RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 ARHGEF12Q9NZN5 1544 aa22.99■■□□□ 1.27
PRKCSH-205ENST00000587327 PLCH2O75038 1416 aa22.98■■□□□ 1.27
PRKCSH-205ENST00000587327 FAM135AQ9P2D6 1515 aa22.98■■□□□ 1.27
PRKCSH-205ENST00000587327 UHRF1BP1Q6BDS2 1440 aa22.97■■□□□ 1.27
PRKCSH-205ENST00000587327 UNC13BO14795 1591 aa22.97■■□□□ 1.27
PRKCSH-205ENST00000587327 KDM5CP41229 1560 aa22.97■■□□□ 1.27
PRKCSH-205ENST00000587327 MSH5O43196 834 aa22.96■■□□□ 1.27
PRKCSH-205ENST00000587327 ABCC1P33527 1531 aa22.95■■□□□ 1.26
PRKCSH-205ENST00000587327 SMG6Q86US8 1419 aaKnown RBP22.93■■□□□ 1.26
PRKCSH-205ENST00000587327 RALGAPBQ86X10 1494 aa22.92■■□□□ 1.26
PRKCSH-205ENST00000587327 POLR3GLQ9BT43 218 aa22.92■■□□□ 1.26
PRKCSH-205ENST00000587327 ROCK2O75116 1388 aaKnown RBP22.91■■□□□ 1.26
PRKCSH-205ENST00000587327 B4GALNT3Q6L9W6 998 aa22.91■■□□□ 1.26
PRKCSH-205ENST00000587327 ARAP3Q8WWN8 1544 aa22.88■■□□□ 1.25
PRKCSH-205ENST00000587327 DUOX2Q9NRD8 1548 aa22.88■■□□□ 1.25
PRKCSH-205ENST00000587327 CARD11Q9BXL7 1154 aa22.88■■□□□ 1.25
PRKCSH-205ENST00000587327 IQGAP3Q86VI3 1631 aa22.87■■□□□ 1.25
PRKCSH-205ENST00000587327 CNGB1Q14028 1251 aaPredicted RBP22.87■■□□□ 1.25
PRKCSH-205ENST00000587327 EFCAB2Q5VUJ9 269 aa22.87■■□□□ 1.25
PRKCSH-205ENST00000587327 WDR7Q9Y4E6 1490 aa22.86■■□□□ 1.25
PRKCSH-205ENST00000587327 MAGI2Q86UL8 1455 aa22.86■■□□□ 1.25
PRKCSH-205ENST00000587327 TRAPPC8Q9Y2L5 1435 aa22.85■■□□□ 1.25
PRKCSH-205ENST00000587327 PNISRQ8TF01 805 aaKnown RBP22.85■■□□□ 1.25
PRKCSH-205ENST00000587327 NUDCQ9Y266 331 aa22.85■■□□□ 1.25
PRKCSH-205ENST00000587327 ERBINQ96RT1 1412 aa22.84■■□□□ 1.25
PRKCSH-205ENST00000587327 RNF123Q5XPI4 1314 aa22.83■■□□□ 1.25
PRKCSH-205ENST00000587327 TMC1Q8TDI8 760 aa22.81■■□□□ 1.24
PRKCSH-205ENST00000587327 ST20-MTHFSA0A0A6YYL1 179 aa22.8■■□□□ 1.24
PRKCSH-205ENST00000587327 KDM2AQ9Y2K7 1162 aa22.8■■□□□ 1.24
PRKCSH-205ENST00000587327 PLA2R1Q13018 1463 aa22.8■■□□□ 1.24
PRKCSH-205ENST00000587327 ABCA9Q8IUA7 1624 aa22.8■■□□□ 1.24
PRKCSH-205ENST00000587327 DCAF11Q8TEB1 546 aa22.8■■□□□ 1.24
PRKCSH-205ENST00000587327 ZFYVE16Q7Z3T8 1539 aa22.79■■□□□ 1.24
PRKCSH-205ENST00000587327 CCDC144AA2RUR9 1427 aa22.77■■□□□ 1.24
PRKCSH-205ENST00000587327 KTN1Q86UP2 1357 aaKnown RBP22.77■■□□□ 1.24
PRKCSH-205ENST00000587327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.76■■□□□ 1.237e-8■■□□□ 11.8
PRKCSH-205ENST00000587327 LRPPRCP42704 1394 aaKnown RBP22.74■■□□□ 1.23
PRKCSH-205ENST00000587327 RALBP1Q15311 655 aa22.74■■□□□ 1.23
PRKCSH-205ENST00000587327 BRD4O60885 1362 aaPredicted RBP22.74■■□□□ 1.23
PRKCSH-205ENST00000587327 RTEL1-TNFRSF6BF6WH68 1400 aa22.74■■□□□ 1.23
PRKCSH-205ENST00000587327 MYBBP1AQ9BQG0 1328 aaKnown RBP22.73■■□□□ 1.23
PRKCSH-205ENST00000587327 FANCAO15360 1455 aa22.73■■□□□ 1.23
PRKCSH-205ENST00000587327 ERICH6Q7L0X2 663 aa22.72■■□□□ 1.23
PRKCSH-205ENST00000587327 ASXL2Q76L83 1435 aa22.72■■□□□ 1.23
PRKCSH-205ENST00000587327 INO80Q9ULG1 1556 aaPredicted RBP22.71■■□□□ 1.23
PRKCSH-205ENST00000587327 ATP10AO60312 1499 aa22.71■■□□□ 1.23
PRKCSH-205ENST00000587327 SPAG9O60271 1321 aaKnown RBP22.71■■□□□ 1.23
PRKCSH-205ENST00000587327 AFAP1Q8N556 730 aa22.7■■□□□ 1.22
PRKCSH-205ENST00000587327 TRPM1Q7Z4N2 1603 aa22.69■■□□□ 1.22
PRKCSH-205ENST00000587327 A2MP01023 1474 aa22.69■■□□□ 1.22
PRKCSH-205ENST00000587327 E9PCH4 1651 aa22.69■■□□□ 1.22
PRKCSH-205ENST00000587327 PRAG1Q86YV5 1406 aa22.68■■□□□ 1.22
PRKCSH-205ENST00000587327 CCDC136Q96JN2 1154 aa22.68■■□□□ 1.22
PRKCSH-205ENST00000587327 ATP7AQ04656 1500 aa22.68■■□□□ 1.22
PRKCSH-205ENST00000587327 DEPDC5O75140 1603 aa22.67■■□□□ 1.22
PRKCSH-205ENST00000587327 SENP3-EIF4A1A0A087X0R7 540 aa22.66■■□□□ 1.22
PRKCSH-205ENST00000587327 ADGRL1O94910 1474 aa22.65■■□□□ 1.22
PRKCSH-205ENST00000587327 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
PRKCSH-205ENST00000587327 PARD3Q8TEW0 1356 aa22.61■■□□□ 1.21
PRKCSH-205ENST00000587327 SCAPERQ9BY12 1400 aa22.61■■□□□ 1.21
PRKCSH-205ENST00000587327 NLRP13Q86W25 1043 aa22.6■■□□□ 1.21
PRKCSH-205ENST00000587327 RGL3Q3MIN7 710 aa22.6■■□□□ 1.21
PRKCSH-205ENST00000587327 GPRASP1Q5JY77 1395 aa22.6■■□□□ 1.21
PRKCSH-205ENST00000587327 NBPF1Q3BBV0 1214 aa22.59■■□□□ 1.21
PRKCSH-205ENST00000587327 LAMC1P11047 1609 aa22.58■■□□□ 1.21
PRKCSH-205ENST00000587327 PER1O15534 1290 aaPredicted RBP22.58■■□□□ 1.21
PRKCSH-205ENST00000587327 VWDEQ8N2E2 1590 aa22.58■■□□□ 1.21
PRKCSH-205ENST00000587327 TRPM2O94759 1503 aa22.57■■□□□ 1.2
PRKCSH-205ENST00000587327 TET3O43151 1660 aa22.57■■□□□ 1.2
PRKCSH-205ENST00000587327 EIF2AK4Q9P2K8 1649 aaKnown RBP22.57■■□□□ 1.2
PRKCSH-205ENST00000587327 SPHKAPQ2M3C7 1700 aa22.56■■□□□ 1.2
PRKCSH-205ENST00000587327 MROH1Q8NDA8 1641 aa22.55■■□□□ 1.2
PRKCSH-205ENST00000587327 PRDM15P57071 1507 aaPredicted RBP22.54■■□□□ 1.2
PRKCSH-205ENST00000587327 WASHC2CQ9Y4E1 1318 aa22.54■■□□□ 1.2
PRKCSH-205ENST00000587327 KIDINS220Q9ULH0 1771 aa22.54■■□□□ 1.2
PRKCSH-205ENST00000587327 RRP1P56182 461 aaKnown RBP22.53■■□□□ 1.2
PRKCSH-205ENST00000587327 PDE3BQ13370 1112 aa22.53■■□□□ 1.2
PRKCSH-205ENST00000587327 TESK2Q96S53 571 aa22.53■■□□□ 1.2
PRKCSH-205ENST00000587327 PTPRTO14522 1441 aa22.53■■□□□ 1.2
PRKCSH-205ENST00000587327 COL17A1Q9UMD9 1497 aaPredicted RBP22.52■■□□□ 1.2
PRKCSH-205ENST00000587327 CEP152O94986 1710 aa22.52■■□□□ 1.2
PRKCSH-205ENST00000587327 RNF17Q9BXT8 1623 aaKnown RBP22.52■■□□□ 1.2
PRKCSH-205ENST00000587327 BCL11AQ9H165 835 aa22.52■■□□□ 1.2
PRKCSH-205ENST00000587327 RCAN3Q9UKA8 241 aa22.51■■□□□ 1.19
PRKCSH-205ENST00000587327 CLTCL1P53675 1640 aa22.51■■□□□ 1.19
PRKCSH-205ENST00000587327 NOP58Q9Y2X3 529 aaKnown RBP22.5■■□□□ 1.19
PRKCSH-205ENST00000587327 ZNF518AQ6AHZ1 1483 aa22.49■■□□□ 1.19
PRKCSH-205ENST00000587327 NPM1P06748 294 aaKnown RBP eCLIP22.49■■□□□ 1.19
PRKCSH-205ENST00000587327 CFAP74Q9C0B2 1584 aa22.49■■□□□ 1.19
PRKCSH-205ENST00000587327 DISP3Q9P2K9 1392 aa22.49■■□□□ 1.19
PRKCSH-205ENST00000587327 MADDQ8WXG6 1647 aa22.48■■□□□ 1.19
PRKCSH-205ENST00000587327 MYT1LQ9UL68 1186 aa22.48■■□□□ 1.19
PRKCSH-205ENST00000587327 SALL2Q9Y467 1007 aaPredicted RBP22.47■■□□□ 1.19
PRKCSH-205ENST00000587327 KANK1Q14678 1352 aa22.47■■□□□ 1.19
PRKCSH-205ENST00000587327 INSRP06213 1382 aa22.46■■□□□ 1.19
PRKCSH-205ENST00000587327 CD109Q6YHK3 1445 aa22.46■■□□□ 1.19
PRKCSH-205ENST00000587327 KIF3BO15066 747 aa22.46■■□□□ 1.19
PRKCSH-205ENST00000587327 EXOC6Q8TAG9 804 aa22.45■■□□□ 1.18
PRKCSH-205ENST00000587327 PANK3Q9H999 370 aa22.45■■□□□ 1.18
PRKCSH-205ENST00000587327 POGZQ7Z3K3 1410 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms