15262 1439 aa25.05■■□□□ 1.6
DNMT1-221ENST00000589538 MROH1Q8NDA8 1641 aa25.04■■□□□ 1.6
DNMT1-221ENST00000589538 PRDM15P57071 1507 aaPredicted RBP25.04■■□□□ 1.6
DNMT1-221ENST00000589538 DEPDC5O75140 1603 aa25.04■■□□□ 1.6
DNMT1-221ENST00000589538 PZPP20742 1482 aa25.03■■□□□ 1.6
DNMT1-221ENST00000589538 ABCC3O15438 1527 aa25.03■■□□□ 1.6
DNMT1-221ENST00000589538 KANK1Q14678 1352 aa25.01■■□□□ 1.59
DNMT1-221ENST00000589538 ANKRD50Q9ULJ7 1429 aa25.01■■□□□ 1.59
DNMT1-221ENST00000589538 ITGAEP38570 1179 aa24.98■■□□□ 1.59
DNMT1-221ENST00000589538 CEP152O94986 1710 aa24.98■■□□□ 1.59
DNMT1-221ENST00000589538 HSPA2P54652 639 aa24.97■■□□□ 1.59
DNMT1-221ENST00000589538 MYO3AQ8NEV4 1616 aa24.96■■□□□ 1.59
DNMT1-221ENST00000589538 CAMSAP1Q5T5Y3 1602 aa24.95■■□□□ 1.58
DNMT1-221ENST00000589538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.95■■□□□ 1.581e-6■■■□□ 16.1
DNMT1-221ENST00000589538 ZNF142P52746 1687 aaPredicted RBP24.94■■□□□ 1.58
DNMT1-221ENST00000589538 TNRQ92752 1358 aa24.93■■□□□ 1.58
DNMT1-221ENST00000589538 ARHGAP31Q2M1Z3 1444 aa24.92■■□□□ 1.58
DNMT1-221ENST00000589538 VWDEQ8N2E2 1590 aa24.92■■□□□ 1.58
DNMT1-221ENST00000589538 LMTK2Q8IWU2 1503 aa24.91■■□□□ 1.58
DNMT1-221ENST00000589538 CEP170BQ9Y4F5 1589 aaPredicted RBP24.9■■□□□ 1.58
DNMT1-221ENST00000589538 FBXO31Q5XUX0 539 aaPredicted RBP24.9■■□□□ 1.58
DNMT1-221ENST00000589538 SPATA31D1Q6ZQQ2 1576 aa24.88■■□□□ 1.57
DNMT1-221ENST00000589538 A2ML1A8K2U0 1454 aa24.88■■□□□ 1.57
DNMT1-221ENST00000589538 NLRP1Q9C000 1473 aa24.88■■□□□ 1.57
DNMT1-221ENST00000589538 ERVK-7P63135 1459 aa24.87■■□□□ 1.57
DNMT1-221ENST00000589538 UNC13BO14795 1591 aa24.86■■□□□ 1.57
DNMT1-221ENST00000589538 DMRT2Q9Y5R5 561 aa24.85■■□□□ 1.57
DNMT1-221ENST00000589538 STRCQ7RTU9 1775 aa24.82■■□□□ 1.56
DNMT1-221ENST00000589538 EFCAB6Q5THR3 1501 aa24.82■■□□□ 1.56
DNMT1-221ENST00000589538 CFAP65Q6ZU64 1925 aaKnown RBP24.82■■□□□ 1.56
DNMT1-221ENST00000589538 PLA2R1Q13018 1463 aa24.81■■□□□ 1.56
DNMT1-221ENST00000589538 GCC2Q8IWJ2 1684 aa24.8■■□□□ 1.56
DNMT1-221ENST00000589538 TET3O43151 1660 aa24.79■■□□□ 1.56
DNMT1-221ENST00000589538 RPRD2Q5VT52 1461 aaKnown RBP24.79■■□□□ 1.56
DNMT1-221ENST00000589538 IQGAP3Q86VI3 1631 aa24.77■■□□□ 1.56
DNMT1-221ENST00000589538 NAIPQ13075 1403 aa24.77■■□□□ 1.56
DNMT1-221ENST00000589538 UGGT1Q9NYU2 1555 aa24.76■■□□□ 1.55
DNMT1-221ENST00000589538 PKD2Q13563 968 aa24.76■■□□□ 1.55
DNMT1-221ENST00000589538 THEMISQ8N1K5 641 aaPredicted RBP24.76■■□□□ 1.55
DNMT1-221ENST00000589538 HFM1A2PYH4 1435 aa24.76■■□□□ 1.55
DNMT1-221ENST00000589538 PTPRTO14522 1441 aa24.75■■□□□ 1.55
DNMT1-221ENST00000589538 NUP155O75694 1391 aa24.74■■□□□ 1.55
DNMT1-221ENST00000589538 NOS1P29475 1434 aa24.71■■□□□ 1.55
DNMT1-221ENST00000589538 NCKAP5LQ9HCH0 1330 aa24.67■■□□□ 1.54
DNMT1-221ENST00000589538 UBR1Q8IWV7 1749 aa24.67■■□□□ 1.54
DNMT1-221ENST00000589538 KDM5AP29375 1690 aaKnown RBP24.67■■□□□ 1.54
DNMT1-221ENST00000589538 SLC52A1Q9NWF4 448 aa24.67■■□□□ 1.54
DNMT1-221ENST00000589538 POLR1AO95602 1720 aaPredicted RBP24.66■■□□□ 1.54
DNMT1-221ENST00000589538 E9PCH4 1651 aa24.66■■□□□ 1.54
DNMT1-221ENST00000589538 ANKLE2Q86XL3 938 aa24.66■■□□□ 1.54
DNMT1-221ENST00000589538 SYNMO15061 1565 aa24.66■■□□□ 1.54
DNMT1-221ENST00000589538 PIK3C2BO00750 1634 aa24.64■■□□□ 1.53
DNMT1-221ENST00000589538 STAG3Q9UJ98 1225 aa24.63■■□□□ 1.53
DNMT1-221ENST00000589538 ACIN1Q9UKV3 1341 aaKnown RBP24.62■■□□□ 1.53
DNMT1-221ENST00000589538 IDI1Q13907 227 aa24.62■■□□□ 1.53
DNMT1-221ENST00000589538 SLIT1O75093 1534 aa24.58■■□□□ 1.53
DNMT1-221ENST00000589538 TRIM52Q96A61 297 aa24.58■■□□□ 1.53
DNMT1-221ENST00000589538 MED14O60244 1454 aa24.58■■□□□ 1.52
DNMT1-221ENST00000589538 ADGRB3O60242 1522 aa24.57■■□□□ 1.52
DNMT1-221ENST00000589538 NEURL4Q96JN8 1562 aa24.57■■□□□ 1.52
DNMT1-221ENST00000589538 ARHGAP23Q9P227 1491 aa24.57■■□□□ 1.52
DNMT1-221ENST00000589538 EID1Q9Y6B2 187 aa24.55■■□□□ 1.52
DNMT1-221ENST00000589538 TMEM2Q9UHN6 1383 aa24.54■■□□□ 1.52
DNMT1-221ENST00000589538 NPHP4O75161 1426 aaPredicted RBP24.53■■□□□ 1.52
DNMT1-221ENST00000589538 SCAF11Q99590 1463 aaKnown RBP24.53■■□□□ 1.52
DNMT1-221ENST00000589538 SPHKAPQ2M3C7 1700 aa24.53■■□□□ 1.52
DNMT1-221ENST00000589538 SETD5Q9C0A6 1442 aa24.52■■□□□ 1.52
DNMT1-221ENST00000589538 IQGAP1P46940 1657 aa24.52■■□□□ 1.52
DNMT1-221ENST00000589538 TXNDC2Q86VQ3 553 aa24.5■■□□□ 1.51
DNMT1-221ENST00000589538 CERKQ8TCT0 537 aa24.49■■□□□ 1.51
DNMT1-221ENST00000589538 SLC4A1APQ9BWU0 796 aaKnown RBP24.49■■□□□ 1.51
DNMT1-221ENST00000589538 TMEM131LA2VDJ0 1609 aa24.48■■□□□ 1.51
DNMT1-221ENST00000589538 HDGFP51858 240 aaKnown RBP24.48■■□□□ 1.51
DNMT1-221ENST00000589538 LTKP29376 864 aa24.46■■□□□ 1.51
DNMT1-221ENST00000589538 LTBP4Q8N2S1 1624 aa24.46■■□□□ 1.51
DNMT1-221ENST00000589538 TRPM2O94759 1503 aa24.45■■□□□ 1.51
DNMT1-221ENST00000589538 MYO5BQ9ULV0 1848 aa24.45■■□□□ 1.5
DNMT1-221ENST00000589538 CHGAP10645 457 aaKnown RBP24.44■■□□□ 1.5
DNMT1-221ENST00000589538 ZNF335Q9H4Z2 1342 aaPredicted RBP24.43■■□□□ 1.5
DNMT1-221ENST00000589538 IQSEC2Q5JU85 1478 aa24.41■■□□□ 1.5
DNMT1-221ENST00000589538 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.41■■□□□ 1.5
DNMT1-221ENST00000589538 RAB3GAP2Q9H2M9 1393 aa24.41■■□□□ 1.5
DNMT1-221ENST00000589538 FBXO41Q8TF61 875 aa24.4■■□□□ 1.5
DNMT1-221ENST00000589538 RIMS2Q9UQ26 1411 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms