RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 NAIPQ13075 1403 aa13.56□□□□□ -0.24
CIRBP-218ENST00000588344 HRCP23327 699 aa13.55□□□□□ -0.24
CIRBP-218ENST00000588344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.24
CIRBP-218ENST00000588344 FAM135AQ9P2D6 1515 aa13.53□□□□□ -0.24
CIRBP-218ENST00000588344 EIF2AK4Q9P2K8 1649 aaKnown RBP13.53□□□□□ -0.24
CIRBP-218ENST00000588344 BCORL1Q5H9F3 1711 aa13.51□□□□□ -0.25
CIRBP-218ENST00000588344 SETD5Q9C0A6 1442 aa13.51□□□□□ -0.25
CIRBP-218ENST00000588344 ZMYM3Q14202 1370 aa13.51□□□□□ -0.25
CIRBP-218ENST00000588344 NUP155O75694 1391 aa13.49□□□□□ -0.25
CIRBP-218ENST00000588344 ADAMTSL3P82987 1691 aa13.48□□□□□ -0.25
CIRBP-218ENST00000588344 TRIM52Q96A61 297 aa13.48□□□□□ -0.25
CIRBP-218ENST00000588344 KDM5DQ9BY66 1539 aa13.48□□□□□ -0.25
CIRBP-218ENST00000588344 SIGLEC1Q9BZZ2 1709 aa13.47□□□□□ -0.25
CIRBP-218ENST00000588344 RNF17Q9BXT8 1623 aaKnown RBP13.47□□□□□ -0.25
CIRBP-218ENST00000588344 PTPRMP28827 1452 aa13.47□□□□□ -0.25
CIRBP-218ENST00000588344 PRDM15P57071 1507 aaPredicted RBP13.45□□□□□ -0.26
CIRBP-218ENST00000588344 ARHGAP31Q2M1Z3 1444 aa13.45□□□□□ -0.26
CIRBP-218ENST00000588344 CEBPAP49715 358 aaPredicted RBP13.44□□□□□ -0.26
CIRBP-218ENST00000588344 RAB3GAP2Q9H2M9 1393 aa13.44□□□□□ -0.26
CIRBP-218ENST00000588344 LMTK2Q8IWU2 1503 aa13.44□□□□□ -0.26
CIRBP-218ENST00000588344 NPATQ14207 1427 aa13.43□□□□□ -0.26
CIRBP-218ENST00000588344 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
CIRBP-218ENST00000588344 ABCC3O15438 1527 aa13.43□□□□□ -0.26
CIRBP-218ENST00000588344 DEPDC5O75140 1603 aa13.42□□□□□ -0.26
CIRBP-218ENST00000588344 MADDQ8WXG6 1647 aa13.42□□□□□ -0.26
CIRBP-218ENST00000588344 VWDEQ8N2E2 1590 aa13.41□□□□□ -0.26
CIRBP-218ENST00000588344 MROH1Q8NDA8 1641 aa13.41□□□□□ -0.26
CIRBP-218ENST00000588344 PZPP20742 1482 aa13.41□□□□□ -0.26
CIRBP-218ENST00000588344 GCC2Q8IWJ2 1684 aa13.4□□□□□ -0.26
CIRBP-218ENST00000588344 PLPPR3Q6T4P5 718 aa13.4□□□□□ -0.26
CIRBP-218ENST00000588344 MPHOSPH9Q99550 1183 aa13.4□□□□□ -0.26
CIRBP-218ENST00000588344 RPRD2Q5VT52 1461 aaKnown RBP13.4□□□□□ -0.26
CIRBP-218ENST00000588344 UNC13BO14795 1591 aa13.4□□□□□ -0.26
CIRBP-218ENST00000588344 ZC3H13Q5T200 1668 aaKnown RBP13.4□□□□□ -0.26
CIRBP-218ENST00000588344 FBXO31Q5XUX0 539 aaPredicted RBP13.39□□□□□ -0.27
CIRBP-218ENST00000588344 MROH2AA6NES4 1674 aa13.39□□□□□ -0.27
CIRBP-218ENST00000588344 FER1L4A9Z1Z3 1794 aa13.39□□□□□ -0.27
CIRBP-218ENST00000588344 PKD2Q13563 968 aa13.38□□□□□ -0.27
CIRBP-218ENST00000588344 SLC52A1Q9NWF4 448 aa13.38□□□□□ -0.27
CIRBP-218ENST00000588344 RIMS1Q86UR5 1692 aaKnown RBP13.37□□□□□ -0.27
CIRBP-218ENST00000588344 PCGF6Q9BYE7 350 aa13.37□□□□□ -0.27
CIRBP-218ENST00000588344 TNRQ92752 1358 aa13.36□□□□□ -0.27
CIRBP-218ENST00000588344 CLTCQ00610 1675 aaKnown RBP13.36□□□□□ -0.27
CIRBP-218ENST00000588344 IQGAP3Q86VI3 1631 aa13.35□□□□□ -0.27
CIRBP-218ENST00000588344 UHRF1BP1Q6BDS2 1440 aa13.34□□□□□ -0.27
CIRBP-218ENST00000588344 EFCAB6Q5THR3 1501 aa13.34□□□□□ -0.27
CIRBP-218ENST00000588344 NOS1P29475 1434 aa13.33□□□□□ -0.28
CIRBP-218ENST00000588344 THEMISQ8N1K5 641 aaPredicted RBP13.33□□□□□ -0.28
CIRBP-218ENST00000588344 ERVK-7P63135 1459 aa13.33□□□□□ -0.28
CIRBP-218ENST00000588344 NLRP1Q9C000 1473 aa13.33□□□□□ -0.28
CIRBP-218ENST00000588344 CAMSAP1Q5T5Y3 1602 aa13.31□□□□□ -0.28
CIRBP-218ENST00000588344 PTPRTO14522 1441 aa13.31□□□□□ -0.28
CIRBP-218ENST00000588344 TET3O43151 1660 aa13.31□□□□□ -0.28
CIRBP-218ENST00000588344 C3P01024 1663 aa13.31□□□□□ -0.28
CIRBP-218ENST00000588344 IDI1Q13907 227 aa13.31□□□□□ -0.28
CIRBP-218ENST00000588344 STAG3Q9UJ98 1225 aa13.31□□□□□ -0.28
CIRBP-218ENST00000588344 SPATA31D1Q6ZQQ2 1576 aa13.31□□□□□ -0.28
CIRBP-218ENST00000588344 SETD1BQ9UPS6 1966 aaKnown RBP13.29□□□□□ -0.28
CIRBP-218ENST00000588344 HDGFP51858 240 aaKnown RBP13.29□□□□□ -0.28
CIRBP-218ENST00000588344 CEP152O94986 1710 aa13.28□□□□□ -0.28
CIRBP-218ENST00000588344 A2ML1A8K2U0 1454 aa13.28□□□□□ -0.28
CIRBP-218ENST00000588344 FOXD1Q16676 465 aa13.26□□□□□ -0.29
CIRBP-218ENST00000588344 LMTK3Q96Q04 1460 aa13.24□□□□□ -0.29
CIRBP-218ENST00000588344 ANKLE2Q86XL3 938 aa13.24□□□□□ -0.29
CIRBP-218ENST00000588344 DMRT2Q9Y5R5 561 aa13.24□□□□□ -0.29
CIRBP-218ENST00000588344 EID1Q9Y6B2 187 aa13.24□□□□□ -0.29
CIRBP-218ENST00000588344 PREX1Q8TCU6 1659 aa13.24□□□□□ -0.29
CIRBP-218ENST00000588344 CCDC144AA2RUR9 1427 aa13.23□□□□□ -0.29
CIRBP-218ENST00000588344 ANKRD30BQ9BXX2 1392 aa13.23□□□□□ -0.29
CIRBP-218ENST00000588344 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
CIRBP-218ENST00000588344 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.23□□□□□ -0.29
CIRBP-218ENST00000588344 E9PCH4 1651 aa13.23□□□□□ -0.29
CIRBP-218ENST00000588344 UGGT1Q9NYU2 1555 aa13.23□□□□□ -0.29
CIRBP-218ENST00000588344 PLA2R1Q13018 1463 aa13.23□□□□□ -0.29
CIRBP-218ENST00000588344 TRPM2O94759 1503 aa13.22□□□□□ -0.29
CIRBP-218ENST00000588344 RPGRIP1LQ68CZ1 1315 aa13.21□□□□□ -0.29
CIRBP-218ENST00000588344 HSPA2P54652 639 aa13.21□□□□□ -0.29
CIRBP-218ENST00000588344 SYNMO15061 1565 aa13.2□□□□□ -0.3
CIRBP-218ENST00000588344 CEP170BQ9Y4F5 1589 aaPredicted RBP13.2□□□□□ -0.3
CIRBP-218ENST00000588344 TXNDC2Q86VQ3 553 aa13.2□□□□□ -0.3
CIRBP-218ENST00000588344 STAC3Q96MF2 364 aa13.2□□□□□ -0.3
CIRBP-218ENST00000588344 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
CIRBP-218ENST00000588344 TMEM2Q9UHN6 1383 aa13.2□□□□□ -0.3
CIRBP-218ENST00000588344 ZNF326Q5BKZ1 582 aaKnown RBP13.19□□□□□ -0.3
CIRBP-218ENST00000588344 MYO3AQ8NEV4 1616 aa13.19□□□□□ -0.3
CIRBP-218ENST00000588344 CLSPNQ9HAW4 1339 aa13.18□□□□□ -0.3
CIRBP-218ENST00000588344 VGFO15240 615 aaPredicted RBP13.18□□□□□ -0.3
CIRBP-218ENST00000588344 KDM5AP29375 1690 aaKnown RBP13.16□□□□□ -0.3
CIRBP-218ENST00000588344 ADGRB3O60242 1522 aa13.16□□□□□ -0.3
CIRBP-218ENST00000588344 PIK3C2BO00750 1634 aa13.16□□□□□ -0.3
CIRBP-218ENST00000588344 SPHKAPQ2M3C7 1700 aa13.16□□□□□ -0.3
CIRBP-218ENST00000588344 ZNF142P52746 1687 aaPredicted RBP13.15□□□□□ -0.3
CIRBP-218ENST00000588344 SLIT1O75093 1534 aa13.15□□□□□ -0.3
CIRBP-218ENST00000588344 PPP1R15AO75807 674 aaPredicted RBP13.15□□□□□ -0.3
CIRBP-218ENST00000588344 RGL3Q3MIN7 710 aa13.15□□□□□ -0.3
CIRBP-218ENST00000588344 ARHGAP23Q9P227 1491 aa13.15□□□□□ -0.3
CIRBP-218ENST00000588344 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
CIRBP-218ENST00000588344 LTKP29376 864 aa13.14□□□□□ -0.31
CIRBP-218ENST00000588344 NEURL4Q96JN8 1562 aa13.13□□□□□ -0.31
CIRBP-218ENST00000588344 CCER1Q8TC90 406 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms