RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 EIF2AK4Q9P2K8 1649 aaKnown RBP20.3■□□□□ 0.84
CDK5RAP3-219ENST00000580670 SLC4A1APQ9BWU0 796 aaKnown RBP20.3■□□□□ 0.84
CDK5RAP3-219ENST00000580670 KDM5DQ9BY66 1539 aa20.3■□□□□ 0.84
CDK5RAP3-219ENST00000580670 KIF3BO15066 747 aa20.29■□□□□ 0.84
CDK5RAP3-219ENST00000580670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.29■□□□□ 0.842e-7■■□□□ 13.4
CDK5RAP3-219ENST00000580670 ATP10AO60312 1499 aa20.25■□□□□ 0.83
CDK5RAP3-219ENST00000580670 DEPDC5O75140 1603 aa20.25■□□□□ 0.83
CDK5RAP3-219ENST00000580670 FAM135AQ9P2D6 1515 aa20.24■□□□□ 0.83
CDK5RAP3-219ENST00000580670 IQGAP3Q86VI3 1631 aa20.23■□□□□ 0.83
CDK5RAP3-219ENST00000580670 ARHGEF40Q8TER5 1519 aa20.23■□□□□ 0.83
CDK5RAP3-219ENST00000580670 FOXD1Q16676 465 aa20.23■□□□□ 0.83
CDK5RAP3-219ENST00000580670 PKD2Q13563 968 aa20.22■□□□□ 0.83
CDK5RAP3-219ENST00000580670 BCORL1Q5H9F3 1711 aa20.22■□□□□ 0.83
CDK5RAP3-219ENST00000580670 RNF17Q9BXT8 1623 aaKnown RBP20.21■□□□□ 0.83
CDK5RAP3-219ENST00000580670 KANK1Q14678 1352 aa20.21■□□□□ 0.83
CDK5RAP3-219ENST00000580670 REREQ9P2R6 1566 aa20.2■□□□□ 0.82
CDK5RAP3-219ENST00000580670 MROH1Q8NDA8 1641 aa20.2■□□□□ 0.82
CDK5RAP3-219ENST00000580670 PRDM15P57071 1507 aaPredicted RBP20.2■□□□□ 0.82
CDK5RAP3-219ENST00000580670 GGT6Q6P531 493 aa20.18■□□□□ 0.82
CDK5RAP3-219ENST00000580670 SIN3AQ96ST3 1273 aa20.18■□□□□ 0.82
CDK5RAP3-219ENST00000580670 VWDEQ8N2E2 1590 aa20.17■□□□□ 0.82
CDK5RAP3-219ENST00000580670 NEUROD1Q13562 356 aa20.16■□□□□ 0.82
CDK5RAP3-219ENST00000580670 ANKRD30BQ9BXX2 1392 aa20.16■□□□□ 0.82
CDK5RAP3-219ENST00000580670 AGLP35573 1532 aa20.15■□□□□ 0.82
CDK5RAP3-219ENST00000580670 SIGLEC1Q9BZZ2 1709 aa20.12■□□□□ 0.81
CDK5RAP3-219ENST00000580670 TET3O43151 1660 aa20.12■□□□□ 0.81
CDK5RAP3-219ENST00000580670 CEP152O94986 1710 aa20.1■□□□□ 0.81
CDK5RAP3-219ENST00000580670 LMTK2Q8IWU2 1503 aa20.09■□□□□ 0.81
CDK5RAP3-219ENST00000580670 WASHC2CQ9Y4E1 1318 aa20.09■□□□□ 0.81
CDK5RAP3-219ENST00000580670 E9PCH4 1651 aa20.08■□□□□ 0.8
CDK5RAP3-219ENST00000580670 ABCC3O15438 1527 aa20.08■□□□□ 0.8
CDK5RAP3-219ENST00000580670 ARID4BQ4LE39 1312 aaPredicted RBP20.06■□□□□ 0.8
CDK5RAP3-219ENST00000580670 EFCAB6Q5THR3 1501 aa20.06■□□□□ 0.8
CDK5RAP3-219ENST00000580670 ZC3H13Q5T200 1668 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP3-219ENST00000580670 MLECQ14165 292 aa20.04■□□□□ 0.8
CDK5RAP3-219ENST00000580670 RPRD2Q5VT52 1461 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP3-219ENST00000580670 TIMELESSQ9UNS1 1208 aa20.03■□□□□ 0.8
CDK5RAP3-219ENST00000580670 PPP6R1Q9UPN7 881 aa20.03■□□□□ 0.8
CDK5RAP3-219ENST00000580670 TONSLQ96HA7 1378 aa20.03■□□□□ 0.8
CDK5RAP3-219ENST00000580670 PLA2R1Q13018 1463 aa20.02■□□□□ 0.8
CDK5RAP3-219ENST00000580670 CAMSAP1Q5T5Y3 1602 aa20.02■□□□□ 0.8
CDK5RAP3-219ENST00000580670 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
CDK5RAP3-219ENST00000580670 SPHKAPQ2M3C7 1700 aa19.99■□□□□ 0.79
CDK5RAP3-219ENST00000580670 PTPRTO14522 1441 aa19.99■□□□□ 0.79
CDK5RAP3-219ENST00000580670 NPATQ14207 1427 aa19.99■□□□□ 0.79
CDK5RAP3-219ENST00000580670 TRPM2O94759 1503 aa19.97■□□□□ 0.79
CDK5RAP3-219ENST00000580670 ARHGAP31Q2M1Z3 1444 aa19.96■□□□□ 0.79
CDK5RAP3-219ENST00000580670 CLTCQ00610 1675 aaKnown RBP19.96■□□□□ 0.79
CDK5RAP3-219ENST00000580670 ESF1Q9H501 851 aaKnown RBP19.95■□□□□ 0.78
CDK5RAP3-219ENST00000580670 CFAP65Q6ZU64 1925 aaKnown RBP19.94■□□□□ 0.78
CDK5RAP3-219ENST00000580670 L3MBTL2Q969R5 705 aa19.92■□□□□ 0.78
CDK5RAP3-219ENST00000580670 CLTCL1P53675 1640 aa19.91■□□□□ 0.78
CDK5RAP3-219ENST00000580670 PPP1R15AO75807 674 aaPredicted RBP19.9■□□□□ 0.78
CDK5RAP3-219ENST00000580670 CNTLNQ9NXG0 1405 aa19.9■□□□□ 0.78
CDK5RAP3-219ENST00000580670 NOS1P29475 1434 aa19.9■□□□□ 0.78
CDK5RAP3-219ENST00000580670 UGGT1Q9NYU2 1555 aa19.88■□□□□ 0.77
CDK5RAP3-219ENST00000580670 PREX1Q8TCU6 1659 aa19.88■□□□□ 0.77
CDK5RAP3-219ENST00000580670 ZMYM3Q14202 1370 aa19.87■□□□□ 0.77
CDK5RAP3-219ENST00000580670 FBXO31Q5XUX0 539 aaPredicted RBP19.86■□□□□ 0.77
CDK5RAP3-219ENST00000580670 SYNMO15061 1565 aa19.85■□□□□ 0.77
CDK5RAP3-219ENST00000580670 ERVK-7P63135 1459 aa19.85■□□□□ 0.77
CDK5RAP3-219ENST00000580670 RGL3Q3MIN7 710 aa19.85■□□□□ 0.77
CDK5RAP3-219ENST00000580670 SPATA31E1Q6ZUB1 1445 aa19.84■□□□□ 0.77
CDK5RAP3-219ENST00000580670 FER1L4A9Z1Z3 1794 aa19.84■□□□□ 0.77
CDK5RAP3-219ENST00000580670 MROH2AA6NES4 1674 aa19.84■□□□□ 0.77
CDK5RAP3-219ENST00000580670 KIF1BO60333 1816 aa19.82■□□□□ 0.76
CDK5RAP3-219ENST00000580670 SPATA31D1Q6ZQQ2 1576 aa19.81■□□□□ 0.76
CDK5RAP3-219ENST00000580670 PIK3C2BO00750 1634 aa19.8■□□□□ 0.76
CDK5RAP3-219ENST00000580670 DCAF11Q8TEB1 546 aa19.8■□□□□ 0.76
CDK5RAP3-219ENST00000580670 SLC52A1Q9NWF4 448 aa19.8■□□□□ 0.76
CDK5RAP3-219ENST00000580670 KDM2AQ9Y2K7 1162 aa19.79■□□□□ 0.76
CDK5RAP3-219ENST00000580670 NEURL4Q96JN8 1562 aa19.79■□□□□ 0.76
CDK5RAP3-219ENST00000580670 CHGAP10645 457 aaKnown RBP19.78■□□□□ 0.76
CDK5RAP3-219ENST00000580670 IDI1Q13907 227 aa19.78■□□□□ 0.76
CDK5RAP3-219ENST00000580670 MADDQ8WXG6 1647 aa19.77■□□□□ 0.76
CDK5RAP3-219ENST00000580670 ADGRB3O60242 1522 aa19.76■□□□□ 0.75
CDK5RAP3-219ENST00000580670 NBPF8Q3BBV2 869 aa19.76■□□□□ 0.75
CDK5RAP3-219ENST00000580670 ZNF326Q5BKZ1 582 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-219ENST00000580670 ADAMTSL3P82987 1691 aa19.76■□□□□ 0.75
CDK5RAP3-219ENST00000580670 CEBPAP49715 358 aaPredicted RBP19.75■□□□□ 0.75
CDK5RAP3-219ENST00000580670 C3P01024 1663 aa19.75■□□□□ 0.75
CDK5RAP3-219ENST00000580670 RIMS1Q86UR5 1692 aaKnown RBP19.74■□□□□ 0.75
CDK5RAP3-219ENST00000580670 TNRQ92752 1358 aa19.74■□□□□ 0.75
CDK5RAP3-219ENST00000580670 UHRF1BP1Q6BDS2 1440 aa19.73■□□□□ 0.75
CDK5RAP3-219ENST00000580670 PLPPR3Q6T4P5 718 aa19.72■□□□□ 0.75
CDK5RAP3-219ENST00000580670 PRAG1Q86YV5 1406 aa19.7■□□□□ 0.74
CDK5RAP3-219ENST00000580670 STAC3Q96MF2 364 aa19.7■□□□□ 0.74
CDK5RAP3-219ENST00000580670 TMEM131LA2VDJ0 1609 aa19.69■□□□□ 0.74
CDK5RAP3-219ENST00000580670 STAG3Q9UJ98 1225 aa19.69■□□□□ 0.74
CDK5RAP3-219ENST00000580670 RPGRIP1LQ68CZ1 1315 aa19.68■□□□□ 0.74
CDK5RAP3-219ENST00000580670 MYO5BQ9ULV0 1848 aa19.67■□□□□ 0.74
CDK5RAP3-219ENST00000580670 IFT172Q9UG01 1749 aa19.67■□□□□ 0.74
CDK5RAP3-219ENST00000580670 MYOM2P54296 1465 aa19.65■□□□□ 0.74
CDK5RAP3-219ENST00000580670 PPLO60437 1756 aa19.65■□□□□ 0.74
CDK5RAP3-219ENST00000580670 RALGAPBQ86X10 1494 aa19.65■□□□□ 0.74
CDK5RAP3-219ENST00000580670 A2ML1A8K2U0 1454 aa19.63■□□□□ 0.73
CDK5RAP3-219ENST00000580670 NLRP1Q9C000 1473 aa19.63■□□□□ 0.73
CDK5RAP3-219ENST00000580670 NEXMIFQ5QGS0 1516 aa19.63■□□□□ 0.73
CDK5RAP3-219ENST00000580670 ZNF316A6NFI3 1004 aaPredicted RBP19.62■□□□□ 0.73
CDK5RAP3-219ENST00000580670 TRPM1Q7Z4N2 1603 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms