RNA–Protein interactions for RNA: ENST00000583226.1

NCOR1-223, Transcript of nuclear receptor corepressor 1, human

TSL 5

Gene NCOR1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-223	ENST00000583226	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	14.09	□□□□□ -0.15
NCOR1-223	ENST00000583226	RUSC2	Q8N2Y8	1516 aa		14.09	□□□□□ -0.15
NCOR1-223	ENST00000583226	ZNF710	Q8N1W2	664 aa		14.06	□□□□□ -0.16
NCOR1-223	ENST00000583226	POTEM	A6NI47	508 aa		14.05	□□□□□ -0.16
NCOR1-223	ENST00000583226	DOK7	Q18PE1	504 aa		14.04	□□□□□ -0.16
NCOR1-223	ENST00000583226	POTEG	Q6S5H5	508 aa		14.04	□□□□□ -0.16
NCOR1-223	ENST00000583226	TOP2B	Q02880	1626 aa		14.04	□□□□□ -0.16
NCOR1-223	ENST00000583226	HOXB3	P14651	431 aa	Predicted RBP	14.03	□□□□□ -0.16
NCOR1-223	ENST00000583226	CFAP44	Q96MT7	982 aa		14.03	□□□□□ -0.16
NCOR1-223	ENST00000583226	BIVM-ERCC5	R4GMW8	1640 aa		14.03	□□□□□ -0.16
NCOR1-223	ENST00000583226	PPRC1	Q5VV67	1664 aa	Known RBP	14.02	□□□□□ -0.16
NCOR1-223	ENST00000583226	GLI2	P10070	1586 aa		14.02	□□□□□ -0.16
NCOR1-223	ENST00000583226	KIF3C	O14782	793 aa		14.01	□□□□□ -0.17
NCOR1-223	ENST00000583226	SPRYD3	Q8NCJ5	442 aa		14.01	□□□□□ -0.17
NCOR1-223	ENST00000583226	KIAA0586	Q9BVV6	1533 aa		14	□□□□□ -0.17
NCOR1-223	ENST00000583226	PLB1	Q6P1J6	1458 aa		14	□□□□□ -0.17
NCOR1-223	ENST00000583226	COL17A1	Q9UMD9	1497 aa	Predicted RBP	14	□□□□□ -0.17
NCOR1-223	ENST00000583226	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	14	□□□□□ -0.17
NCOR1-223	ENST00000583226	MARVELD3	Q96A59	401 aa		14	□□□□□ -0.17
NCOR1-223	ENST00000583226	ABCC2	Q92887	1545 aa		13.99	□□□□□ -0.17
NCOR1-223	ENST00000583226	ASXL2	Q76L83	1435 aa		13.98	□□□□□ -0.17
NCOR1-223	ENST00000583226	RIMBP2	O15034	1052 aa		13.98	□□□□□ -0.17
NCOR1-223	ENST00000583226	PTPRG	P23470	1445 aa		13.98	□□□□□ -0.17
NCOR1-223	ENST00000583226	GPHN	Q9NQX3	736 aa	Predicted RBP	13.95	□□□□□ -0.18
NCOR1-223	ENST00000583226	TEX14	Q8IWB6	1497 aa		13.93	□□□□□ -0.18
NCOR1-223	ENST00000583226	EMP3	P54852	163 aa		13.93	□□□□□ -0.18
NCOR1-223	ENST00000583226	DSG2	Q14126	1118 aa		13.91	□□□□□ -0.18
NCOR1-223	ENST00000583226	MAP3K4	Q9Y6R4	1608 aa		13.9	□□□□□ -0.18
NCOR1-223	ENST00000583226	PLPP6	Q8IY26	295 aa		13.9	□□□□□ -0.18
NCOR1-223	ENST00000583226	TNIK	Q9UKE5	1360 aa		13.9	□□□□□ -0.18
NCOR1-223	ENST00000583226	UHRF1BP1L	A0JNW5	1464 aa		13.9	□□□□□ -0.18
NCOR1-223	ENST00000583226	EPRS	P07814	1512 aa	Known RBP	13.9	□□□□□ -0.19
NCOR1-223	ENST00000583226	PDE4A	P27815	886 aa		13.89	□□□□□ -0.19
NCOR1-223	ENST00000583226	CADPS2	Q86UW7	1296 aa		13.89	□□□□□ -0.19
NCOR1-223	ENST00000583226	NCKAP5L	Q9HCH0	1330 aa		13.89	□□□□□ -0.19
NCOR1-223	ENST00000583226	FOXK1	P85037	733 aa		13.88	□□□□□ -0.19
NCOR1-223	ENST00000583226	ARSI	Q5FYB1	569 aa		13.88	□□□□□ -0.19
NCOR1-223	ENST00000583226	LARP6	Q9BRS8	491 aa	Known RBP	13.88	□□□□□ -0.19
NCOR1-223	ENST00000583226	CRISPLD2	Q9H0B8	497 aa		13.88	□□□□□ -0.19
NCOR1-223	ENST00000583226	CARMIL2	Q6F5E8	1435 aa		13.88	□□□□□ -0.19
NCOR1-223	ENST00000583226	HOXB1	P14653	301 aa	Predicted RBP	13.87	□□□□□ -0.19
NCOR1-223	ENST00000583226	LMTK3	Q96Q04	1460 aa		13.87	□□□□□ -0.19
NCOR1-223	ENST00000583226	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
NCOR1-223	ENST00000583226	ZSWIM6	Q9HCJ5	1215 aa		13.86	□□□□□ -0.19
NCOR1-223	ENST00000583226	CUL7	Q14999	1698 aa		13.85	□□□□□ -0.19
NCOR1-223	ENST00000583226	IGF1R	P08069	1367 aa		13.85	□□□□□ -0.19
NCOR1-223	ENST00000583226	UACA	Q9BZF9	1416 aa		13.85	□□□□□ -0.19
NCOR1-223	ENST00000583226	FAM205C	A6NFA0	338 aa		13.85	□□□□□ -0.19
NCOR1-223	ENST00000583226	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.85	□□□□□ -0.19
NCOR1-223	ENST00000583226	PPP1R15B	Q5SWA1	713 aa		13.84	□□□□□ -0.19
NCOR1-223	ENST00000583226	KDM5B	Q9UGL1	1544 aa		13.84	□□□□□ -0.19
NCOR1-223	ENST00000583226	GPR153	Q6NV75	609 aa		13.83	□□□□□ -0.2
NCOR1-223	ENST00000583226	DDX27	Q96GQ7	796 aa	Known RBP	13.81	□□□□□ -0.2
NCOR1-223	ENST00000583226	ERBB3	P21860	1342 aa		13.81	□□□□□ -0.2
NCOR1-223	ENST00000583226	PCDHGA4	Q9Y5G9	962 aa		13.8	□□□□□ -0.2
NCOR1-223	ENST00000583226	SLC34A2	O95436	690 aa		13.78	□□□□□ -0.2
NCOR1-223	ENST00000583226	NUDT7	P0C024	238 aa		13.78	□□□□□ -0.2
NCOR1-223	ENST00000583226	CDAN1	Q8IWY9	1227 aa		13.78	□□□□□ -0.2
NCOR1-223	ENST00000583226	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
NCOR1-223	ENST00000583226	HS3ST6	Q96QI5	342 aa		13.78	□□□□□ -0.2
NCOR1-223	ENST00000583226	KIF27	Q86VH2	1401 aa		13.77	□□□□□ -0.21
NCOR1-223	ENST00000583226	MAGI3	Q5TCQ9	1506 aa		13.76	□□□□□ -0.21
NCOR1-223	ENST00000583226	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.75	□□□□□ -0.21
NCOR1-223	ENST00000583226	WDR7	Q9Y4E6	1490 aa		13.75	□□□□□ -0.21
NCOR1-223	ENST00000583226	SOCS7	O14512	581 aa		13.75	□□□□□ -0.21
NCOR1-223	ENST00000583226	IQGAP2	Q13576	1575 aa		13.75	□□□□□ -0.21
NCOR1-223	ENST00000583226	DISP1	Q96F81	1524 aa		13.74	□□□□□ -0.21
NCOR1-223	ENST00000583226	PTPRM	P28827	1452 aa		13.74	□□□□□ -0.21
NCOR1-223	ENST00000583226	VARS2	Q5ST30	1063 aa	Known RBP	13.74	□□□□□ -0.21
NCOR1-223	ENST00000583226	CD109	Q6YHK3	1445 aa		13.73	□□□□□ -0.21
NCOR1-223	ENST00000583226	CARMIL1	Q5VZK9	1371 aa		13.73	□□□□□ -0.21
NCOR1-223	ENST00000583226	KIF21B	O75037	1637 aa		13.73	□□□□□ -0.21
NCOR1-223	ENST00000583226	POTEB3	A0JP26	581 aa		13.73	□□□□□ -0.21
NCOR1-223	ENST00000583226	POTEB	Q6S5H4	581 aa		13.73	□□□□□ -0.21
NCOR1-223	ENST00000583226	TBC1D12	O60347	775 aa		13.72	□□□□□ -0.21
NCOR1-223	ENST00000583226	MFSD10	Q14728	455 aa		13.72	□□□□□ -0.21
NCOR1-223	ENST00000583226	PTCD2	Q8WV60	388 aa	Known RBP	13.72	□□□□□ -0.21
NCOR1-223	ENST00000583226	PCF11	O94913	1555 aa	Known RBP	13.71	□□□□□ -0.22
NCOR1-223	ENST00000583226	ADAMTSL3	P82987	1691 aa		13.7	□□□□□ -0.22
NCOR1-223	ENST00000583226	CFAP43	Q8NDM7	1665 aa		13.7	□□□□□ -0.22
NCOR1-223	ENST00000583226	ILDR2	Q71H61	639 aa		13.7	□□□□□ -0.22
NCOR1-223	ENST00000583226	PCDH10	Q9P2E7	1040 aa		13.7	□□□□□ -0.22
NCOR1-223	ENST00000583226	ARAP3	Q8WWN8	1544 aa		13.69	□□□□□ -0.22
NCOR1-223	ENST00000583226	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.68	□□□□□ -0.22
NCOR1-223	ENST00000583226	TSHZ2	Q9NRE2	1034 aa		13.68	□□□□□ -0.22
NCOR1-223	ENST00000583226	SUPT5H	O00267	1087 aa	Known RBP	13.67	□□□□□ -0.22
NCOR1-223	ENST00000583226	LHX6	Q9UPM6	363 aa		13.67	□□□□□ -0.22
NCOR1-223	ENST00000583226	UGGT2	Q9NYU1	1516 aa		13.67	□□□□□ -0.22
NCOR1-223	ENST00000583226	OXER1	Q8TDS5	423 aa		13.66	□□□□□ -0.22
NCOR1-223	ENST00000583226	DISP3	Q9P2K9	1392 aa		13.66	□□□□□ -0.22
NCOR1-223	ENST00000583226	CERK	Q8TCT0	537 aa		13.65	□□□□□ -0.22
NCOR1-223	ENST00000583226	KCNH8	Q96L42	1107 aa		13.64	□□□□□ -0.23
NCOR1-223	ENST00000583226	WDR70	Q9NW82	654 aa		13.64	□□□□□ -0.23
NCOR1-223	ENST00000583226	MAP3K9	P80192	1104 aa		13.63	□□□□□ -0.23
NCOR1-223	ENST00000583226	PHLDB1	Q86UU1	1377 aa		13.62	□□□□□ -0.23
NCOR1-223	ENST00000583226	KIAA0556	O60303	1618 aa		13.62	□□□□□ -0.23
NCOR1-223	ENST00000583226	PLCB2	Q00722	1185 aa		13.62	□□□□□ -0.23
NCOR1-223	ENST00000583226	EMILIN3	Q9NT22	766 aa		13.61	□□□□□ -0.23
NCOR1-223	ENST00000583226	PLSCR2	Q9NRY7	297 aa		13.6	□□□□□ -0.23
NCOR1-223	ENST00000583226	BCORL1	Q5H9F3	1711 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 189.4 ms