RNA–Protein interactions for RNA: ENST00000589073.1

PDE4A-206, Transcript of phosphodiesterase 4A, humanhuman

TSL 5

Gene PDE4A, Length 1,703 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-206ENST00000589073 ZEB1P37275 1124 aaPredicted RBP28.81■■■□□ 2.2
PDE4A-206ENST00000589073 SLC4A1APQ9BWU0 796 aaKnown RBP28.81■■■□□ 2.2
PDE4A-206ENST00000589073 EIF2AK4Q9P2K8 1649 aaKnown RBP28.81■■■□□ 2.2
PDE4A-206ENST00000589073 KIF3BO15066 747 aa28.8■■■□□ 2.2
PDE4A-206ENST00000589073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.79■■■□□ 2.2
PDE4A-206ENST00000589073 DEPDC5O75140 1603 aa28.75■■■□□ 2.19
PDE4A-206ENST00000589073 ATP10AO60312 1499 aa28.75■■■□□ 2.19
PDE4A-206ENST00000589073 FAM135AQ9P2D6 1515 aa28.74■■■□□ 2.19
PDE4A-206ENST00000589073 IQGAP3Q86VI3 1631 aa28.72■■■□□ 2.19
PDE4A-206ENST00000589073 FOXD1Q16676 465 aa28.72■■■□□ 2.19
PDE4A-206ENST00000589073 BCORL1Q5H9F3 1711 aa28.71■■■□□ 2.19
PDE4A-206ENST00000589073 PKD2Q13563 968 aa28.7■■■□□ 2.19
PDE4A-206ENST00000589073 MROH1Q8NDA8 1641 aa28.7■■■□□ 2.18
PDE4A-206ENST00000589073 ARHGEF40Q8TER5 1519 aa28.69■■■□□ 2.18
PDE4A-206ENST00000589073 RNF17Q9BXT8 1623 aaKnown RBP28.68■■■□□ 2.18
PDE4A-206ENST00000589073 REREQ9P2R6 1566 aa28.68■■■□□ 2.18
PDE4A-206ENST00000589073 SIN3AQ96ST3 1273 aa28.67■■■□□ 2.18
PDE4A-206ENST00000589073 PRDM15P57071 1507 aaPredicted RBP28.67■■■□□ 2.18
PDE4A-206ENST00000589073 VWDEQ8N2E2 1590 aa28.65■■■□□ 2.18
PDE4A-206ENST00000589073 KANK1Q14678 1352 aa28.65■■■□□ 2.18
PDE4A-206ENST00000589073 ANKRD30BQ9BXX2 1392 aa28.64■■■□□ 2.17
PDE4A-206ENST00000589073 GGT6Q6P531 493 aa28.63■■■□□ 2.17
PDE4A-206ENST00000589073 NEUROD1Q13562 356 aa28.6■■■□□ 2.17
PDE4A-206ENST00000589073 AGLP35573 1532 aa28.6■■■□□ 2.17
PDE4A-206ENST00000589073 SIGLEC1Q9BZZ2 1709 aa28.59■■■□□ 2.17
PDE4A-206ENST00000589073 TET3O43151 1660 aa28.55■■■□□ 2.16
PDE4A-206ENST00000589073 LMTK2Q8IWU2 1503 aa28.53■■■□□ 2.16
PDE4A-206ENST00000589073 CEP152O94986 1710 aa28.53■■■□□ 2.16
PDE4A-206ENST00000589073 E9PCH4 1651 aa28.51■■■□□ 2.16
PDE4A-206ENST00000589073 WASHC2CQ9Y4E1 1318 aa28.51■■■□□ 2.15
PDE4A-206ENST00000589073 ABCC3O15438 1527 aa28.49■■■□□ 2.15
PDE4A-206ENST00000589073 PLA2R1Q13018 1463 aa28.47■■■□□ 2.15
PDE4A-206ENST00000589073 EFCAB6Q5THR3 1501 aa28.46■■■□□ 2.15
PDE4A-206ENST00000589073 RPRD2Q5VT52 1461 aaKnown RBP28.45■■■□□ 2.15
PDE4A-206ENST00000589073 TIMELESSQ9UNS1 1208 aa28.45■■■□□ 2.14
PDE4A-206ENST00000589073 MLECQ14165 292 aa28.44■■■□□ 2.14
PDE4A-206ENST00000589073 PPP6R1Q9UPN7 881 aa28.44■■■□□ 2.14
PDE4A-206ENST00000589073 ARID4BQ4LE39 1312 aaPredicted RBP28.44■■■□□ 2.14
PDE4A-206ENST00000589073 ZC3H13Q5T200 1668 aaKnown RBP28.43■■■□□ 2.14
PDE4A-206ENST00000589073 CAMSAP1Q5T5Y3 1602 aa28.41■■■□□ 2.14
PDE4A-206ENST00000589073 TONSLQ96HA7 1378 aa28.4■■■□□ 2.14
PDE4A-206ENST00000589073 PTPRTO14522 1441 aa28.4■■■□□ 2.14
PDE4A-206ENST00000589073 NPATQ14207 1427 aa28.38■■■□□ 2.13
PDE4A-206ENST00000589073 SPHKAPQ2M3C7 1700 aa28.38■■■□□ 2.13
PDE4A-206ENST00000589073 CCDC144AA2RUR9 1427 aa28.36■■■□□ 2.13
PDE4A-206ENST00000589073 ARHGAP31Q2M1Z3 1444 aa28.35■■■□□ 2.13
PDE4A-206ENST00000589073 TRPM2O94759 1503 aa28.34■■■□□ 2.13
PDE4A-206ENST00000589073 CFAP65Q6ZU64 1925 aaKnown RBP28.34■■■□□ 2.13
PDE4A-206ENST00000589073 CLTCQ00610 1675 aaKnown RBP28.33■■■□□ 2.13
PDE4A-206ENST00000589073 L3MBTL2Q969R5 705 aa28.3■■■□□ 2.12
PDE4A-206ENST00000589073 PPP1R15AO75807 674 aaPredicted RBP28.29■■■□□ 2.12
PDE4A-206ENST00000589073 ESF1Q9H501 851 aaKnown RBP28.27■■■□□ 2.12
PDE4A-206ENST00000589073 CLTCL1P53675 1640 aa28.26■■■□□ 2.11
PDE4A-206ENST00000589073 NOS1P29475 1434 aa28.26■■■□□ 2.11
PDE4A-206ENST00000589073 CNTLNQ9NXG0 1405 aa28.25■■■□□ 2.11
PDE4A-206ENST00000589073 UGGT1Q9NYU2 1555 aa28.22■■■□□ 2.11
PDE4A-206ENST00000589073 ZMYM3Q14202 1370 aa28.21■■■□□ 2.11
PDE4A-206ENST00000589073 PREX1Q8TCU6 1659 aa28.21■■■□□ 2.11
PDE4A-206ENST00000589073 FBXO31Q5XUX0 539 aaPredicted RBP28.2■■■□□ 2.1
PDE4A-206ENST00000589073 SYNMO15061 1565 aa28.19■■■□□ 2.1
PDE4A-206ENST00000589073 SPATA31E1Q6ZUB1 1445 aa28.18■■■□□ 2.1
PDE4A-206ENST00000589073 RGL3Q3MIN7 710 aa28.18■■■□□ 2.1
PDE4A-206ENST00000589073 ERVK-7P63135 1459 aa28.16■■■□□ 2.1
PDE4A-206ENST00000589073 MROH2AA6NES4 1674 aa28.15■■■□□ 2.1
PDE4A-206ENST00000589073 FER1L4A9Z1Z3 1794 aa28.14■■■□□ 2.1
PDE4A-206ENST00000589073 PIK3C2BO00750 1634 aa28.13■■■□□ 2.09
PDE4A-206ENST00000589073 KIF1BO60333 1816 aa28.13■■■□□ 2.09
PDE4A-206ENST00000589073 SPATA31D1Q6ZQQ2 1576 aa28.12■■■□□ 2.09
PDE4A-206ENST00000589073 DCAF11Q8TEB1 546 aa28.11■■■□□ 2.09
PDE4A-206ENST00000589073 SLC52A1Q9NWF4 448 aa28.11■■■□□ 2.09
PDE4A-206ENST00000589073 NEURL4Q96JN8 1562 aa28.1■■■□□ 2.09
PDE4A-206ENST00000589073 IDI1Q13907 227 aa28.1■■■□□ 2.09
PDE4A-206ENST00000589073 NBPF8Q3BBV2 869 aa28.09■■■□□ 2.09
PDE4A-206ENST00000589073 KDM2AQ9Y2K7 1162 aa28.09■■■□□ 2.09
PDE4A-206ENST00000589073 ADAMTSL3P82987 1691 aa28.06■■■□□ 2.08
PDE4A-206ENST00000589073 CHGAP10645 457 aaKnown RBP28.06■■■□□ 2.08
PDE4A-206ENST00000589073 MADDQ8WXG6 1647 aa28.05■■■□□ 2.08
PDE4A-206ENST00000589073 CEBPAP49715 358 aaPredicted RBP28.05■■■□□ 2.08
PDE4A-206ENST00000589073 ADGRB3O60242 1522 aa28.05■■■□□ 2.08
PDE4A-206ENST00000589073 C3P01024 1663 aa28.04■■■□□ 2.08
PDE4A-206ENST00000589073 UHRF1BP1Q6BDS2 1440 aa28.03■■■□□ 2.08
PDE4A-206ENST00000589073 ZNF326Q5BKZ1 582 aaKnown RBP28.01■■■□□ 2.07
PDE4A-206ENST00000589073 RIMS1Q86UR5 1692 aaKnown RBP28■■■□□ 2.07
PDE4A-206ENST00000589073 TNRQ92752 1358 aa27.99■■■□□ 2.07
PDE4A-206ENST00000589073 TMEM131LA2VDJ0 1609 aa27.97■■■□□ 2.07
PDE4A-206ENST00000589073 PLPPR3Q6T4P5 718 aa27.96■■■□□ 2.07
PDE4A-206ENST00000589073 STAC3Q96MF2 364 aa27.96■■■□□ 2.07
PDE4A-206ENST00000589073 PRAG1Q86YV5 1406 aa27.96■■■□□ 2.07
PDE4A-206ENST00000589073 MYO5BQ9ULV0 1848 aa27.95■■■□□ 2.06
PDE4A-206ENST00000589073 IFT172Q9UG01 1749 aa27.94■■■□□ 2.06
PDE4A-206ENST00000589073 RPGRIP1LQ68CZ1 1315 aa27.93■■■□□ 2.06
PDE4A-206ENST00000589073 STAG3Q9UJ98 1225 aa27.9■■■□□ 2.06
PDE4A-206ENST00000589073 PPLO60437 1756 aa27.9■■■□□ 2.06
PDE4A-206ENST00000589073 MYOM2P54296 1465 aa27.89■■■□□ 2.06
PDE4A-206ENST00000589073 A2ML1A8K2U0 1454 aa27.88■■■□□ 2.05
PDE4A-206ENST00000589073 RALGAPBQ86X10 1494 aa27.88■■■□□ 2.05
PDE4A-206ENST00000589073 ADGRF5Q8IZF2 1346 aa27.87■■■□□ 2.05
PDE4A-206ENST00000589073 ZNF316A6NFI3 1004 aaPredicted RBP27.87■■■□□ 2.05
PDE4A-206ENST00000589073 NEXMIFQ5QGS0 1516 aa27.87■■■□□ 2.05
PDE4A-206ENST00000589073 TRPM1Q7Z4N2 1603 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms