RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 TRIM52Q96A61 297 aa16.29■□□□□ 0.2
TOP3A-216ENST00000583804 RAB3GAP2Q9H2M9 1393 aa16.29■□□□□ 0.2
TOP3A-216ENST00000583804 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
TOP3A-216ENST00000583804 EIF2AK4Q9P2K8 1649 aaKnown RBP16.28■□□□□ 0.2
TOP3A-216ENST00000583804 ESF1Q9H501 851 aaKnown RBP16.28■□□□□ 0.2
TOP3A-216ENST00000583804 WASHC2CQ9Y4E1 1318 aa16.25■□□□□ 0.19
TOP3A-216ENST00000583804 NUP155O75694 1391 aa16.25■□□□□ 0.19
TOP3A-216ENST00000583804 KANK1Q14678 1352 aa16.25■□□□□ 0.19
TOP3A-216ENST00000583804 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
TOP3A-216ENST00000583804 BCORL1Q5H9F3 1711 aa16.23■□□□□ 0.19
TOP3A-216ENST00000583804 KDM4FA0A1W2PPD8 638 aa16.22■□□□□ 0.19
TOP3A-216ENST00000583804 HRCP23327 699 aa16.22■□□□□ 0.19
TOP3A-216ENST00000583804 PPP6R1Q9UPN7 881 aa16.22■□□□□ 0.19
TOP3A-216ENST00000583804 RNF17Q9BXT8 1623 aaKnown RBP16.22■□□□□ 0.19
TOP3A-216ENST00000583804 ACIN1Q9UKV3 1341 aaKnown RBP16.21■□□□□ 0.19
TOP3A-216ENST00000583804 UNC13BO14795 1591 aa16.2■□□□□ 0.18
TOP3A-216ENST00000583804 DEPDC5O75140 1603 aa16.2■□□□□ 0.18
TOP3A-216ENST00000583804 MROH1Q8NDA8 1641 aa16.2■□□□□ 0.18
TOP3A-216ENST00000583804 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
TOP3A-216ENST00000583804 SLC4A1APQ9BWU0 796 aaKnown RBP16.18■□□□□ 0.18
TOP3A-216ENST00000583804 PRDM15P57071 1507 aaPredicted RBP16.18■□□□□ 0.18
TOP3A-216ENST00000583804 ABCC3O15438 1527 aa16.16■□□□□ 0.18
TOP3A-216ENST00000583804 KDM5DQ9BY66 1539 aa16.16■□□□□ 0.18
TOP3A-216ENST00000583804 MPHOSPH9Q99550 1183 aa16.16■□□□□ 0.18
TOP3A-216ENST00000583804 CNTLNQ9NXG0 1405 aa16.15■□□□□ 0.18
TOP3A-216ENST00000583804 MADDQ8WXG6 1647 aa16.15■□□□□ 0.18
TOP3A-216ENST00000583804 CCER1Q8TC90 406 aaPredicted RBP16.15■□□□□ 0.18
TOP3A-216ENST00000583804 ADAMTSL3P82987 1691 aa16.15■□□□□ 0.18
TOP3A-216ENST00000583804 CLTCQ00610 1675 aaKnown RBP16.15■□□□□ 0.18
TOP3A-216ENST00000583804 FAM135AQ9P2D6 1515 aa16.15■□□□□ 0.18
TOP3A-216ENST00000583804 FER1L4A9Z1Z3 1794 aa16.14■□□□□ 0.17
TOP3A-216ENST00000583804 ZMYM3Q14202 1370 aa16.14■□□□□ 0.17
TOP3A-216ENST00000583804 VWDEQ8N2E2 1590 aa16.14■□□□□ 0.17
TOP3A-216ENST00000583804 IQGAP3Q86VI3 1631 aa16.14■□□□□ 0.17
TOP3A-216ENST00000583804 CEP152O94986 1710 aa16.13■□□□□ 0.17
TOP3A-216ENST00000583804 PZPP20742 1482 aa16.13■□□□□ 0.17
TOP3A-216ENST00000583804 CEBPAP49715 358 aaPredicted RBP16.13■□□□□ 0.17
TOP3A-216ENST00000583804 PKD2Q13563 968 aa16.13■□□□□ 0.17
TOP3A-216ENST00000583804 LMTK2Q8IWU2 1503 aa16.12■□□□□ 0.17
TOP3A-216ENST00000583804 ZC3H13Q5T200 1668 aaKnown RBP16.11■□□□□ 0.17
TOP3A-216ENST00000583804 RIMS1Q86UR5 1692 aaKnown RBP16.11■□□□□ 0.17
TOP3A-216ENST00000583804 FOXD1Q16676 465 aa16.1■□□□□ 0.17
TOP3A-216ENST00000583804 CAMSAP1Q5T5Y3 1602 aa16.09■□□□□ 0.17
TOP3A-216ENST00000583804 FBXO31Q5XUX0 539 aaPredicted RBP16.09■□□□□ 0.17
TOP3A-216ENST00000583804 TET3O43151 1660 aa16.08■□□□□ 0.16
TOP3A-216ENST00000583804 EFCAB6Q5THR3 1501 aa16.08■□□□□ 0.16
TOP3A-216ENST00000583804 PTPRMP28827 1452 aa16.07■□□□□ 0.16
TOP3A-216ENST00000583804 NPATQ14207 1427 aa16.07■□□□□ 0.16
TOP3A-216ENST00000583804 DHX57Q6P158 1386 aaKnown RBP16.07■□□□□ 0.16
TOP3A-216ENST00000583804 ARHGAP31Q2M1Z3 1444 aa16.06■□□□□ 0.16
TOP3A-216ENST00000583804 MROH2AA6NES4 1674 aa16.06■□□□□ 0.16
TOP3A-216ENST00000583804 E9PCH4 1651 aa16.04■□□□□ 0.16
TOP3A-216ENST00000583804 C3P01024 1663 aa16.04■□□□□ 0.16
TOP3A-216ENST00000583804 RPRD2Q5VT52 1461 aaKnown RBP16.03■□□□□ 0.16
TOP3A-216ENST00000583804 CFAP65Q6ZU64 1925 aaKnown RBP16.03■□□□□ 0.16
TOP3A-216ENST00000583804 ERVK-7P63135 1459 aa16.01■□□□□ 0.15
TOP3A-216ENST00000583804 TNRQ92752 1358 aa16.01■□□□□ 0.15
TOP3A-216ENST00000583804 NOS1P29475 1434 aa15.99■□□□□ 0.15
TOP3A-216ENST00000583804 PREX1Q8TCU6 1659 aa15.98■□□□□ 0.15
TOP3A-216ENST00000583804 SPATA31D1Q6ZQQ2 1576 aa15.98■□□□□ 0.15
TOP3A-216ENST00000583804 SLC52A1Q9NWF4 448 aa15.97■□□□□ 0.15
TOP3A-216ENST00000583804 PTPRTO14522 1441 aa15.97■□□□□ 0.15
TOP3A-216ENST00000583804 PLA2R1Q13018 1463 aa15.97■□□□□ 0.15
TOP3A-216ENST00000583804 ANKRD30BQ9BXX2 1392 aa15.97■□□□□ 0.15
TOP3A-216ENST00000583804 IDI1Q13907 227 aa15.97■□□□□ 0.15
TOP3A-216ENST00000583804 CHGAP10645 457 aaKnown RBP15.96■□□□□ 0.14
TOP3A-216ENST00000583804 SPHKAPQ2M3C7 1700 aa15.95■□□□□ 0.14
TOP3A-216ENST00000583804 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
TOP3A-216ENST00000583804 SYNMO15061 1565 aa15.95■□□□□ 0.14
TOP3A-216ENST00000583804 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
TOP3A-216ENST00000583804 TRPM2O94759 1503 aa15.94■□□□□ 0.14
TOP3A-216ENST00000583804 UGGT1Q9NYU2 1555 aa15.93■□□□□ 0.14
TOP3A-216ENST00000583804 NEUROD1Q13562 356 aa15.93■□□□□ 0.14
TOP3A-216ENST00000583804 SIN3AQ96ST3 1273 aa15.92■□□□□ 0.14
TOP3A-216ENST00000583804 NLRP1Q9C000 1473 aa15.91■□□□□ 0.14
TOP3A-216ENST00000583804 SETD1BQ9UPS6 1966 aaKnown RBP15.9■□□□□ 0.14
TOP3A-216ENST00000583804 UHRF1BP1Q6BDS2 1440 aa15.9■□□□□ 0.14
TOP3A-216ENST00000583804 CLTCL1P53675 1640 aa15.89■□□□□ 0.13
TOP3A-216ENST00000583804 MYO3AQ8NEV4 1616 aa15.88■□□□□ 0.13
TOP3A-216ENST00000583804 RGL3Q3MIN7 710 aa15.88■□□□□ 0.13
TOP3A-216ENST00000583804 ZNF326Q5BKZ1 582 aaKnown RBP15.88■□□□□ 0.13
TOP3A-216ENST00000583804 A2ML1A8K2U0 1454 aa15.87■□□□□ 0.13
TOP3A-216ENST00000583804 PIK3C2BO00750 1634 aa15.87■□□□□ 0.13
TOP3A-216ENST00000583804 THEMISQ8N1K5 641 aaPredicted RBP15.87■□□□□ 0.13
TOP3A-216ENST00000583804 CLSPNQ9HAW4 1339 aa15.87■□□□□ 0.13
TOP3A-216ENST00000583804 CEP170BQ9Y4F5 1589 aaPredicted RBP15.86■□□□□ 0.13
TOP3A-216ENST00000583804 ADGRB3O60242 1522 aa15.83■□□□□ 0.13
TOP3A-216ENST00000583804 HSPA2P54652 639 aa15.83■□□□□ 0.12
TOP3A-216ENST00000583804 ILDR1Q86SU0 546 aaPredicted RBP15.83■□□□□ 0.12
TOP3A-216ENST00000583804 KIF1BO60333 1816 aa15.82■□□□□ 0.12
TOP3A-216ENST00000583804 TMEM131LA2VDJ0 1609 aa15.82■□□□□ 0.12
TOP3A-216ENST00000583804 SPATA31E1Q6ZUB1 1445 aa15.81■□□□□ 0.12
TOP3A-216ENST00000583804 UBR1Q8IWV7 1749 aa15.81■□□□□ 0.12
TOP3A-216ENST00000583804 LMTK3Q96Q04 1460 aa15.8■□□□□ 0.12
TOP3A-216ENST00000583804 NUTM2DQ5VT03 806 aaPredicted RBP15.8■□□□□ 0.12
TOP3A-216ENST00000583804 ZNF142P52746 1687 aaPredicted RBP15.8■□□□□ 0.12
TOP3A-216ENST00000583804 HDGFP51858 240 aaKnown RBP15.79■□□□□ 0.12
TOP3A-216ENST00000583804 TXNDC2Q86VQ3 553 aa15.79■□□□□ 0.12
TOP3A-216ENST00000583804 KDM2AQ9Y2K7 1162 aa15.79■□□□□ 0.12
TOP3A-216ENST00000583804 EID1Q9Y6B2 187 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms