RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 UNC13BO14795 1591 aa14.22□□□□□ -0.13
RFFL-210ENST00000582308 MROH1Q8NDA8 1641 aa14.21□□□□□ -0.13
RFFL-210ENST00000582308 TRIM52Q96A61 297 aa14.18□□□□□ -0.14
RFFL-210ENST00000582308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.18□□□□□ -0.14
RFFL-210ENST00000582308 ARID4BQ4LE39 1312 aaPredicted RBP14.17□□□□□ -0.14
RFFL-210ENST00000582308 PRDM15P57071 1507 aaPredicted RBP14.17□□□□□ -0.14
RFFL-210ENST00000582308 GGT6Q6P531 493 aa14.17□□□□□ -0.14
RFFL-210ENST00000582308 IQGAP3Q86VI3 1631 aa14.16□□□□□ -0.14
RFFL-210ENST00000582308 NUP155O75694 1391 aa14.16□□□□□ -0.14
RFFL-210ENST00000582308 VWDEQ8N2E2 1590 aa14.16□□□□□ -0.14
RFFL-210ENST00000582308 ACIN1Q9UKV3 1341 aaKnown RBP14.15□□□□□ -0.14
RFFL-210ENST00000582308 KDM5DQ9BY66 1539 aa14.15□□□□□ -0.14
RFFL-210ENST00000582308 CEP152O94986 1710 aa14.15□□□□□ -0.14
RFFL-210ENST00000582308 PZPP20742 1482 aa14.15□□□□□ -0.14
RFFL-210ENST00000582308 MLECQ14165 292 aa14.15□□□□□ -0.14
RFFL-210ENST00000582308 CFAP65Q6ZU64 1925 aaKnown RBP14.13□□□□□ -0.15
RFFL-210ENST00000582308 FAM135AQ9P2D6 1515 aa14.13□□□□□ -0.15
RFFL-210ENST00000582308 KANK1Q14678 1352 aa14.12□□□□□ -0.15
RFFL-210ENST00000582308 ABCC3O15438 1527 aa14.11□□□□□ -0.15
RFFL-210ENST00000582308 CLTCQ00610 1675 aaKnown RBP14.11□□□□□ -0.15
RFFL-210ENST00000582308 MPHOSPH9Q99550 1183 aa14.11□□□□□ -0.15
RFFL-210ENST00000582308 PPP6R1Q9UPN7 881 aa14.11□□□□□ -0.15
RFFL-210ENST00000582308 TET3O43151 1660 aa14.1□□□□□ -0.15
RFFL-210ENST00000582308 ZC3H13Q5T200 1668 aaKnown RBP14.1□□□□□ -0.15
RFFL-210ENST00000582308 FER1L4A9Z1Z3 1794 aa14.1□□□□□ -0.15
RFFL-210ENST00000582308 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
RFFL-210ENST00000582308 ADAMTSL3P82987 1691 aa14.1□□□□□ -0.15
RFFL-210ENST00000582308 WASHC2CQ9Y4E1 1318 aa14.1□□□□□ -0.15
RFFL-210ENST00000582308 LMTK2Q8IWU2 1503 aa14.1□□□□□ -0.15
RFFL-210ENST00000582308 DHX57Q6P158 1386 aaKnown RBP14.09□□□□□ -0.15
RFFL-210ENST00000582308 E9PCH4 1651 aa14.09□□□□□ -0.15
RFFL-210ENST00000582308 CAMSAP1Q5T5Y3 1602 aa14.08□□□□□ -0.15
RFFL-210ENST00000582308 EFCAB6Q5THR3 1501 aa14.07□□□□□ -0.16
RFFL-210ENST00000582308 PKD2Q13563 968 aa14.07□□□□□ -0.16
RFFL-210ENST00000582308 MADDQ8WXG6 1647 aa14.07□□□□□ -0.16
RFFL-210ENST00000582308 FOXD1Q16676 465 aa14.06□□□□□ -0.16
RFFL-210ENST00000582308 MROH2AA6NES4 1674 aa14.06□□□□□ -0.16
RFFL-210ENST00000582308 RIMS1Q86UR5 1692 aaKnown RBP14.04□□□□□ -0.16
RFFL-210ENST00000582308 ESF1Q9H501 851 aaKnown RBP14.04□□□□□ -0.16
RFFL-210ENST00000582308 CNTLNQ9NXG0 1405 aa14.04□□□□□ -0.16
RFFL-210ENST00000582308 ZMYM3Q14202 1370 aa14.03□□□□□ -0.16
RFFL-210ENST00000582308 NPATQ14207 1427 aa14.03□□□□□ -0.16
RFFL-210ENST00000582308 ARHGAP31Q2M1Z3 1444 aa14.03□□□□□ -0.16
RFFL-210ENST00000582308 C3P01024 1663 aa14.03□□□□□ -0.16
RFFL-210ENST00000582308 SPHKAPQ2M3C7 1700 aa14.01□□□□□ -0.17
RFFL-210ENST00000582308 RPRD2Q5VT52 1461 aaKnown RBP14.01□□□□□ -0.17
RFFL-210ENST00000582308 CCER1Q8TC90 406 aaPredicted RBP14.01□□□□□ -0.17
RFFL-210ENST00000582308 PREX1Q8TCU6 1659 aa14.01□□□□□ -0.17
RFFL-210ENST00000582308 PLA2R1Q13018 1463 aa14□□□□□ -0.17
RFFL-210ENST00000582308 ANKRD30BQ9BXX2 1392 aa14□□□□□ -0.17
RFFL-210ENST00000582308 KDM4FA0A1W2PPD8 638 aa13.99□□□□□ -0.17
RFFL-210ENST00000582308 FBXO31Q5XUX0 539 aaPredicted RBP13.99□□□□□ -0.17
RFFL-210ENST00000582308 PTPRTO14522 1441 aa13.98□□□□□ -0.17
RFFL-210ENST00000582308 CEBPAP49715 358 aaPredicted RBP13.98□□□□□ -0.17
RFFL-210ENST00000582308 NOS1P29475 1434 aa13.98□□□□□ -0.17
RFFL-210ENST00000582308 ERVK-7P63135 1459 aa13.97□□□□□ -0.17
RFFL-210ENST00000582308 SYNMO15061 1565 aa13.96□□□□□ -0.17
RFFL-210ENST00000582308 SETD1BQ9UPS6 1966 aaKnown RBP13.96□□□□□ -0.18
RFFL-210ENST00000582308 SPATA31D1Q6ZQQ2 1576 aa13.96□□□□□ -0.18
RFFL-210ENST00000582308 TRPM2O94759 1503 aa13.95□□□□□ -0.18
RFFL-210ENST00000582308 PTPRMP28827 1452 aa13.95□□□□□ -0.18
RFFL-210ENST00000582308 CLSPNQ9HAW4 1339 aa13.94□□□□□ -0.18
RFFL-210ENST00000582308 PLPPR3Q6T4P5 718 aa13.94□□□□□ -0.18
RFFL-210ENST00000582308 SIN3AQ96ST3 1273 aa13.94□□□□□ -0.18
RFFL-210ENST00000582308 CLTCL1P53675 1640 aa13.93□□□□□ -0.18
RFFL-210ENST00000582308 UGGT1Q9NYU2 1555 aa13.93□□□□□ -0.18
RFFL-210ENST00000582308 PIK3C2BO00750 1634 aa13.93□□□□□ -0.18
RFFL-210ENST00000582308 KIF1BO60333 1816 aa13.92□□□□□ -0.18
RFFL-210ENST00000582308 MYO5BQ9ULV0 1848 aa13.91□□□□□ -0.18
RFFL-210ENST00000582308 TNRQ92752 1358 aa13.91□□□□□ -0.18
RFFL-210ENST00000582308 CCDC144AA2RUR9 1427 aa13.9□□□□□ -0.18
RFFL-210ENST00000582308 NEUROD1Q13562 356 aa13.9□□□□□ -0.18
RFFL-210ENST00000582308 IDI1Q13907 227 aa13.9□□□□□ -0.18
RFFL-210ENST00000582308 SLC52A1Q9NWF4 448 aa13.89□□□□□ -0.19
RFFL-210ENST00000582308 TMEM131LA2VDJ0 1609 aa13.86□□□□□ -0.19
RFFL-210ENST00000582308 MYO3AQ8NEV4 1616 aa13.86□□□□□ -0.19
RFFL-210ENST00000582308 SPATA31E1Q6ZUB1 1445 aa13.85□□□□□ -0.19
RFFL-210ENST00000582308 NLRP1Q9C000 1473 aa13.85□□□□□ -0.19
RFFL-210ENST00000582308 UBR1Q8IWV7 1749 aa13.84□□□□□ -0.19
RFFL-210ENST00000582308 KDM5AP29375 1690 aaKnown RBP13.84□□□□□ -0.19
RFFL-210ENST00000582308 ADGRB3O60242 1522 aa13.84□□□□□ -0.19
RFFL-210ENST00000582308 NEURL4Q96JN8 1562 aa13.83□□□□□ -0.19
RFFL-210ENST00000582308 CHGAP10645 457 aaKnown RBP13.83□□□□□ -0.2
RFFL-210ENST00000582308 ZNF142P52746 1687 aaPredicted RBP13.82□□□□□ -0.2
RFFL-210ENST00000582308 RGL3Q3MIN7 710 aa13.82□□□□□ -0.2
RFFL-210ENST00000582308 A2ML1A8K2U0 1454 aa13.81□□□□□ -0.2
RFFL-210ENST00000582308 CEP170BQ9Y4F5 1589 aaPredicted RBP13.81□□□□□ -0.2
RFFL-210ENST00000582308 L3MBTL2Q969R5 705 aa13.8□□□□□ -0.2
RFFL-210ENST00000582308 IFT172Q9UG01 1749 aa13.8□□□□□ -0.2
RFFL-210ENST00000582308 PPLO60437 1756 aa13.79□□□□□ -0.2
RFFL-210ENST00000582308 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
RFFL-210ENST00000582308 UHRF1BP1Q6BDS2 1440 aa13.79□□□□□ -0.2
RFFL-210ENST00000582308 ZNF326Q5BKZ1 582 aaKnown RBP13.78□□□□□ -0.2
RFFL-210ENST00000582308 TONSLQ96HA7 1378 aa13.78□□□□□ -0.2
RFFL-210ENST00000582308 NEXMIFQ5QGS0 1516 aa13.77□□□□□ -0.21
RFFL-210ENST00000582308 TIMELESSQ9UNS1 1208 aa13.77□□□□□ -0.21
RFFL-210ENST00000582308 RPGRIP1LQ68CZ1 1315 aa13.75□□□□□ -0.21
RFFL-210ENST00000582308 THEMISQ8N1K5 641 aaPredicted RBP13.75□□□□□ -0.21
RFFL-210ENST00000582308 DCAF11Q8TEB1 546 aa13.75□□□□□ -0.21
RFFL-210ENST00000582308 KDM2AQ9Y2K7 1162 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms