RNA–Protein interactions for RNA: ENST00000585850.1

ABCA8-206, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,502 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-206ENST00000585850 ABCC2Q92887 1545 aa12.83□□□□□ -0.35
ABCA8-206ENST00000585850 UNC13BO14795 1591 aa12.83□□□□□ -0.36
ABCA8-206ENST00000585850 TTC37Q6PGP7 1564 aa12.83□□□□□ -0.36
ABCA8-206ENST00000585850 NUP155O75694 1391 aa12.83□□□□□ -0.36
ABCA8-206ENST00000585850 KIF15Q9NS87 1388 aa12.83□□□□□ -0.36
ABCA8-206ENST00000585850 RALGAPBQ86X10 1494 aa12.83□□□□□ -0.36
ABCA8-206ENST00000585850 C11orf95C9JLR9 678 aaPredicted RBP12.83□□□□□ -0.36
ABCA8-206ENST00000585850 PLXNC1O60486 1568 aa12.82□□□□□ -0.36
ABCA8-206ENST00000585850 FKBP8Q14318 412 aa12.82□□□□□ -0.36
ABCA8-206ENST00000585850 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.81□□□□□ -0.36
ABCA8-206ENST00000585850 KIF7Q2M1P5 1343 aa12.81□□□□□ -0.36
ABCA8-206ENST00000585850 PLEKHH2Q8IVE3 1493 aa12.81□□□□□ -0.36
ABCA8-206ENST00000585850 PRKRIP1Q9H875 184 aaPredicted RBP12.8□□□□□ -0.36
ABCA8-206ENST00000585850 ARID4BQ4LE39 1312 aaPredicted RBP12.8□□□□□ -0.36
ABCA8-206ENST00000585850 ARHGAP5Q13017 1502 aa12.8□□□□□ -0.36
ABCA8-206ENST00000585850 SYCP2Q9BX26 1530 aa12.8□□□□□ -0.36
ABCA8-206ENST00000585850 HNRNPMP52272 730 aaKnown RBP eCLIP12.79□□□□□ -0.36
ABCA8-206ENST00000585850 FAM135AQ9P2D6 1515 aa12.79□□□□□ -0.36
ABCA8-206ENST00000585850 USP47Q96K76 1375 aa12.78□□□□□ -0.36
ABCA8-206ENST00000585850 HNRNPUQ00839 825 aaKnown RBP eCLIP12.78□□□□□ -0.36
ABCA8-206ENST00000585850 ZCCHC11Q5TAX3 1644 aaKnown RBP12.78□□□□□ -0.36
ABCA8-206ENST00000585850 IQGAP3Q86VI3 1631 aa12.78□□□□□ -0.36
ABCA8-206ENST00000585850 MYCNP04198 464 aaPredicted RBP12.78□□□□□ -0.36
ABCA8-206ENST00000585850 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.36
ABCA8-206ENST00000585850 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.37
ABCA8-206ENST00000585850 TRPM1Q7Z4N2 1603 aa12.76□□□□□ -0.37
ABCA8-206ENST00000585850 UHRF1BP1LA0JNW5 1464 aa12.76□□□□□ -0.37
ABCA8-206ENST00000585850 E9PCH4 1651 aa12.75□□□□□ -0.37
ABCA8-206ENST00000585850 ROCK2O75116 1388 aaKnown RBP12.75□□□□□ -0.37
ABCA8-206ENST00000585850 DUOX2Q9NRD8 1548 aa12.74□□□□□ -0.37
ABCA8-206ENST00000585850 TSHZ2Q9NRE2 1034 aa12.74□□□□□ -0.37
ABCA8-206ENST00000585850 LAMC1P11047 1609 aa12.74□□□□□ -0.37
ABCA8-206ENST00000585850 DHX29Q7Z478 1369 aaKnown RBP12.73□□□□□ -0.37
ABCA8-206ENST00000585850 BCANQ96GW7 911 aa12.72□□□□□ -0.37
ABCA8-206ENST00000585850 MAGI2Q86UL8 1455 aa12.72□□□□□ -0.37
ABCA8-206ENST00000585850 CCDC184Q52MB2 194 aa12.72□□□□□ -0.37
ABCA8-206ENST00000585850 MRS2Q9HD23 443 aa12.72□□□□□ -0.37
ABCA8-206ENST00000585850 ZNF326Q5BKZ1 582 aaKnown RBP12.71□□□□□ -0.38
ABCA8-206ENST00000585850 ABCC1P33527 1531 aa12.71□□□□□ -0.38
ABCA8-206ENST00000585850 PLCH2O75038 1416 aa12.7□□□□□ -0.38
ABCA8-206ENST00000585850 EIF2AK4Q9P2K8 1649 aaKnown RBP12.7□□□□□ -0.38
ABCA8-206ENST00000585850 MYT1Q01538 1121 aa12.7□□□□□ -0.38
ABCA8-206ENST00000585850 ZBED9Q6R2W3 1325 aa12.7□□□□□ -0.38
ABCA8-206ENST00000585850 CCDC144AA2RUR9 1427 aa12.69□□□□□ -0.38
ABCA8-206ENST00000585850 ERBINQ96RT1 1412 aa12.69□□□□□ -0.38
ABCA8-206ENST00000585850 ARAP3Q8WWN8 1544 aa12.69□□□□□ -0.38
ABCA8-206ENST00000585850 ERICH6BQ5W0A0 696 aa12.69□□□□□ -0.38
ABCA8-206ENST00000585850 CARD11Q9BXL7 1154 aa12.69□□□□□ -0.38
ABCA8-206ENST00000585850 ATP10AO60312 1499 aa12.68□□□□□ -0.38
ABCA8-206ENST00000585850 PRAG1Q86YV5 1406 aa12.67□□□□□ -0.38
ABCA8-206ENST00000585850 FAM9BQ8IZU0 186 aa12.67□□□□□ -0.38
ABCA8-206ENST00000585850 DCAF11Q8TEB1 546 aa12.67□□□□□ -0.38
ABCA8-206ENST00000585850 PLA2R1Q13018 1463 aa12.66□□□□□ -0.38
ABCA8-206ENST00000585850 KTN1Q86UP2 1357 aaKnown RBP12.65□□□□□ -0.38
ABCA8-206ENST00000585850 EFCAB2Q5VUJ9 269 aa12.65□□□□□ -0.38
ABCA8-206ENST00000585850 KDM2AQ9Y2K7 1162 aa12.65□□□□□ -0.38
ABCA8-206ENST00000585850 A2MP01023 1474 aa12.65□□□□□ -0.38
ABCA8-206ENST00000585850 PRDM15P57071 1507 aaPredicted RBP12.65□□□□□ -0.39
ABCA8-206ENST00000585850 GPRASP1Q5JY77 1395 aa12.64□□□□□ -0.39
ABCA8-206ENST00000585850 RNF17Q9BXT8 1623 aaKnown RBP12.64□□□□□ -0.39
ABCA8-206ENST00000585850 CEP152O94986 1710 aa12.64□□□□□ -0.39
ABCA8-206ENST00000585850 DEPDC5O75140 1603 aa12.63□□□□□ -0.39
ABCA8-206ENST00000585850 RTEL1-TNFRSF6BF6WH68 1400 aa12.63□□□□□ -0.39
ABCA8-206ENST00000585850 SPHKAPQ2M3C7 1700 aa12.63□□□□□ -0.39
ABCA8-206ENST00000585850 POLR3GLQ9BT43 218 aa12.62□□□□□ -0.39
ABCA8-206ENST00000585850 ST20-MTHFSA0A0A6YYL1 179 aa12.62□□□□□ -0.39
ABCA8-206ENST00000585850 ABCA9Q8IUA7 1624 aa12.61□□□□□ -0.39
ABCA8-206ENST00000585850 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
ABCA8-206ENST00000585850 ZFYVE16Q7Z3T8 1539 aa12.6□□□□□ -0.39
ABCA8-206ENST00000585850 TET3O43151 1660 aa12.6□□□□□ -0.39
ABCA8-206ENST00000585850 SMG6Q86US8 1419 aaKnown RBP12.6□□□□□ -0.39
ABCA8-206ENST00000585850 TRAPPC8Q9Y2L5 1435 aa12.6□□□□□ -0.39
ABCA8-206ENST00000585850 POLA2Q14181 598 aa12.59□□□□□ -0.39
ABCA8-206ENST00000585850 COL17A1Q9UMD9 1497 aaPredicted RBP12.59□□□□□ -0.39
ABCA8-206ENST00000585850 INO80Q9ULG1 1556 aaPredicted RBP12.59□□□□□ -0.39
ABCA8-206ENST00000585850 RALBP1Q15311 655 aa12.58□□□□□ -0.4
ABCA8-206ENST00000585850 BRD4O60885 1362 aaPredicted RBP12.58□□□□□ -0.4
ABCA8-206ENST00000585850 TRPM2O94759 1503 aa12.58□□□□□ -0.4
ABCA8-206ENST00000585850 IQGAP1P46940 1657 aa12.58□□□□□ -0.4
ABCA8-206ENST00000585850 PPP4R2Q9NY27 417 aa12.57□□□□□ -0.4
ABCA8-206ENST00000585850 MADDQ8WXG6 1647 aa12.57□□□□□ -0.4
ABCA8-206ENST00000585850 WDR7Q9Y4E6 1490 aa12.57□□□□□ -0.4
ABCA8-206ENST00000585850 MYBBP1AQ9BQG0 1328 aaKnown RBP12.57□□□□□ -0.4
ABCA8-206ENST00000585850 LRPPRCP42704 1394 aaKnown RBP12.56□□□□□ -0.4
ABCA8-206ENST00000585850 SPAG9O60271 1321 aaKnown RBP12.56□□□□□ -0.4
ABCA8-206ENST00000585850 PNISRQ8TF01 805 aaKnown RBP12.56□□□□□ -0.4
ABCA8-206ENST00000585850 FOXD4L1Q9NU39 408 aa12.56□□□□□ -0.4
ABCA8-206ENST00000585850 KIAA1210Q9ULL0 1709 aa12.56□□□□□ -0.4
ABCA8-206ENST00000585850 ATP7AQ04656 1500 aa12.55□□□□□ -0.4
ABCA8-206ENST00000585850 RGL3Q3MIN7 710 aa12.55□□□□□ -0.4
ABCA8-206ENST00000585850 TMC1Q8TDI8 760 aa12.55□□□□□ -0.4
ABCA8-206ENST00000585850 VWDEQ8N2E2 1590 aa12.55□□□□□ -0.4
ABCA8-206ENST00000585850 NEURL4Q96JN8 1562 aa12.55□□□□□ -0.4
ABCA8-206ENST00000585850 IRX6P78412 446 aaPredicted RBP12.54□□□□□ -0.4
ABCA8-206ENST00000585850 CLTCL1P53675 1640 aa12.54□□□□□ -0.4
ABCA8-206ENST00000585850 NUDCQ9Y266 331 aa12.53□□□□□ -0.4
ABCA8-206ENST00000585850 PTPRTO14522 1441 aa12.53□□□□□ -0.4
ABCA8-206ENST00000585850 PARD3Q8TEW0 1356 aa12.53□□□□□ -0.4
ABCA8-206ENST00000585850 WASHC2CQ9Y4E1 1318 aa12.53□□□□□ -0.4
ABCA8-206ENST00000585850 NBPF1Q3BBV0 1214 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms