RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 HSPA2P54652 639 aa38.24■■■■□ 3.71
TTC39C-209ENST00000584250 PPP6R1Q9UPN7 881 aa38.24■■■■□ 3.71
TTC39C-209ENST00000584250 RNF17Q9BXT8 1623 aaKnown RBP38.23■■■■□ 3.71
TTC39C-209ENST00000584250 EIF2AK4Q9P2K8 1649 aaKnown RBP38.23■■■■□ 3.71
TTC39C-209ENST00000584250 ANKRD30AQ9BXX3 1397 aa38.22■■■■□ 3.71
TTC39C-209ENST00000584250 MROH1Q8NDA8 1641 aa38.21■■■■□ 3.71
TTC39C-209ENST00000584250 ADGRL2O95490 1459 aa38.21■■■■□ 3.71
TTC39C-209ENST00000584250 PREX1Q8TCU6 1659 aa38.2■■■■□ 3.71
TTC39C-209ENST00000584250 KDM5DQ9BY66 1539 aa38.18■■■■□ 3.7
TTC39C-209ENST00000584250 SETD1BQ9UPS6 1966 aaKnown RBP38.18■■■■□ 3.7
TTC39C-209ENST00000584250 ERBINQ96RT1 1412 aa38.16■■■■□ 3.7
TTC39C-209ENST00000584250 WASHC2CQ9Y4E1 1318 aa38.15■■■■□ 3.7
TTC39C-209ENST00000584250 ITGAEP38570 1179 aa38.15■■■■□ 3.7
TTC39C-209ENST00000584250 RRBP1Q9P2E9 1410 aaKnown RBP38.12■■■■□ 3.69
TTC39C-209ENST00000584250 NPATQ14207 1427 aa38.11■■■■□ 3.69
TTC39C-209ENST00000584250 UHRF1BP1Q6BDS2 1440 aa38.11■■■■□ 3.69
TTC39C-209ENST00000584250 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.1■■■■□ 3.69
TTC39C-209ENST00000584250 ABCC3O15438 1527 aa38.1■■■■□ 3.69
TTC39C-209ENST00000584250 FAM135AQ9P2D6 1515 aa38.1■■■■□ 3.69
TTC39C-209ENST00000584250 FBXO31Q5XUX0 539 aaPredicted RBP38.08■■■■□ 3.69
TTC39C-209ENST00000584250 CEP152O94986 1710 aa38.07■■■■□ 3.68
TTC39C-209ENST00000584250 PRDM15P57071 1507 aaPredicted RBP38.04■■■■□ 3.68
TTC39C-209ENST00000584250 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.04■■■■□ 3.68
TTC39C-209ENST00000584250 DEPDC5O75140 1603 aa38.03■■■■□ 3.68
TTC39C-209ENST00000584250 PZPP20742 1482 aa38.03■■■■□ 3.68
TTC39C-209ENST00000584250 ZC3H13Q5T200 1668 aaKnown RBP38.01■■■■□ 3.67
TTC39C-209ENST00000584250 ANKRD50Q9ULJ7 1429 aa38■■■■□ 3.67
TTC39C-209ENST00000584250 ROCK1Q13464 1354 aa37.98■■■■□ 3.67
TTC39C-209ENST00000584250 MYO3AQ8NEV4 1616 aa37.98■■■■□ 3.67
TTC39C-209ENST00000584250 CAMSAP1Q5T5Y3 1602 aa37.96■■■■□ 3.67
TTC39C-209ENST00000584250 VWDEQ8N2E2 1590 aa37.91■■■■□ 3.66
TTC39C-209ENST00000584250 TNRQ92752 1358 aa37.91■■■■□ 3.66
TTC39C-209ENST00000584250 CFAP65Q6ZU64 1925 aaKnown RBP37.9■■■■□ 3.66
TTC39C-209ENST00000584250 CEP170BQ9Y4F5 1589 aaPredicted RBP37.88■■■■□ 3.65
TTC39C-209ENST00000584250 STRCQ7RTU9 1775 aa37.88■■■■□ 3.65
TTC39C-209ENST00000584250 ZNF142P52746 1687 aaPredicted RBP37.87■■■■□ 3.65
TTC39C-209ENST00000584250 KANK1Q14678 1352 aa37.86■■■■□ 3.65
TTC39C-209ENST00000584250 ERVK-7P63135 1459 aa37.84■■■■□ 3.65
TTC39C-209ENST00000584250 SPATA31D1Q6ZQQ2 1576 aa37.83■■■■□ 3.65
TTC39C-209ENST00000584250 LMTK2Q8IWU2 1503 aa37.81■■■■□ 3.64
TTC39C-209ENST00000584250 A2ML1A8K2U0 1454 aa37.8■■■■□ 3.64
TTC39C-209ENST00000584250 ARHGAP31Q2M1Z3 1444 aa37.79■■■■□ 3.64
TTC39C-209ENST00000584250 UNC13BO14795 1591 aa37.78■■■■□ 3.64
TTC39C-209ENST00000584250 EFCAB6Q5THR3 1501 aa37.71■■■■□ 3.63
TTC39C-209ENST00000584250 NAIPQ13075 1403 aa37.71■■■■□ 3.63
TTC39C-209ENST00000584250 NLRP1Q9C000 1473 aa37.7■■■■□ 3.63
TTC39C-209ENST00000584250 NCKAP5LQ9HCH0 1330 aa37.68■■■■□ 3.62
TTC39C-209ENST00000584250 TET3O43151 1660 aa37.65■■■■□ 3.62
TTC39C-209ENST00000584250 GCC2Q8IWJ2 1684 aa37.65■■■■□ 3.62
TTC39C-209ENST00000584250 PLA2R1Q13018 1463 aa37.64■■■■□ 3.62
TTC39C-209ENST00000584250 UGGT1Q9NYU2 1555 aa37.63■■■■□ 3.62
TTC39C-209ENST00000584250 NUP155O75694 1391 aa37.63■■■■□ 3.61
TTC39C-209ENST00000584250 IQGAP3Q86VI3 1631 aa37.62■■■■□ 3.61
TTC39C-209ENST00000584250 SYNMO15061 1565 aa37.61■■■■□ 3.61
TTC39C-209ENST00000584250 HFM1A2PYH4 1435 aa37.6■■■■□ 3.61
TTC39C-209ENST00000584250 NOS1P29475 1434 aa37.59■■■■□ 3.61
TTC39C-209ENST00000584250 PTPRTO14522 1441 aa37.57■■■■□ 3.6
TTC39C-209ENST00000584250 DMRT2Q9Y5R5 561 aa37.56■■■■□ 3.6
TTC39C-209ENST00000584250 E9PCH4 1651 aa37.56■■■■□ 3.6
TTC39C-209ENST00000584250 UBR1Q8IWV7 1749 aa37.54■■■■□ 3.6
TTC39C-209ENST00000584250 PIK3C2BO00750 1634 aa37.54■■■■□ 3.6
TTC39C-209ENST00000584250 THEMISQ8N1K5 641 aaPredicted RBP37.53■■■■□ 3.6
TTC39C-209ENST00000584250 RPRD2Q5VT52 1461 aaKnown RBP37.52■■■■□ 3.6
TTC39C-209ENST00000584250 PKD2Q13563 968 aa37.52■■■■□ 3.6
TTC39C-209ENST00000584250 IDI1Q13907 227 aa37.52■■■■□ 3.6
TTC39C-209ENST00000584250 NEURL4Q96JN8 1562 aa37.49■■■■□ 3.59
TTC39C-209ENST00000584250 POLR1AO95602 1720 aaPredicted RBP37.47■■■■□ 3.59
TTC39C-209ENST00000584250 ANKLE2Q86XL3 938 aa37.42■■■■□ 3.58
TTC39C-209ENST00000584250 TRIM52Q96A61 297 aa37.39■■■■□ 3.58
TTC39C-209ENST00000584250 ARHGAP23Q9P227 1491 aa37.37■■■■□ 3.57
TTC39C-209ENST00000584250 SLC52A1Q9NWF4 448 aa37.36■■■■□ 3.57
TTC39C-209ENST00000584250 STAG3Q9UJ98 1225 aa37.36■■■■□ 3.57
TTC39C-209ENST00000584250 LTKP29376 864 aa37.35■■■■□ 3.57
TTC39C-209ENST00000584250 SLIT1O75093 1534 aa37.35■■■■□ 3.57
TTC39C-209ENST00000584250 ADGRB3O60242 1522 aa37.34■■■■□ 3.57
TTC39C-209ENST00000584250 ZNF335Q9H4Z2 1342 aaPredicted RBP37.33■■■■□ 3.57
TTC39C-209ENST00000584250 NPHP4O75161 1426 aaPredicted RBP37.32■■■■□ 3.56
TTC39C-209ENST00000584250 MED14O60244 1454 aa37.32■■■■□ 3.56
TTC39C-209ENST00000584250 LTBP4Q8N2S1 1624 aa37.32■■■■□ 3.56
TTC39C-209ENST00000584250 MYO5BQ9ULV0 1848 aa37.31■■■■□ 3.56
TTC39C-209ENST00000584250 KDM5AP29375 1690 aaKnown RBP37.31■■■■□ 3.56
TTC39C-209ENST00000584250 TMEM2Q9UHN6 1383 aa37.3■■■■□ 3.56
TTC39C-209ENST00000584250 CERKQ8TCT0 537 aa37.29■■■■□ 3.56
TTC39C-209ENST00000584250 SCAF11Q99590 1463 aaKnown RBP37.28■■■■□ 3.56
TTC39C-209ENST00000584250 TXNDC2Q86VQ3 553 aa37.28■■■■□ 3.56
TTC39C-209ENST00000584250 SPHKAPQ2M3C7 1700 aa37.27■■■■□ 3.56
TTC39C-209ENST00000584250 TMEM131LA2VDJ0 1609 aa37.26■■■■□ 3.56
TTC39C-209ENST00000584250 IQGAP1P46940 1657 aa37.26■■■■□ 3.56
TTC39C-209ENST00000584250 ILDR1Q86SU0 546 aaPredicted RBP37.25■■■■□ 3.55
TTC39C-209ENST00000584250 SETD5Q9C0A6 1442 aa37.24■■■■□ 3.55
TTC39C-209ENST00000584250 CHGAP10645 457 aaKnown RBP37.22■■■■□ 3.55
TTC39C-209ENST00000584250 SLC4A1APQ9BWU0 796 aaKnown RBP37.22■■■■□ 3.55
TTC39C-209ENST00000584250 EID1Q9Y6B2 187 aa37.18■■■■□ 3.54
TTC39C-209ENST00000584250 FOXD1Q16676 465 aa37.17■■■■□ 3.54
TTC39C-209ENST00000584250 RAB3GAP2Q9H2M9 1393 aa37.16■■■■□ 3.54
TTC39C-209ENST00000584250 ZFYVE9O95405 1425 aa37.15■■■■□ 3.54
TTC39C-209ENST00000584250 CLTCL1P53675 1640 aa37.14■■■■□ 3.54
TTC39C-209ENST00000584250 SENP3Q9H4L4 574 aaPredicted RBP37.14■■■■□ 3.54
TTC39C-209ENST00000584250 TRPM2O94759 1503 aa37.13■■■■□ 3.53
TTC39C-209ENST00000584250 RIMS2Q9UQ26 1411 aa37.11■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms