RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 CLTCQ00610 1675 aaKnown RBP25.02■■□□□ 1.6
RNF43-206ENST00000582293 AEBP2Q6ZN18 517 aaPredicted RBP25.01■■□□□ 1.59
RNF43-206ENST00000582293 DEPDC5O75140 1603 aa25.01■■□□□ 1.59
RNF43-206ENST00000582293 MROH2AA6NES4 1674 aa25■■□□□ 1.59
RNF43-206ENST00000582293 C3P01024 1663 aa24.99■■□□□ 1.59
RNF43-206ENST00000582293 ANKRD50Q9ULJ7 1429 aa24.99■■□□□ 1.59
RNF43-206ENST00000582293 CNTLNQ9NXG0 1405 aa24.98■■□□□ 1.59
RNF43-206ENST00000582293 PRDM15P57071 1507 aaPredicted RBP24.97■■□□□ 1.59
RNF43-206ENST00000582293 CEBPAP49715 358 aaPredicted RBP24.97■■□□□ 1.59
RNF43-206ENST00000582293 PPP6R1Q9UPN7 881 aa24.97■■□□□ 1.59
RNF43-206ENST00000582293 KDM5DQ9BY66 1539 aa24.96■■□□□ 1.59
RNF43-206ENST00000582293 FAM135AQ9P2D6 1515 aa24.96■■□□□ 1.59
RNF43-206ENST00000582293 ABCC3O15438 1527 aa24.94■■□□□ 1.58
RNF43-206ENST00000582293 ZMYM3Q14202 1370 aa24.93■■□□□ 1.58
RNF43-206ENST00000582293 NAIPQ13075 1403 aa24.93■■□□□ 1.58
RNF43-206ENST00000582293 VWDEQ8N2E2 1590 aa24.93■■□□□ 1.58
RNF43-206ENST00000582293 GCC2Q8IWJ2 1684 aa24.91■■□□□ 1.58
RNF43-206ENST00000582293 PLPPR3Q6T4P5 718 aa24.91■■□□□ 1.58
RNF43-206ENST00000582293 ESF1Q9H501 851 aaKnown RBP24.91■■□□□ 1.58
RNF43-206ENST00000582293 CEP152O94986 1710 aa24.91■■□□□ 1.58
RNF43-206ENST00000582293 ZC3H13Q5T200 1668 aaKnown RBP24.91■■□□□ 1.58
RNF43-206ENST00000582293 UNC13BO14795 1591 aa24.88■■□□□ 1.57
RNF43-206ENST00000582293 WASHC2CQ9Y4E1 1318 aa24.88■■□□□ 1.57
RNF43-206ENST00000582293 HFM1A2PYH4 1435 aa24.88■■□□□ 1.57
RNF43-206ENST00000582293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.85■■□□□ 1.57
RNF43-206ENST00000582293 CAMSAP1Q5T5Y3 1602 aa24.85■■□□□ 1.57
RNF43-206ENST00000582293 LMTK2Q8IWU2 1503 aa24.85■■□□□ 1.57
RNF43-206ENST00000582293 PZPP20742 1482 aa24.83■■□□□ 1.57
RNF43-206ENST00000582293 NPATQ14207 1427 aa24.81■■□□□ 1.56
RNF43-206ENST00000582293 LMTK3Q96Q04 1460 aa24.8■■□□□ 1.56
RNF43-206ENST00000582293 FBXO31Q5XUX0 539 aaPredicted RBP24.79■■□□□ 1.56
RNF43-206ENST00000582293 KANK1Q14678 1352 aa24.79■■□□□ 1.56
RNF43-206ENST00000582293 IQGAP3Q86VI3 1631 aa24.78■■□□□ 1.56
RNF43-206ENST00000582293 PREX1Q8TCU6 1659 aa24.78■■□□□ 1.56
RNF43-206ENST00000582293 ARHGAP31Q2M1Z3 1444 aa24.78■■□□□ 1.56
RNF43-206ENST00000582293 EFCAB6Q5THR3 1501 aa24.76■■□□□ 1.55
RNF43-206ENST00000582293 SPATA31D1Q6ZQQ2 1576 aa24.74■■□□□ 1.55
RNF43-206ENST00000582293 SETD1BQ9UPS6 1966 aaKnown RBP24.74■■□□□ 1.55
RNF43-206ENST00000582293 TET3O43151 1660 aa24.73■■□□□ 1.55
RNF43-206ENST00000582293 MYO3AQ8NEV4 1616 aa24.73■■□□□ 1.55
RNF43-206ENST00000582293 ERVK-7P63135 1459 aa24.73■■□□□ 1.55
RNF43-206ENST00000582293 NUP155O75694 1391 aa24.72■■□□□ 1.55
RNF43-206ENST00000582293 UHRF1BP1Q6BDS2 1440 aa24.69■■□□□ 1.54
RNF43-206ENST00000582293 TNRQ92752 1358 aa24.69■■□□□ 1.54
RNF43-206ENST00000582293 CFAP65Q6ZU64 1925 aaKnown RBP24.68■■□□□ 1.54
RNF43-206ENST00000582293 E9PCH4 1651 aa24.68■■□□□ 1.54
RNF43-206ENST00000582293 ZNF142P52746 1687 aaPredicted RBP24.67■■□□□ 1.54
RNF43-206ENST00000582293 SETD5Q9C0A6 1442 aa24.67■■□□□ 1.54
RNF43-206ENST00000582293 RPRD2Q5VT52 1461 aaKnown RBP24.64■■□□□ 1.54
RNF43-206ENST00000582293 SYNMO15061 1565 aa24.64■■□□□ 1.54
RNF43-206ENST00000582293 CEP170BQ9Y4F5 1589 aaPredicted RBP24.64■■□□□ 1.54
RNF43-206ENST00000582293 NOS1P29475 1434 aa24.64■■□□□ 1.54
RNF43-206ENST00000582293 HSPA2P54652 639 aa24.64■■□□□ 1.54
RNF43-206ENST00000582293 RAB3GAP2Q9H2M9 1393 aa24.62■■□□□ 1.53
RNF43-206ENST00000582293 A2ML1A8K2U0 1454 aa24.61■■□□□ 1.53
RNF43-206ENST00000582293 NLRP1Q9C000 1473 aa24.6■■□□□ 1.53
RNF43-206ENST00000582293 TRIM52Q96A61 297 aa24.58■■□□□ 1.53
RNF43-206ENST00000582293 PIK3C2BO00750 1634 aa24.53■■□□□ 1.52
RNF43-206ENST00000582293 STRCQ7RTU9 1775 aa24.53■■□□□ 1.52
RNF43-206ENST00000582293 UGGT1Q9NYU2 1555 aa24.53■■□□□ 1.52
RNF43-206ENST00000582293 UBR1Q8IWV7 1749 aa24.52■■□□□ 1.52
RNF43-206ENST00000582293 PTPRTO14522 1441 aa24.52■■□□□ 1.52
RNF43-206ENST00000582293 IDI1Q13907 227 aa24.51■■□□□ 1.51
RNF43-206ENST00000582293 SPHKAPQ2M3C7 1700 aa24.5■■□□□ 1.51
RNF43-206ENST00000582293 PLA2R1Q13018 1463 aa24.5■■□□□ 1.51
RNF43-206ENST00000582293 TRIM26Q12899 539 aaPredicted RBP24.49■■□□□ 1.51
RNF43-206ENST00000582293 PKD2Q13563 968 aa24.49■■□□□ 1.51
RNF43-206ENST00000582293 SLC4A1APQ9BWU0 796 aaKnown RBP24.49■■□□□ 1.51
RNF43-206ENST00000582293 MPHOSPH9Q99550 1183 aa24.48■■□□□ 1.51
RNF43-206ENST00000582293 HRCP23327 699 aa24.47■■□□□ 1.51
RNF43-206ENST00000582293 KDM5AP29375 1690 aaKnown RBP24.46■■□□□ 1.51
RNF43-206ENST00000582293 SLC52A1Q9NWF4 448 aa24.45■■□□□ 1.5
RNF43-206ENST00000582293 TRPM2O94759 1503 aa24.45■■□□□ 1.5
RNF43-206ENST00000582293 FOXD1Q16676 465 aa24.44■■□□□ 1.5
RNF43-206ENST00000582293 ADGRB3O60242 1522 aa24.44■■□□□ 1.5
RNF43-206ENST00000582293 ACIN1Q9UKV3 1341 aaKnown RBP24.43■■□□□ 1.5
RNF43-206ENST00000582293 TMEM131LA2VDJ0 1609 aa24.43■■□□□ 1.5
RNF43-206ENST00000582293 CLTCL1P53675 1640 aa24.42■■□□□ 1.5
RNF43-206ENST00000582293 ARHGAP23Q9P227 1491 aa24.41■■□□□ 1.5
RNF43-206ENST00000582293 THEMISQ8N1K5 641 aaPredicted RBP24.41■■□□□ 1.5
RNF43-206ENST00000582293 NCKAP5LQ9HCH0 1330 aa24.4■■□□□ 1.5
RNF43-206ENST00000582293 NEURL4Q96JN8 1562 aa24.4■■□□□ 1.5
RNF43-206ENST00000582293 SLIT1O75093 1534 aa24.4■■□□□ 1.5
RNF43-206ENST00000582293 MYO5BQ9ULV0 1848 aa24.4■■□□□ 1.5
RNF43-206ENST00000582293 POLR1AO95602 1720 aaPredicted RBP24.38■■□□□ 1.49
RNF43-206ENST00000582293 TMEM2Q9UHN6 1383 aa24.35■■□□□ 1.49
RNF43-206ENST00000582293 LTKP29376 864 aa24.32■■□□□ 1.48
RNF43-206ENST00000582293 MED14O60244 1454 aa24.32■■□□□ 1.48
RNF43-206ENST00000582293 ZFYVE9O95405 1425 aa24.31■■□□□ 1.48
RNF43-206ENST00000582293 STAG3Q9UJ98 1225 aa24.31■■□□□ 1.48
RNF43-206ENST00000582293 ANKLE2Q86XL3 938 aa24.29■■□□□ 1.48
RNF43-206ENST00000582293 SCAF11Q99590 1463 aaKnown RBP24.29■■□□□ 1.48
RNF43-206ENST00000582293 CHGAP10645 457 aaKnown RBP24.27■■□□□ 1.48
RNF43-206ENST00000582293 ANKRD30BQ9BXX2 1392 aa24.27■■□□□ 1.48
RNF43-206ENST00000582293 KIF1BO60333 1816 aa24.26■■□□□ 1.47
RNF43-206ENST00000582293 NPHP4O75161 1426 aaPredicted RBP24.26■■□□□ 1.47
RNF43-206ENST00000582293 RIMS2Q9UQ26 1411 aa24.26■■□□□ 1.47
RNF43-206ENST00000582293 TXNDC2Q86VQ3 553 aa24.25■■□□□ 1.47
RNF43-206ENST00000582293 DMRT2Q9Y5R5 561 aa24.25■■□□□ 1.47
RNF43-206ENST00000582293 IQGAP1P46940 1657 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms