RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 MROH2AA6NES4 1674 aa19.33■□□□□ 0.69
SMARCE1-218ENST00000582955 ANKRD30AQ9BXX3 1397 aa19.33■□□□□ 0.69
SMARCE1-218ENST00000582955 PPP6R1Q9UPN7 881 aa19.33■□□□□ 0.68
SMARCE1-218ENST00000582955 EIF2AK4Q9P2K8 1649 aaKnown RBP19.32■□□□□ 0.68
SMARCE1-218ENST00000582955 ZMYM3Q14202 1370 aa19.32■□□□□ 0.68
SMARCE1-218ENST00000582955 LMTK3Q96Q04 1460 aa19.31■□□□□ 0.68
SMARCE1-218ENST00000582955 ERBINQ96RT1 1412 aa19.29■□□□□ 0.68
SMARCE1-218ENST00000582955 KDM5DQ9BY66 1539 aa19.29■□□□□ 0.68
SMARCE1-218ENST00000582955 RNF17Q9BXT8 1623 aaKnown RBP19.29■□□□□ 0.68
SMARCE1-218ENST00000582955 WASHC2CQ9Y4E1 1318 aa19.28■□□□□ 0.68
SMARCE1-218ENST00000582955 NCOA1Q15788 1441 aa19.28■□□□□ 0.68
SMARCE1-218ENST00000582955 PREX1Q8TCU6 1659 aa19.28■□□□□ 0.68
SMARCE1-218ENST00000582955 ADGRL2O95490 1459 aa19.28■□□□□ 0.68
SMARCE1-218ENST00000582955 FAM135AQ9P2D6 1515 aa19.27■□□□□ 0.68
SMARCE1-218ENST00000582955 ITGAEP38570 1179 aa19.27■□□□□ 0.68
SMARCE1-218ENST00000582955 UHRF1BP1Q6BDS2 1440 aa19.26■□□□□ 0.67
SMARCE1-218ENST00000582955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMARCE1-218ENST00000582955 HSPA2P54652 639 aa19.25■□□□□ 0.67
SMARCE1-218ENST00000582955 PTPRKQ15262 1439 aa19.25■□□□□ 0.67
SMARCE1-218ENST00000582955 SETD1BQ9UPS6 1966 aaKnown RBP19.24■□□□□ 0.67
SMARCE1-218ENST00000582955 NPATQ14207 1427 aa19.24■□□□□ 0.67
SMARCE1-218ENST00000582955 MROH1Q8NDA8 1641 aa19.23■□□□□ 0.67
SMARCE1-218ENST00000582955 RRBP1Q9P2E9 1410 aaKnown RBP19.23■□□□□ 0.67
SMARCE1-218ENST00000582955 ABCC3O15438 1527 aa19.21■□□□□ 0.67
SMARCE1-218ENST00000582955 ZC3H13Q5T200 1668 aaKnown RBP19.21■□□□□ 0.67
SMARCE1-218ENST00000582955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.21■□□□□ 0.672e-8■□□□□ 8.4
SMARCE1-218ENST00000582955 PRDM15P57071 1507 aaPredicted RBP19.2■□□□□ 0.66
SMARCE1-218ENST00000582955 PZPP20742 1482 aa19.19■□□□□ 0.66
SMARCE1-218ENST00000582955 ROCK1Q13464 1354 aa19.19■□□□□ 0.66
SMARCE1-218ENST00000582955 ANKRD50Q9ULJ7 1429 aa19.18■□□□□ 0.66
SMARCE1-218ENST00000582955 CEP152O94986 1710 aa19.18■□□□□ 0.66
SMARCE1-218ENST00000582955 DEPDC5O75140 1603 aa19.18■□□□□ 0.66
SMARCE1-218ENST00000582955 KANK1Q14678 1352 aa19.18■□□□□ 0.66
SMARCE1-218ENST00000582955 FBXO31Q5XUX0 539 aaPredicted RBP19.17■□□□□ 0.66
SMARCE1-218ENST00000582955 PIAS4Q8N2W9 510 aaPredicted RBP19.16■□□□□ 0.66
SMARCE1-218ENST00000582955 MYO3AQ8NEV4 1616 aa19.15■□□□□ 0.66
SMARCE1-218ENST00000582955 CAMSAP1Q5T5Y3 1602 aa19.14■□□□□ 0.66
SMARCE1-218ENST00000582955 TNRQ92752 1358 aa19.14■□□□□ 0.65
SMARCE1-218ENST00000582955 CEP170BQ9Y4F5 1589 aaPredicted RBP19.11■□□□□ 0.65
SMARCE1-218ENST00000582955 ZNF142P52746 1687 aaPredicted RBP19.1■□□□□ 0.65
SMARCE1-218ENST00000582955 VWDEQ8N2E2 1590 aa19.09■□□□□ 0.65
SMARCE1-218ENST00000582955 ERVK-7P63135 1459 aa19.09■□□□□ 0.65
SMARCE1-218ENST00000582955 A2ML1A8K2U0 1454 aa19.08■□□□□ 0.64
SMARCE1-218ENST00000582955 ARHGAP31Q2M1Z3 1444 aa19.08■□□□□ 0.64
SMARCE1-218ENST00000582955 SPATA31D1Q6ZQQ2 1576 aa19.07■□□□□ 0.64
SMARCE1-218ENST00000582955 LMTK2Q8IWU2 1503 aa19.07■□□□□ 0.64
SMARCE1-218ENST00000582955 UNC13BO14795 1591 aa19.06■□□□□ 0.64
SMARCE1-218ENST00000582955 CFAP65Q6ZU64 1925 aaKnown RBP19.06■□□□□ 0.64
SMARCE1-218ENST00000582955 NLRP1Q9C000 1473 aa19.05■□□□□ 0.64
SMARCE1-218ENST00000582955 STRCQ7RTU9 1775 aa19.04■□□□□ 0.64
SMARCE1-218ENST00000582955 EFCAB6Q5THR3 1501 aa19.04■□□□□ 0.64
SMARCE1-218ENST00000582955 NAIPQ13075 1403 aa19.01■□□□□ 0.63
SMARCE1-218ENST00000582955 DMRT2Q9Y5R5 561 aa19.01■□□□□ 0.63
SMARCE1-218ENST00000582955 NUP155O75694 1391 aa19.01■□□□□ 0.63
SMARCE1-218ENST00000582955 GCC2Q8IWJ2 1684 aa19.01■□□□□ 0.63
SMARCE1-218ENST00000582955 PLA2R1Q13018 1463 aa19■□□□□ 0.63
SMARCE1-218ENST00000582955 UGGT1Q9NYU2 1555 aa19■□□□□ 0.63
SMARCE1-218ENST00000582955 TET3O43151 1660 aa19■□□□□ 0.63
SMARCE1-218ENST00000582955 IQGAP3Q86VI3 1631 aa18.99■□□□□ 0.63
SMARCE1-218ENST00000582955 HFM1A2PYH4 1435 aa18.99■□□□□ 0.63
SMARCE1-218ENST00000582955 NCKAP5LQ9HCH0 1330 aa18.99■□□□□ 0.63
SMARCE1-218ENST00000582955 THEMISQ8N1K5 641 aaPredicted RBP18.97■□□□□ 0.63
SMARCE1-218ENST00000582955 RPRD2Q5VT52 1461 aaKnown RBP18.97■□□□□ 0.63
SMARCE1-218ENST00000582955 PTPRTO14522 1441 aa18.95■□□□□ 0.62
SMARCE1-218ENST00000582955 PKD2Q13563 968 aa18.95■□□□□ 0.62
SMARCE1-218ENST00000582955 SYNMO15061 1565 aa18.94■□□□□ 0.62
SMARCE1-218ENST00000582955 NOS1P29475 1434 aa18.94■□□□□ 0.62
SMARCE1-218ENST00000582955 STAG3Q9UJ98 1225 aa18.93■□□□□ 0.62
SMARCE1-218ENST00000582955 E9PCH4 1651 aa18.92■□□□□ 0.62
SMARCE1-218ENST00000582955 UBR1Q8IWV7 1749 aa18.92■□□□□ 0.62
SMARCE1-218ENST00000582955 PIK3C2BO00750 1634 aa18.92■□□□□ 0.62
SMARCE1-218ENST00000582955 ANKLE2Q86XL3 938 aa18.91■□□□□ 0.62
SMARCE1-218ENST00000582955 TRIM52Q96A61 297 aa18.91■□□□□ 0.62
SMARCE1-218ENST00000582955 POLR1AO95602 1720 aaPredicted RBP18.91■□□□□ 0.62
SMARCE1-218ENST00000582955 IDI1Q13907 227 aa18.9■□□□□ 0.62
SMARCE1-218ENST00000582955 SLC52A1Q9NWF4 448 aa18.88■□□□□ 0.61
SMARCE1-218ENST00000582955 NEURL4Q96JN8 1562 aa18.87■□□□□ 0.61
SMARCE1-218ENST00000582955 ADGRB3O60242 1522 aa18.85■□□□□ 0.61
SMARCE1-218ENST00000582955 KDM5AP29375 1690 aaKnown RBP18.84■□□□□ 0.61
SMARCE1-218ENST00000582955 NPHP4O75161 1426 aaPredicted RBP18.83■□□□□ 0.61
SMARCE1-218ENST00000582955 EID1Q9Y6B2 187 aa18.83■□□□□ 0.6
SMARCE1-218ENST00000582955 SLIT1O75093 1534 aa18.83■□□□□ 0.6
SMARCE1-218ENST00000582955 SCAF11Q99590 1463 aaKnown RBP18.83■□□□□ 0.6
SMARCE1-218ENST00000582955 ARHGAP23Q9P227 1491 aa18.83■□□□□ 0.6
SMARCE1-218ENST00000582955 TMEM2Q9UHN6 1383 aa18.82■□□□□ 0.6
SMARCE1-218ENST00000582955 CHGAP10645 457 aaKnown RBP18.82■□□□□ 0.6
SMARCE1-218ENST00000582955 TXNDC2Q86VQ3 553 aa18.82■□□□□ 0.6
SMARCE1-218ENST00000582955 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
SMARCE1-218ENST00000582955 SETD5Q9C0A6 1442 aa18.82■□□□□ 0.6
SMARCE1-218ENST00000582955 SPHKAPQ2M3C7 1700 aa18.81■□□□□ 0.6
SMARCE1-218ENST00000582955 MED14O60244 1454 aa18.81■□□□□ 0.6
SMARCE1-218ENST00000582955 ZNF335Q9H4Z2 1342 aaPredicted RBP18.8■□□□□ 0.6
SMARCE1-218ENST00000582955 IQGAP1P46940 1657 aa18.8■□□□□ 0.6
SMARCE1-218ENST00000582955 LTKP29376 864 aa18.8■□□□□ 0.6
SMARCE1-218ENST00000582955 CERKQ8TCT0 537 aa18.8■□□□□ 0.6
SMARCE1-218ENST00000582955 TMEM131LA2VDJ0 1609 aa18.78■□□□□ 0.6
SMARCE1-218ENST00000582955 LTBP4Q8N2S1 1624 aa18.77■□□□□ 0.6
SMARCE1-218ENST00000582955 MYO5BQ9ULV0 1848 aa18.77■□□□□ 0.59
SMARCE1-218ENST00000582955 RAB3GAP2Q9H2M9 1393 aa18.76■□□□□ 0.59
SMARCE1-218ENST00000582955 TRPM2O94759 1503 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms