RNA–Protein interactions for RNA: ENST00000581438.5

ATG13-228, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-228ENST00000581438 CLTCQ00610 1675 aaKnown RBP26.79■■□□□ 1.88
ATG13-228ENST00000581438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.78■■□□□ 1.88
ATG13-228ENST00000581438 SETD1BQ9UPS6 1966 aaKnown RBP26.77■■□□□ 1.88
ATG13-228ENST00000581438 NCOA1Q15788 1441 aa26.76■■□□□ 1.87
ATG13-228ENST00000581438 ERBINQ96RT1 1412 aa26.76■■□□□ 1.87
ATG13-228ENST00000581438 WASHC2CQ9Y4E1 1318 aa26.76■■□□□ 1.87
ATG13-228ENST00000581438 ADGRL2O95490 1459 aa26.75■■□□□ 1.87
ATG13-228ENST00000581438 LMTK3Q96Q04 1460 aa26.75■■□□□ 1.87
ATG13-228ENST00000581438 KDM5DQ9BY66 1539 aa26.74■■□□□ 1.87
ATG13-228ENST00000581438 RNF17Q9BXT8 1623 aaKnown RBP26.73■■□□□ 1.87
ATG13-228ENST00000581438 NPATQ14207 1427 aa26.73■■□□□ 1.87
ATG13-228ENST00000581438 PREX1Q8TCU6 1659 aa26.72■■□□□ 1.87
ATG13-228ENST00000581438 UHRF1BP1Q6BDS2 1440 aa26.71■■□□□ 1.87
ATG13-228ENST00000581438 RRBP1Q9P2E9 1410 aaKnown RBP26.69■■□□□ 1.86
ATG13-228ENST00000581438 ITGAEP38570 1179 aa26.66■■□□□ 1.86
ATG13-228ENST00000581438 PTPRKQ15262 1439 aa26.65■■□□□ 1.86
ATG13-228ENST00000581438 ROCK1Q13464 1354 aa26.65■■□□□ 1.86
ATG13-228ENST00000581438 ZC3H13Q5T200 1668 aaKnown RBP26.64■■□□□ 1.86
ATG13-228ENST00000581438 HSPA2P54652 639 aa26.64■■□□□ 1.86
ATG13-228ENST00000581438 KANK1Q14678 1352 aa26.63■■□□□ 1.85
ATG13-228ENST00000581438 ANKRD50Q9ULJ7 1429 aa26.63■■□□□ 1.85
ATG13-228ENST00000581438 ABCC3O15438 1527 aa26.62■■□□□ 1.85
ATG13-228ENST00000581438 PZPP20742 1482 aa26.62■■□□□ 1.85
ATG13-228ENST00000581438 MROH1Q8NDA8 1641 aa26.61■■□□□ 1.85
ATG13-228ENST00000581438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.61■■□□□ 1.85
ATG13-228ENST00000581438 PRDM15P57071 1507 aaPredicted RBP26.6■■□□□ 1.85
ATG13-228ENST00000581438 DEPDC5O75140 1603 aa26.58■■□□□ 1.85
ATG13-228ENST00000581438 FBXO31Q5XUX0 539 aaPredicted RBP26.55■■□□□ 1.84
ATG13-228ENST00000581438 TNRQ92752 1358 aa26.55■■□□□ 1.84
ATG13-228ENST00000581438 CEP152O94986 1710 aa26.53■■□□□ 1.84
ATG13-228ENST00000581438 CAMSAP1Q5T5Y3 1602 aa26.51■■□□□ 1.83
ATG13-228ENST00000581438 MYO3AQ8NEV4 1616 aa26.51■■□□□ 1.83
ATG13-228ENST00000581438 ARHGAP31Q2M1Z3 1444 aa26.49■■□□□ 1.83
ATG13-228ENST00000581438 VWDEQ8N2E2 1590 aa26.48■■□□□ 1.83
ATG13-228ENST00000581438 LMTK2Q8IWU2 1503 aa26.48■■□□□ 1.83
ATG13-228ENST00000581438 CEP170BQ9Y4F5 1589 aaPredicted RBP26.47■■□□□ 1.83
ATG13-228ENST00000581438 ZNF142P52746 1687 aaPredicted RBP26.47■■□□□ 1.83
ATG13-228ENST00000581438 DMRT2Q9Y5R5 561 aa26.46■■□□□ 1.83
ATG13-228ENST00000581438 A2ML1A8K2U0 1454 aa26.46■■□□□ 1.83
ATG13-228ENST00000581438 SPATA31D1Q6ZQQ2 1576 aa26.46■■□□□ 1.83
ATG13-228ENST00000581438 ERVK-7P63135 1459 aa26.45■■□□□ 1.82
ATG13-228ENST00000581438 NLRP1Q9C000 1473 aa26.44■■□□□ 1.82
ATG13-228ENST00000581438 UNC13BO14795 1591 aa26.41■■□□□ 1.82
ATG13-228ENST00000581438 CFAP65Q6ZU64 1925 aaKnown RBP26.39■■□□□ 1.82
ATG13-228ENST00000581438 PLA2R1Q13018 1463 aa26.38■■□□□ 1.81
ATG13-228ENST00000581438 EFCAB6Q5THR3 1501 aa26.38■■□□□ 1.81
ATG13-228ENST00000581438 THEMISQ8N1K5 641 aaPredicted RBP26.37■■□□□ 1.81
ATG13-228ENST00000581438 STRCQ7RTU9 1775 aa26.37■■□□□ 1.81
ATG13-228ENST00000581438 NAIPQ13075 1403 aa26.37■■□□□ 1.81
ATG13-228ENST00000581438 NUP155O75694 1391 aa26.36■■□□□ 1.81
ATG13-228ENST00000581438 PKD2Q13563 968 aa26.36■■□□□ 1.81
ATG13-228ENST00000581438 RPRD2Q5VT52 1461 aaKnown RBP26.35■■□□□ 1.81
ATG13-228ENST00000581438 UGGT1Q9NYU2 1555 aa26.34■■□□□ 1.81
ATG13-228ENST00000581438 HFM1A2PYH4 1435 aa26.34■■□□□ 1.81
ATG13-228ENST00000581438 TET3O43151 1660 aa26.34■■□□□ 1.81
ATG13-228ENST00000581438 GCC2Q8IWJ2 1684 aa26.33■■□□□ 1.81
ATG13-228ENST00000581438 PTPRTO14522 1441 aa26.32■■□□□ 1.8
ATG13-228ENST00000581438 IQGAP3Q86VI3 1631 aa26.32■■□□□ 1.8
ATG13-228ENST00000581438 NCKAP5LQ9HCH0 1330 aa26.3■■□□□ 1.8
ATG13-228ENST00000581438 NOS1P29475 1434 aa26.29■■□□□ 1.8
ATG13-228ENST00000581438 ANKLE2Q86XL3 938 aa26.27■■□□□ 1.8
ATG13-228ENST00000581438 SLC52A1Q9NWF4 448 aa26.27■■□□□ 1.8
ATG13-228ENST00000581438 STAG3Q9UJ98 1225 aa26.26■■□□□ 1.79
ATG13-228ENST00000581438 IDI1Q13907 227 aa26.23■■□□□ 1.79
ATG13-228ENST00000581438 TRIM52Q96A61 297 aa26.22■■□□□ 1.79
ATG13-228ENST00000581438 SYNMO15061 1565 aa26.21■■□□□ 1.79
ATG13-228ENST00000581438 UBR1Q8IWV7 1749 aa26.21■■□□□ 1.79
ATG13-228ENST00000581438 E9PCH4 1651 aa26.21■■□□□ 1.79
ATG13-228ENST00000581438 PIK3C2BO00750 1634 aa26.19■■□□□ 1.78
ATG13-228ENST00000581438 POLR1AO95602 1720 aaPredicted RBP26.19■■□□□ 1.78
ATG13-228ENST00000581438 ACIN1Q9UKV3 1341 aaKnown RBP26.17■■□□□ 1.78
ATG13-228ENST00000581438 KDM5AP29375 1690 aaKnown RBP26.17■■□□□ 1.78
ATG13-228ENST00000581438 EID1Q9Y6B2 187 aa26.15■■□□□ 1.78
ATG13-228ENST00000581438 SLIT1O75093 1534 aa26.14■■□□□ 1.77
ATG13-228ENST00000581438 NEURL4Q96JN8 1562 aa26.12■■□□□ 1.77
ATG13-228ENST00000581438 MED14O60244 1454 aa26.12■■□□□ 1.77
ATG13-228ENST00000581438 ARHGAP23Q9P227 1491 aa26.12■■□□□ 1.77
ATG13-228ENST00000581438 TMEM2Q9UHN6 1383 aa26.12■■□□□ 1.77
ATG13-228ENST00000581438 TXNDC2Q86VQ3 553 aa26.12■■□□□ 1.77
ATG13-228ENST00000581438 ADGRB3O60242 1522 aa26.12■■□□□ 1.77
ATG13-228ENST00000581438 NPHP4O75161 1426 aaPredicted RBP26.12■■□□□ 1.77
ATG13-228ENST00000581438 SLC4A1APQ9BWU0 796 aaKnown RBP26.11■■□□□ 1.77
ATG13-228ENST00000581438 SETD5Q9C0A6 1442 aa26.11■■□□□ 1.77
ATG13-228ENST00000581438 SCAF11Q99590 1463 aaKnown RBP26.11■■□□□ 1.77
ATG13-228ENST00000581438 CERKQ8TCT0 537 aa26.09■■□□□ 1.77
ATG13-228ENST00000581438 CHGAP10645 457 aaKnown RBP26.07■■□□□ 1.76
ATG13-228ENST00000581438 HDGFP51858 240 aaKnown RBP26.07■■□□□ 1.76
ATG13-228ENST00000581438 LTKP29376 864 aa26.06■■□□□ 1.76
ATG13-228ENST00000581438 SPHKAPQ2M3C7 1700 aa26.05■■□□□ 1.76
ATG13-228ENST00000581438 IQGAP1P46940 1657 aa26.05■■□□□ 1.76
ATG13-228ENST00000581438 ZNF335Q9H4Z2 1342 aaPredicted RBP26.03■■□□□ 1.76
ATG13-228ENST00000581438 TMEM131LA2VDJ0 1609 aa26.03■■□□□ 1.76
ATG13-228ENST00000581438 LTBP4Q8N2S1 1624 aa26.01■■□□□ 1.75
ATG13-228ENST00000581438 RAB3GAP2Q9H2M9 1393 aa25.99■■□□□ 1.75
ATG13-228ENST00000581438 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.99■■□□□ 1.75
ATG13-228ENST00000581438 FBXO41Q8TF61 875 aa25.99■■□□□ 1.75
ATG13-228ENST00000581438 MPHOSPH9Q99550 1183 aa25.99■■□□□ 1.75
ATG13-228ENST00000581438 TRPM2O94759 1503 aa25.98■■□□□ 1.75
ATG13-228ENST00000581438 RIMS2Q9UQ26 1411 aa25.97■■□□□ 1.75
ATG13-228ENST00000581438 PPP1R15AO75807 674 aaPredicted RBP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms