RNA–Protein interactions for RNA: ENST00000589073.1

PDE4A-206, Transcript of phosphodiesterase 4A, humanhuman

TSL 5

Gene PDE4A, Length 1,703 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-206ENST00000589073 NISCHQ9Y2I1 1504 aa45.51■■■■■ 4.88
PDE4A-206ENST00000589073 CCDC180Q9P1Z9 1646 aa39.89■■■■□ 3.98
PDE4A-206ENST00000589073 ZCCHC6Q5VYS8 1495 aaKnown RBP38.13■■■■□ 3.69
PDE4A-206ENST00000589073 ABCC9O60706 1549 aa38.13■■■■□ 3.69
PDE4A-206ENST00000589073 DCAF8L2P0C7V8 631 aa37.73■■■■□ 3.63
PDE4A-206ENST00000589073 DCAF1Q9Y4B6 1507 aa37.63■■■■□ 3.62
PDE4A-206ENST00000589073 MYO15BQ96JP2 1530 aa37.37■■■■□ 3.57
PDE4A-206ENST00000589073 NACADO15069 1562 aa37.27■■■■□ 3.56
PDE4A-206ENST00000589073 RB1CC1Q8TDY2 1594 aa37.05■■■■□ 3.52
PDE4A-206ENST00000589073 SHROOM4Q9ULL8 1493 aa36.78■■■■□ 3.48
PDE4A-206ENST00000589073 SCRIBQ14160 1630 aa36.61■■■■□ 3.45
PDE4A-206ENST00000589073 UNC13AQ9UPW8 1703 aa36.3■■■■□ 3.4
PDE4A-206ENST00000589073 BICRAQ9NZM4 1560 aa35.95■■■■□ 3.35
PDE4A-206ENST00000589073 PABPN1Q86U42 306 aaKnown RBP eCLIP35.88■■■■□ 3.33
PDE4A-206ENST00000589073 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
PDE4A-206ENST00000589073 SUPT5HO00267 1087 aaKnown RBP35.17■■■■□ 3.22
PDE4A-206ENST00000589073 BAZ1AQ9NRL2 1556 aaPredicted RBP35.16■■■■□ 3.22
PDE4A-206ENST00000589073 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
PDE4A-206ENST00000589073 RSF1Q96T23 1441 aaPredicted RBP35.13■■■■□ 3.21
PDE4A-206ENST00000589073 SMARCA4P51532 1647 aa35.07■■■■□ 3.21
PDE4A-206ENST00000589073 EIF4G1Q04637 1599 aaKnown RBP34.9■■■■□ 3.18
PDE4A-206ENST00000589073 WIZO95785 1651 aa34.83■■■■□ 3.17
PDE4A-206ENST00000589073 PEG3Q9GZU2 1588 aa34.68■■■■□ 3.14
PDE4A-206ENST00000589073 ATAD2BQ9ULI0 1458 aa34.63■■■■□ 3.13
PDE4A-206ENST00000589073 SMARCA2P51531 1590 aa34.58■■■■□ 3.13
PDE4A-206ENST00000589073 CC2D2AQ9P2K1 1620 aa34.5■■■■□ 3.11
PDE4A-206ENST00000589073 TOP2AP11388 1531 aaKnown RBP34.45■■■■□ 3.11
PDE4A-206ENST00000589073 NCAPD3P42695 1498 aa34.41■■■■□ 3.1
PDE4A-206ENST00000589073 BAZ1BQ9UIG0 1483 aaKnown RBP34.39■■■■□ 3.1
PDE4A-206ENST00000589073 HMGXB3Q12766 1538 aa34.3■■■■□ 3.08
PDE4A-206ENST00000589073 CCDC88BA6NC98 1476 aa34.11■■■■□ 3.05
PDE4A-206ENST00000589073 DNAJC5BQ9UF47 199 aa34.09■■■■□ 3.05
PDE4A-206ENST00000589073 CFTRP13569 1480 aa33.52■■■□□ 2.96
PDE4A-206ENST00000589073 CADPSQ9ULU8 1353 aa33.49■■■□□ 2.95
PDE4A-206ENST00000589073 CHIC1Q5VXU3 224 aa33.45■■■□□ 2.95
PDE4A-206ENST00000589073 NESP48681 1621 aa33.33■■■□□ 2.93
PDE4A-206ENST00000589073 PRDM2Q13029 1718 aa33.3■■■□□ 2.92
PDE4A-206ENST00000589073 LAMC3Q9Y6N6 1575 aa33.3■■■□□ 2.92
PDE4A-206ENST00000589073 ABCC8Q09428 1581 aa33.22■■■□□ 2.91
PDE4A-206ENST00000589073 TRIM41Q8WV44 630 aa33.11■■■□□ 2.89
PDE4A-206ENST00000589073 FANCD2Q9BXW9 1451 aa33.11■■■□□ 2.89
PDE4A-206ENST00000589073 WRNQ14191 1432 aaPredicted RBP eCLIP33.07■■■□□ 2.88
PDE4A-206ENST00000589073 PDS5BQ9NTI5 1447 aa33.06■■■□□ 2.88
PDE4A-206ENST00000589073 SYNJ1O43426 1573 aa32.95■■■□□ 2.87
PDE4A-206ENST00000589073 CEP164Q9UPV0 1460 aa32.94■■■□□ 2.86
PDE4A-206ENST00000589073 KIF21AQ7Z4S6 1674 aa32.93■■■□□ 2.86
PDE4A-206ENST00000589073 CUX1P39880 1505 aa32.89■■■□□ 2.86
PDE4A-206ENST00000589073 TOP2BQ02880 1626 aa32.85■■■□□ 2.85
PDE4A-206ENST00000589073 BIVM-ERCC5R4GMW8 1640 aa32.83■■■□□ 2.85
PDE4A-206ENST00000589073 DNMBPQ6XZF7 1577 aa32.73■■■□□ 2.83
PDE4A-206ENST00000589073 URB2Q14146 1524 aaKnown RBP32.73■■■□□ 2.83
PDE4A-206ENST00000589073 ERCC6Q03468 1493 aa32.72■■■□□ 2.83
PDE4A-206ENST00000589073 TOPBP1Q92547 1522 aa32.71■■■□□ 2.83
PDE4A-206ENST00000589073 MRC2Q9UBG0 1479 aa32.65■■■□□ 2.82
PDE4A-206ENST00000589073 FGD5Q6ZNL6 1462 aa32.59■■■□□ 2.81
PDE4A-206ENST00000589073 SOGA1O94964 1423 aa32.52■■■□□ 2.8
PDE4A-206ENST00000589073 THOC2Q8NI27 1593 aaKnown RBP32.51■■■□□ 2.79
PDE4A-206ENST00000589073 POLA1P09884 1462 aaPredicted RBP32.51■■■□□ 2.79
PDE4A-206ENST00000589073 WDR62O43379 1518 aa32.5■■■□□ 2.79
PDE4A-206ENST00000589073 FAM9AQ8IZU1 332 aaPredicted RBP32.48■■■□□ 2.79
PDE4A-206ENST00000589073 RUSC2Q8N2Y8 1516 aa32.43■■■□□ 2.78
PDE4A-206ENST00000589073 RAD54L2Q9Y4B4 1467 aa32.41■■■□□ 2.78
PDE4A-206ENST00000589073 EEA1Q15075 1411 aa32.35■■■□□ 2.77
PDE4A-206ENST00000589073 CUX2O14529 1486 aa32.31■■■□□ 2.76
PDE4A-206ENST00000589073 ABCA10Q8WWZ4 1543 aa32.31■■■□□ 2.76
PDE4A-206ENST00000589073 KIF27Q86VH2 1401 aa32.28■■■□□ 2.76
PDE4A-206ENST00000589073 TARBP1Q13395 1621 aaKnown RBP32.26■■■□□ 2.75
PDE4A-206ENST00000589073 CSRNP3Q8WYN3 585 aa32.24■■■□□ 2.75
PDE4A-206ENST00000589073 WDR97A6NE52 1622 aa32.23■■■□□ 2.75
PDE4A-206ENST00000589073 IFT140Q96RY7 1462 aa32.19■■■□□ 2.74
PDE4A-206ENST00000589073 LOC105371045A0A1W2PR82 267 aa32.16■■■□□ 2.74
PDE4A-206ENST00000589073 TDRD9Q8NDG6 1382 aaKnown RBP32.13■■■□□ 2.73
PDE4A-206ENST00000589073 ABCA5Q8WWZ7 1642 aa32.07■■■□□ 2.72
PDE4A-206ENST00000589073 IGF1RP08069 1367 aa32.07■■■□□ 2.72
PDE4A-206ENST00000589073 ZNF608Q9ULD9 1512 aaPredicted RBP32.04■■■□□ 2.72
PDE4A-206ENST00000589073 GAPVD1Q14C86 1478 aa32.03■■■□□ 2.72
PDE4A-206ENST00000589073 EHMT2Q96KQ7 1210 aa32.03■■■□□ 2.72
PDE4A-206ENST00000589073 AQRO60306 1485 aaKnown RBP eCLIP32.01■■■□□ 2.714e-6■■□□□ 13.7
PDE4A-206ENST00000589073 KIF21BO75037 1637 aa31.95■■■□□ 2.71
PDE4A-206ENST00000589073 PRXQ9BXM0 1461 aa31.95■■■□□ 2.71
PDE4A-206ENST00000589073 ERICH3Q5RHP9 1530 aa31.92■■■□□ 2.7
PDE4A-206ENST00000589073 EIF4G3O43432 1585 aaKnown RBP31.9■■■□□ 2.7
PDE4A-206ENST00000589073 CARMIL1Q5VZK9 1371 aa31.89■■■□□ 2.7
PDE4A-206ENST00000589073 PBRM1Q86U86 1689 aa31.88■■■□□ 2.69
PDE4A-206ENST00000589073 GOLGA3Q08378 1498 aa31.88■■■□□ 2.69
PDE4A-206ENST00000589073 RAPGEF2Q9Y4G8 1499 aa31.87■■■□□ 2.69
PDE4A-206ENST00000589073 GRIN2BQ13224 1484 aa31.86■■■□□ 2.69
PDE4A-206ENST00000589073 CUL7Q14999 1698 aa31.82■■■□□ 2.68
PDE4A-206ENST00000589073 UBTFP17480 764 aaKnown RBP31.77■■■□□ 2.68
PDE4A-206ENST00000589073 TNIKQ9UKE5 1360 aa31.71■■■□□ 2.67
PDE4A-206ENST00000589073 SNAPC4Q5SXM2 1469 aa31.69■■■□□ 2.66
PDE4A-206ENST00000589073 FHAD1B1AJZ9 1412 aa31.68■■■□□ 2.66
PDE4A-206ENST00000589073 ADAMTS12P58397 1594 aa31.68■■■□□ 2.66
PDE4A-206ENST00000589073 MAGI1Q96QZ7 1491 aaPredicted RBP31.63■■■□□ 2.65
PDE4A-206ENST00000589073 SYNJ2O15056 1496 aa31.52■■■□□ 2.64
PDE4A-206ENST00000589073 CEP162Q5TB80 1403 aa31.49■■■□□ 2.63
PDE4A-206ENST00000589073 CHMP7Q8WUX9 453 aaPredicted RBP31.48■■■□□ 2.63
PDE4A-206ENST00000589073 GRIN2AQ12879 1464 aa31.46■■■□□ 2.63
PDE4A-206ENST00000589073 FBLN2P98095 1184 aa31.44■■■□□ 2.62
PDE4A-206ENST00000589073 CTTNBP2Q8WZ74 1663 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms