RNA–Protein interactions for RNA: ENST00000584397.1

ARHGDIA-216, Transcript of Rho GDP dissociation inhibitor alpha, humanhuman

TSL 2

Gene ARHGDIA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGDIA-216ENST00000584397 RNF17Q9BXT8 1623 aaKnown RBP37.97■■■■□ 3.67
ARHGDIA-216ENST00000584397 FAM135AQ9P2D6 1515 aa37.97■■■■□ 3.67
ARHGDIA-216ENST00000584397 MROH2AA6NES4 1674 aa37.95■■■■□ 3.66
ARHGDIA-216ENST00000584397 ROCK1Q13464 1354 aa37.94■■■■□ 3.66
ARHGDIA-216ENST00000584397 CEBPAP49715 358 aaPredicted RBP37.94■■■■□ 3.66
ARHGDIA-216ENST00000584397 ZMYM3Q14202 1370 aa37.93■■■■□ 3.66
ARHGDIA-216ENST00000584397 C3P01024 1663 aa37.91■■■■□ 3.66
ARHGDIA-216ENST00000584397 CLTCQ00610 1675 aaKnown RBP37.88■■■■□ 3.66
ARHGDIA-216ENST00000584397 MROH1Q8NDA8 1641 aa37.88■■■■□ 3.65
ARHGDIA-216ENST00000584397 KDM5DQ9BY66 1539 aa37.87■■■■□ 3.65
ARHGDIA-216ENST00000584397 PLPPR3Q6T4P5 718 aa37.84■■■■□ 3.65
ARHGDIA-216ENST00000584397 WASHC2CQ9Y4E1 1318 aa37.83■■■■□ 3.65
ARHGDIA-216ENST00000584397 NPATQ14207 1427 aa37.81■■■■□ 3.64
ARHGDIA-216ENST00000584397 ANKRD50Q9ULJ7 1429 aa37.81■■■■□ 3.64
ARHGDIA-216ENST00000584397 PRDM15P57071 1507 aaPredicted RBP37.8■■■■□ 3.64
ARHGDIA-216ENST00000584397 DEPDC5O75140 1603 aa37.79■■■■□ 3.64
ARHGDIA-216ENST00000584397 LMTK3Q96Q04 1460 aa37.79■■■■□ 3.64
ARHGDIA-216ENST00000584397 SETD1BQ9UPS6 1966 aaKnown RBP37.79■■■■□ 3.64
ARHGDIA-216ENST00000584397 ITGAEP38570 1179 aa37.79■■■■□ 3.64
ARHGDIA-216ENST00000584397 ABCC3O15438 1527 aa37.78■■■■□ 3.64
ARHGDIA-216ENST00000584397 ZC3H13Q5T200 1668 aaKnown RBP37.73■■■■□ 3.63
ARHGDIA-216ENST00000584397 PZPP20742 1482 aa37.71■■■■□ 3.63
ARHGDIA-216ENST00000584397 VWDEQ8N2E2 1590 aa37.7■■■■□ 3.63
ARHGDIA-216ENST00000584397 PREX1Q8TCU6 1659 aa37.69■■■■□ 3.62
ARHGDIA-216ENST00000584397 UHRF1BP1Q6BDS2 1440 aa37.64■■■■□ 3.62
ARHGDIA-216ENST00000584397 LMTK2Q8IWU2 1503 aa37.64■■■■□ 3.62
ARHGDIA-216ENST00000584397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.63■■■■□ 3.618e-7■■■□□ 16.6
ARHGDIA-216ENST00000584397 KANK1Q14678 1352 aa37.63■■■■□ 3.61
ARHGDIA-216ENST00000584397 ARHGAP31Q2M1Z3 1444 aa37.62■■■■□ 3.61
ARHGDIA-216ENST00000584397 FBXO31Q5XUX0 539 aaPredicted RBP37.61■■■■□ 3.61
ARHGDIA-216ENST00000584397 CEP152O94986 1710 aa37.61■■■■□ 3.61
ARHGDIA-216ENST00000584397 NAIPQ13075 1403 aa37.59■■■■□ 3.61
ARHGDIA-216ENST00000584397 CAMSAP1Q5T5Y3 1602 aa37.58■■■■□ 3.61
ARHGDIA-216ENST00000584397 UNC13BO14795 1591 aa37.57■■■■□ 3.6
ARHGDIA-216ENST00000584397 HFM1A2PYH4 1435 aa37.55■■■■□ 3.6
ARHGDIA-216ENST00000584397 HSPA2P54652 639 aa37.53■■■■□ 3.6
ARHGDIA-216ENST00000584397 TNRQ92752 1358 aa37.53■■■■□ 3.6
ARHGDIA-216ENST00000584397 SPATA31D1Q6ZQQ2 1576 aa37.51■■■■□ 3.6
ARHGDIA-216ENST00000584397 ERVK-7P63135 1459 aa37.5■■■■□ 3.59
ARHGDIA-216ENST00000584397 MYO3AQ8NEV4 1616 aa37.49■■■■□ 3.59
ARHGDIA-216ENST00000584397 GCC2Q8IWJ2 1684 aa37.48■■■■□ 3.59
ARHGDIA-216ENST00000584397 ZNF142P52746 1687 aaPredicted RBP37.46■■■■□ 3.59
ARHGDIA-216ENST00000584397 EFCAB6Q5THR3 1501 aa37.46■■■■□ 3.59
ARHGDIA-216ENST00000584397 CEP170BQ9Y4F5 1589 aaPredicted RBP37.43■■■■□ 3.58
ARHGDIA-216ENST00000584397 A2ML1A8K2U0 1454 aa37.43■■■■□ 3.58
ARHGDIA-216ENST00000584397 NLRP1Q9C000 1473 aa37.42■■■■□ 3.58
ARHGDIA-216ENST00000584397 IQGAP3Q86VI3 1631 aa37.42■■■■□ 3.58
ARHGDIA-216ENST00000584397 NUP155O75694 1391 aa37.41■■■■□ 3.58
ARHGDIA-216ENST00000584397 TET3O43151 1660 aa37.4■■■■□ 3.58
ARHGDIA-216ENST00000584397 RPRD2Q5VT52 1461 aaKnown RBP37.39■■■■□ 3.58
ARHGDIA-216ENST00000584397 NOS1P29475 1434 aa37.36■■■■□ 3.57
ARHGDIA-216ENST00000584397 CFAP65Q6ZU64 1925 aaKnown RBP37.33■■■■□ 3.57
ARHGDIA-216ENST00000584397 PLA2R1Q13018 1463 aa37.29■■■■□ 3.56
ARHGDIA-216ENST00000584397 STRCQ7RTU9 1775 aa37.29■■■■□ 3.56
ARHGDIA-216ENST00000584397 SYNMO15061 1565 aa37.25■■■■□ 3.55
ARHGDIA-216ENST00000584397 E9PCH4 1651 aa37.25■■■■□ 3.55
ARHGDIA-216ENST00000584397 UGGT1Q9NYU2 1555 aa37.24■■■■□ 3.55
ARHGDIA-216ENST00000584397 THEMISQ8N1K5 641 aaPredicted RBP37.22■■■■□ 3.55
ARHGDIA-216ENST00000584397 SETD5Q9C0A6 1442 aa37.19■■■■□ 3.54
ARHGDIA-216ENST00000584397 IDI1Q13907 227 aa37.19■■■■□ 3.54
ARHGDIA-216ENST00000584397 SLC52A1Q9NWF4 448 aa37.19■■■■□ 3.54
ARHGDIA-216ENST00000584397 DMRT2Q9Y5R5 561 aa37.17■■■■□ 3.54
ARHGDIA-216ENST00000584397 PKD2Q13563 968 aa37.16■■■■□ 3.54
ARHGDIA-216ENST00000584397 PTPRTO14522 1441 aa37.15■■■■□ 3.54
ARHGDIA-216ENST00000584397 UBR1Q8IWV7 1749 aa37.14■■■■□ 3.54
ARHGDIA-216ENST00000584397 ACIN1Q9UKV3 1341 aaKnown RBP37.13■■■■□ 3.54
ARHGDIA-216ENST00000584397 TRIM52Q96A61 297 aa37.13■■■■□ 3.53
ARHGDIA-216ENST00000584397 KDM5AP29375 1690 aaKnown RBP37.12■■■■□ 3.53
ARHGDIA-216ENST00000584397 NCKAP5LQ9HCH0 1330 aa37.11■■■■□ 3.53
ARHGDIA-216ENST00000584397 PIK3C2BO00750 1634 aa37.11■■■■□ 3.53
ARHGDIA-216ENST00000584397 ARHGAP23Q9P227 1491 aa37.07■■■■□ 3.52
ARHGDIA-216ENST00000584397 RAB3GAP2Q9H2M9 1393 aa37.05■■■■□ 3.52
ARHGDIA-216ENST00000584397 ANKLE2Q86XL3 938 aa37.05■■■■□ 3.52
ARHGDIA-216ENST00000584397 SLIT1O75093 1534 aa37.05■■■■□ 3.52
ARHGDIA-216ENST00000584397 SLC4A1APQ9BWU0 796 aaKnown RBP37.04■■■■□ 3.52
ARHGDIA-216ENST00000584397 ADGRB3O60242 1522 aa37.02■■■■□ 3.52
ARHGDIA-216ENST00000584397 HRCP23327 699 aa37.02■■■■□ 3.52
ARHGDIA-216ENST00000584397 NEURL4Q96JN8 1562 aa37.01■■■■□ 3.52
ARHGDIA-216ENST00000584397 MED14O60244 1454 aa37.01■■■■□ 3.51
ARHGDIA-216ENST00000584397 TMEM2Q9UHN6 1383 aa37■■■■□ 3.51
ARHGDIA-216ENST00000584397 POLR1AO95602 1720 aaPredicted RBP36.98■■■■□ 3.51
ARHGDIA-216ENST00000584397 SPHKAPQ2M3C7 1700 aa36.98■■■■□ 3.51
ARHGDIA-216ENST00000584397 MPHOSPH9Q99550 1183 aa36.97■■■■□ 3.51
ARHGDIA-216ENST00000584397 STAG3Q9UJ98 1225 aa36.97■■■■□ 3.51
ARHGDIA-216ENST00000584397 TMEM131LA2VDJ0 1609 aa36.95■■■■□ 3.51
ARHGDIA-216ENST00000584397 TRPM2O94759 1503 aa36.95■■■■□ 3.5
ARHGDIA-216ENST00000584397 LTKP29376 864 aa36.93■■■■□ 3.5
ARHGDIA-216ENST00000584397 SCAF11Q99590 1463 aaKnown RBP36.92■■■■□ 3.5
ARHGDIA-216ENST00000584397 NPHP4O75161 1426 aaPredicted RBP36.89■■■■□ 3.5
ARHGDIA-216ENST00000584397 TXNDC2Q86VQ3 553 aa36.89■■■■□ 3.5
ARHGDIA-216ENST00000584397 ZFYVE9O95405 1425 aa36.86■■■■□ 3.49
ARHGDIA-216ENST00000584397 EID1Q9Y6B2 187 aa36.86■■■■□ 3.49
ARHGDIA-216ENST00000584397 FOXD1Q16676 465 aa36.83■■■■□ 3.49
ARHGDIA-216ENST00000584397 CLTCL1P53675 1640 aa36.83■■■■□ 3.49
ARHGDIA-216ENST00000584397 MYO5BQ9ULV0 1848 aa36.82■■■■□ 3.49
ARHGDIA-216ENST00000584397 IQGAP1P46940 1657 aa36.8■■■■□ 3.48
ARHGDIA-216ENST00000584397 RIMS2Q9UQ26 1411 aa36.78■■■■□ 3.48
ARHGDIA-216ENST00000584397 CHGAP10645 457 aaKnown RBP36.78■■■■□ 3.48
ARHGDIA-216ENST00000584397 LTBP4Q8N2S1 1624 aa36.77■■■■□ 3.48
ARHGDIA-216ENST00000584397 HDGFP51858 240 aaKnown RBP36.74■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms