RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 ADAMTSL3P82987 1691 aa16.65■□□□□ 0.26
CDK3-204ENST00000588812 RNF17Q9BXT8 1623 aaKnown RBP16.65■□□□□ 0.26
CDK3-204ENST00000588812 GCC2Q8IWJ2 1684 aa16.65■□□□□ 0.26
CDK3-204ENST00000588812 KANK1Q14678 1352 aa16.63■□□□□ 0.25
CDK3-204ENST00000588812 SETD5Q9C0A6 1442 aa16.62■□□□□ 0.25
CDK3-204ENST00000588812 CNTLNQ9NXG0 1405 aa16.62■□□□□ 0.25
CDK3-204ENST00000588812 FAM135AQ9P2D6 1515 aa16.62■□□□□ 0.25
CDK3-204ENST00000588812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.254e-6■□□□□ 11.1
CDK3-204ENST00000588812 WASHC2CQ9Y4E1 1318 aa16.62■□□□□ 0.25
CDK3-204ENST00000588812 DEPDC5O75140 1603 aa16.61■□□□□ 0.25
CDK3-204ENST00000588812 ACIN1Q9UKV3 1341 aaKnown RBP16.61■□□□□ 0.25
CDK3-204ENST00000588812 PRDM15P57071 1507 aaPredicted RBP16.6■□□□□ 0.25
CDK3-204ENST00000588812 MROH1Q8NDA8 1641 aa16.6■□□□□ 0.25
CDK3-204ENST00000588812 MADDQ8WXG6 1647 aa16.6■□□□□ 0.25
CDK3-204ENST00000588812 FER1L4A9Z1Z3 1794 aa16.59■□□□□ 0.25
CDK3-204ENST00000588812 KDM5DQ9BY66 1539 aa16.59■□□□□ 0.25
CDK3-204ENST00000588812 PTPRMP28827 1452 aa16.58■□□□□ 0.24
CDK3-204ENST00000588812 UNC13BO14795 1591 aa16.58■□□□□ 0.24
CDK3-204ENST00000588812 NUP155O75694 1391 aa16.57■□□□□ 0.24
CDK3-204ENST00000588812 HRCP23327 699 aa16.56■□□□□ 0.24
CDK3-204ENST00000588812 ZC3H13Q5T200 1668 aaKnown RBP16.56■□□□□ 0.24
CDK3-204ENST00000588812 RIMS1Q86UR5 1692 aaKnown RBP16.56■□□□□ 0.24
CDK3-204ENST00000588812 VWDEQ8N2E2 1590 aa16.55■□□□□ 0.24
CDK3-204ENST00000588812 ABCC3O15438 1527 aa16.55■□□□□ 0.24
CDK3-204ENST00000588812 ZMYM3Q14202 1370 aa16.55■□□□□ 0.24
CDK3-204ENST00000588812 RAB3GAP2Q9H2M9 1393 aa16.55■□□□□ 0.24
CDK3-204ENST00000588812 TRIM52Q96A61 297 aa16.55■□□□□ 0.24
CDK3-204ENST00000588812 CLTCQ00610 1675 aaKnown RBP16.55■□□□□ 0.24
CDK3-204ENST00000588812 MROH2AA6NES4 1674 aa16.54■□□□□ 0.24
CDK3-204ENST00000588812 LMTK2Q8IWU2 1503 aa16.54■□□□□ 0.24
CDK3-204ENST00000588812 IQGAP3Q86VI3 1631 aa16.51■□□□□ 0.23
CDK3-204ENST00000588812 CEP152O94986 1710 aa16.5■□□□□ 0.23
CDK3-204ENST00000588812 CEBPAP49715 358 aaPredicted RBP16.5■□□□□ 0.23
CDK3-204ENST00000588812 ARHGAP31Q2M1Z3 1444 aa16.5■□□□□ 0.23
CDK3-204ENST00000588812 PCGF6Q9BYE7 350 aa16.49■□□□□ 0.23
CDK3-204ENST00000588812 CAMSAP1Q5T5Y3 1602 aa16.48■□□□□ 0.23
CDK3-204ENST00000588812 PZPP20742 1482 aa16.48■□□□□ 0.23
CDK3-204ENST00000588812 PLPPR3Q6T4P5 718 aa16.48■□□□□ 0.23
CDK3-204ENST00000588812 TET3O43151 1660 aa16.48■□□□□ 0.23
CDK3-204ENST00000588812 C3P01024 1663 aa16.48■□□□□ 0.23
CDK3-204ENST00000588812 EFCAB6Q5THR3 1501 aa16.47■□□□□ 0.23
CDK3-204ENST00000588812 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
CDK3-204ENST00000588812 NPATQ14207 1427 aa16.46■□□□□ 0.23
CDK3-204ENST00000588812 RPRD2Q5VT52 1461 aaKnown RBP16.46■□□□□ 0.23
CDK3-204ENST00000588812 FBXO31Q5XUX0 539 aaPredicted RBP16.45■□□□□ 0.22
CDK3-204ENST00000588812 MPHOSPH9Q99550 1183 aa16.44■□□□□ 0.22
CDK3-204ENST00000588812 PKD2Q13563 968 aa16.43■□□□□ 0.22
CDK3-204ENST00000588812 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
CDK3-204ENST00000588812 ERVK-7P63135 1459 aa16.42■□□□□ 0.22
CDK3-204ENST00000588812 SETD1BQ9UPS6 1966 aaKnown RBP16.41■□□□□ 0.22
CDK3-204ENST00000588812 E9PCH4 1651 aa16.4■□□□□ 0.22
CDK3-204ENST00000588812 TNRQ92752 1358 aa16.4■□□□□ 0.22
CDK3-204ENST00000588812 SPATA31D1Q6ZQQ2 1576 aa16.4■□□□□ 0.22
CDK3-204ENST00000588812 NOS1P29475 1434 aa16.39■□□□□ 0.21
CDK3-204ENST00000588812 PREX1Q8TCU6 1659 aa16.39■□□□□ 0.21
CDK3-204ENST00000588812 CFAP65Q6ZU64 1925 aaKnown RBP16.37■□□□□ 0.21
CDK3-204ENST00000588812 SLC52A1Q9NWF4 448 aa16.36■□□□□ 0.21
CDK3-204ENST00000588812 PTPRTO14522 1441 aa16.36■□□□□ 0.21
CDK3-204ENST00000588812 UHRF1BP1Q6BDS2 1440 aa16.36■□□□□ 0.21
CDK3-204ENST00000588812 NLRP1Q9C000 1473 aa16.35■□□□□ 0.21
CDK3-204ENST00000588812 FOXD1Q16676 465 aa16.34■□□□□ 0.21
CDK3-204ENST00000588812 SYNMO15061 1565 aa16.33■□□□□ 0.2
CDK3-204ENST00000588812 IDI1Q13907 227 aa16.32■□□□□ 0.2
CDK3-204ENST00000588812 SPHKAPQ2M3C7 1700 aa16.32■□□□□ 0.2
CDK3-204ENST00000588812 MYO3AQ8NEV4 1616 aa16.32■□□□□ 0.2
CDK3-204ENST00000588812 TRPM2O94759 1503 aa16.31■□□□□ 0.2
CDK3-204ENST00000588812 A2ML1A8K2U0 1454 aa16.31■□□□□ 0.2
CDK3-204ENST00000588812 PLA2R1Q13018 1463 aa16.31■□□□□ 0.2
CDK3-204ENST00000588812 CEP170BQ9Y4F5 1589 aaPredicted RBP16.3■□□□□ 0.2
CDK3-204ENST00000588812 STAG3Q9UJ98 1225 aa16.29■□□□□ 0.2
CDK3-204ENST00000588812 ZNF142P52746 1687 aaPredicted RBP16.28■□□□□ 0.2
CDK3-204ENST00000588812 PIK3C2BO00750 1634 aa16.28■□□□□ 0.2
CDK3-204ENST00000588812 THEMISQ8N1K5 641 aaPredicted RBP16.28■□□□□ 0.2
CDK3-204ENST00000588812 DHX57Q6P158 1386 aaKnown RBP16.27■□□□□ 0.2
CDK3-204ENST00000588812 ANKRD30BQ9BXX2 1392 aa16.27■□□□□ 0.2
CDK3-204ENST00000588812 UGGT1Q9NYU2 1555 aa16.27■□□□□ 0.2
CDK3-204ENST00000588812 CCDC144AA2RUR9 1427 aa16.27■□□□□ 0.19
CDK3-204ENST00000588812 HSPA2P54652 639 aa16.26■□□□□ 0.19
CDK3-204ENST00000588812 KDM5AP29375 1690 aaKnown RBP16.24■□□□□ 0.19
CDK3-204ENST00000588812 CLTCL1P53675 1640 aa16.24■□□□□ 0.19
CDK3-204ENST00000588812 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
CDK3-204ENST00000588812 ADGRB3O60242 1522 aa16.23■□□□□ 0.19
CDK3-204ENST00000588812 UBR1Q8IWV7 1749 aa16.22■□□□□ 0.19
CDK3-204ENST00000588812 TMEM131LA2VDJ0 1609 aa16.21■□□□□ 0.19
CDK3-204ENST00000588812 TMEM2Q9UHN6 1383 aa16.19■□□□□ 0.18
CDK3-204ENST00000588812 HDGFP51858 240 aaKnown RBP16.19■□□□□ 0.18
CDK3-204ENST00000588812 KIF1BO60333 1816 aa16.19■□□□□ 0.18
CDK3-204ENST00000588812 ZNF326Q5BKZ1 582 aaKnown RBP16.18■□□□□ 0.18
CDK3-204ENST00000588812 ANKLE2Q86XL3 938 aa16.18■□□□□ 0.18
CDK3-204ENST00000588812 EID1Q9Y6B2 187 aa16.18■□□□□ 0.18
CDK3-204ENST00000588812 SLIT1O75093 1534 aa16.18■□□□□ 0.18
CDK3-204ENST00000588812 ARHGAP23Q9P227 1491 aa16.17■□□□□ 0.18
CDK3-204ENST00000588812 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.16■□□□□ 0.18
CDK3-204ENST00000588812 SPATA31E1Q6ZUB1 1445 aa16.16■□□□□ 0.18
CDK3-204ENST00000588812 NEURL4Q96JN8 1562 aa16.16■□□□□ 0.18
CDK3-204ENST00000588812 RPGRIP1LQ68CZ1 1315 aa16.16■□□□□ 0.18
CDK3-204ENST00000588812 CLSPNQ9HAW4 1339 aa16.16■□□□□ 0.18
CDK3-204ENST00000588812 RGL3Q3MIN7 710 aa16.15■□□□□ 0.18
CDK3-204ENST00000588812 TXNDC2Q86VQ3 553 aa16.15■□□□□ 0.18
CDK3-204ENST00000588812 MYO5BQ9ULV0 1848 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms