RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 PRG4Q92954 1404 aaPredicted RBP13.49□□□□□ -0.25
SRSF1-203ENST00000581497 ARSIQ5FYB1 569 aa13.49□□□□□ -0.25
SRSF1-203ENST00000581497 SHROOM2Q13796 1616 aa13.49□□□□□ -0.25
SRSF1-203ENST00000581497 MYT1LQ9UL68 1186 aa13.48□□□□□ -0.25
SRSF1-203ENST00000581497 STK24Q9Y6E0 443 aa13.47□□□□□ -0.25
SRSF1-203ENST00000581497 CARMIL1Q5VZK9 1371 aa13.44□□□□□ -0.26
SRSF1-203ENST00000581497 KIAA0586Q9BVV6 1533 aa13.44□□□□□ -0.26
SRSF1-203ENST00000581497 MFRPQ9BY79 579 aa13.43□□□□□ -0.26
SRSF1-203ENST00000581497 KHSRPQ92945 711 aaKnown RBP eCLIP13.42□□□□□ -0.267e-46■■■□□ 19.1
SRSF1-203ENST00000581497 CUL7Q14999 1698 aa13.42□□□□□ -0.26
SRSF1-203ENST00000581497 RUSC2Q8N2Y8 1516 aa13.42□□□□□ -0.26
SRSF1-203ENST00000581497 ZNF316A6NFI3 1004 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-203ENST00000581497 STK25O00506 426 aa13.4□□□□□ -0.26
SRSF1-203ENST00000581497 PTGER2P43116 358 aa13.4□□□□□ -0.26
SRSF1-203ENST00000581497 KIF3CO14782 793 aa13.37□□□□□ -0.27
SRSF1-203ENST00000581497 C2orf72A6NCS6 295 aa13.36□□□□□ -0.27
SRSF1-203ENST00000581497 ANKRD13DQ6ZTN6 518 aa13.36□□□□□ -0.27
SRSF1-203ENST00000581497 ECM2O94769 699 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-203ENST00000581497 CARMIL2Q6F5E8 1435 aa13.32□□□□□ -0.28
SRSF1-203ENST00000581497 PTPRGP23470 1445 aa13.31□□□□□ -0.28
SRSF1-203ENST00000581497 NUDT7P0C024 238 aa13.31□□□□□ -0.28
SRSF1-203ENST00000581497 LSM11P83369 360 aaKnown RBP eCLIP13.31□□□□□ -0.284e-12■□□□□ 9.4
SRSF1-203ENST00000581497 RAPGEF2Q9Y4G8 1499 aa13.3□□□□□ -0.28
SRSF1-203ENST00000581497 TNIKQ9UKE5 1360 aa13.3□□□□□ -0.28
SRSF1-203ENST00000581497 FAM69CQ0P6D2 419 aa13.28□□□□□ -0.28
SRSF1-203ENST00000581497 IQGAP2Q13576 1575 aa13.28□□□□□ -0.28
SRSF1-203ENST00000581497 TTBK1Q5TCY1 1321 aaPredicted RBP13.27□□□□□ -0.29
SRSF1-203ENST00000581497 MAPKBP1O60336 1514 aa13.26□□□□□ -0.29
SRSF1-203ENST00000581497 SLC34A2O95436 690 aa13.26□□□□□ -0.29
SRSF1-203ENST00000581497 PBX2P40425 430 aa13.26□□□□□ -0.29
SRSF1-203ENST00000581497 ABCC10Q5T3U5 1492 aa13.26□□□□□ -0.29
SRSF1-203ENST00000581497 TMC2Q8TDI7 906 aa13.26□□□□□ -0.29
SRSF1-203ENST00000581497 PCDHGA4Q9Y5G9 962 aa13.26□□□□□ -0.29
SRSF1-203ENST00000581497 ADCY10Q96PN6 1610 aa13.25□□□□□ -0.29
SRSF1-203ENST00000581497 LHX6Q9UPM6 363 aa13.25□□□□□ -0.29
SRSF1-203ENST00000581497 RGL2O15211 777 aa13.24□□□□□ -0.29
SRSF1-203ENST00000581497 PKD2Q13563 968 aa13.21□□□□□ -0.29
SRSF1-203ENST00000581497 DISP1Q96F81 1524 aa13.21□□□□□ -0.29
SRSF1-203ENST00000581497 UGGT2Q9NYU1 1516 aa13.21□□□□□ -0.29
SRSF1-203ENST00000581497 ABCC2Q92887 1545 aa13.2□□□□□ -0.3
SRSF1-203ENST00000581497 POTEEQ6S8J3 1075 aa13.2□□□□□ -0.3
SRSF1-203ENST00000581497 UACAQ9BZF9 1416 aa13.2□□□□□ -0.3
SRSF1-203ENST00000581497 UHRF1BP1LA0JNW5 1464 aa13.19□□□□□ -0.3
SRSF1-203ENST00000581497 AXIN2Q9Y2T1 843 aa13.19□□□□□ -0.3
SRSF1-203ENST00000581497 KIF13AQ9H1H9 1805 aa13.18□□□□□ -0.3
SRSF1-203ENST00000581497 PRXQ9BXM0 1461 aa13.18□□□□□ -0.3
SRSF1-203ENST00000581497 DIP2BQ9P265 1576 aa13.18□□□□□ -0.3
SRSF1-203ENST00000581497 PLB1Q6P1J6 1458 aa13.16□□□□□ -0.3
SRSF1-203ENST00000581497 PPP1R37O75864 691 aa13.16□□□□□ -0.3
SRSF1-203ENST00000581497 GOLGA3Q08378 1498 aa13.15□□□□□ -0.3
SRSF1-203ENST00000581497 ASXL2Q76L83 1435 aa13.14□□□□□ -0.31
SRSF1-203ENST00000581497 KIAA0556O60303 1618 aa13.14□□□□□ -0.31
SRSF1-203ENST00000581497 KDM5BQ9UGL1 1544 aa13.12□□□□□ -0.31
SRSF1-203ENST00000581497 PSDA5PKW4 1024 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-203ENST00000581497 FAM9AQ8IZU1 332 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-203ENST00000581497 EEA1Q15075 1411 aa13.1□□□□□ -0.31
SRSF1-203ENST00000581497 ARHGAP33O14559 1287 aa13.09□□□□□ -0.31
SRSF1-203ENST00000581497 CTTNBP2Q8WZ74 1663 aa13.08□□□□□ -0.31
SRSF1-203ENST00000581497 ADGRD1Q6QNK2 874 aa13.08□□□□□ -0.32
SRSF1-203ENST00000581497 GLI2P10070 1586 aa13.07□□□□□ -0.32
SRSF1-203ENST00000581497 PTCD2Q8WV60 388 aaKnown RBP13.07□□□□□ -0.32
SRSF1-203ENST00000581497 KDM4FA0A1W2PPD8 638 aa13.06□□□□□ -0.32
SRSF1-203ENST00000581497 EPRSP07814 1512 aaKnown RBP13.06□□□□□ -0.32
SRSF1-203ENST00000581497 KDM6BO15054 1643 aa13.06□□□□□ -0.32
SRSF1-203ENST00000581497 HCSTQ9UBK5 93 aa13.05□□□□□ -0.32
SRSF1-203ENST00000581497 FOXK1P85037 733 aa13.04□□□□□ -0.32
SRSF1-203ENST00000581497 P3H3Q8IVL6 736 aa13.04□□□□□ -0.32
SRSF1-203ENST00000581497 WDR7Q9Y4E6 1490 aa13.04□□□□□ -0.32
SRSF1-203ENST00000581497 ZCCHC11Q5TAX3 1644 aaKnown RBP13.03□□□□□ -0.32
SRSF1-203ENST00000581497 PLPP6Q8IY26 295 aa13.03□□□□□ -0.32
SRSF1-203ENST00000581497 ABCA8O94911 1581 aa13.03□□□□□ -0.32
SRSF1-203ENST00000581497 PLA2G2EQ9NZK7 142 aa13.02□□□□□ -0.33
SRSF1-203ENST00000581497 TSPOAP1O95153 1857 aa13.02□□□□□ -0.33
SRSF1-203ENST00000581497 TEX14Q8IWB6 1497 aa13.01□□□□□ -0.33
SRSF1-203ENST00000581497 TK2O00142 265 aa13□□□□□ -0.33
SRSF1-203ENST00000581497 KCNH8Q96L42 1107 aa13□□□□□ -0.33
SRSF1-203ENST00000581497 GPHNQ9NQX3 736 aaPredicted RBP13□□□□□ -0.33
SRSF1-203ENST00000581497 PSEN2P49810 448 aa12.99□□□□□ -0.33
SRSF1-203ENST00000581497 DMRTA1Q5VZB9 504 aa12.99□□□□□ -0.33
SRSF1-203ENST00000581497 PPP4R3BQ5MIZ7 849 aa12.98□□□□□ -0.33
SRSF1-203ENST00000581497 HS6ST3Q8IZP7 471 aa12.98□□□□□ -0.33
SRSF1-203ENST00000581497 DSG2Q14126 1118 aa12.97□□□□□ -0.33
SRSF1-203ENST00000581497 MAP3K4Q9Y6R4 1608 aa12.97□□□□□ -0.33
SRSF1-203ENST00000581497 CD109Q6YHK3 1445 aa12.96□□□□□ -0.33
SRSF1-203ENST00000581497 PPRC1Q5VV67 1664 aaKnown RBP12.96□□□□□ -0.33
SRSF1-203ENST00000581497 ARID3CA6NKF2 412 aa12.96□□□□□ -0.33
SRSF1-203ENST00000581497 HRO43593 1189 aa12.96□□□□□ -0.33
SRSF1-203ENST00000581497 TBC1D12O60347 775 aa12.96□□□□□ -0.33
SRSF1-203ENST00000581497 RANGAP1P46060 587 aaPredicted RBP12.96□□□□□ -0.33
SRSF1-203ENST00000581497 SAMD9Q5K651 1589 aa12.95□□□□□ -0.34
SRSF1-203ENST00000581497 ATP10BO94823 1461 aa12.95□□□□□ -0.34
SRSF1-203ENST00000581497 COL17A1Q9UMD9 1497 aaPredicted RBP12.94□□□□□ -0.34
SRSF1-203ENST00000581497 MAGI3Q5TCQ9 1506 aa12.93□□□□□ -0.34
SRSF1-203ENST00000581497 KIF21BO75037 1637 aa12.91□□□□□ -0.34
SRSF1-203ENST00000581497 FHOD3Q2V2M9 1422 aa12.91□□□□□ -0.34
SRSF1-203ENST00000581497 UBTFP17480 764 aaKnown RBP12.9□□□□□ -0.34
SRSF1-203ENST00000581497 RAPGEF6Q8TEU7 1601 aa12.89□□□□□ -0.35
SRSF1-203ENST00000581497 CFAP43Q8NDM7 1665 aa12.89□□□□□ -0.35
SRSF1-203ENST00000581497 KCTD12Q96CX2 325 aaKnown RBP12.88□□□□□ -0.35
SRSF1-203ENST00000581497 STAC3Q96MF2 364 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms