RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 MROH1Q8NDA8 1641 aa23.76■■□□□ 1.39
CSNK1D-212ENST00000580061 ARID4BQ4LE39 1312 aaPredicted RBP23.74■■□□□ 1.39
CSNK1D-212ENST00000580061 PRDM15P57071 1507 aaPredicted RBP23.74■■□□□ 1.39
CSNK1D-212ENST00000580061 HRCP23327 699 aa23.73■■□□□ 1.39
CSNK1D-212ENST00000580061 GGT6Q6P531 493 aa23.7■■□□□ 1.38
CSNK1D-212ENST00000580061 ACIN1Q9UKV3 1341 aaKnown RBP23.68■■□□□ 1.38
CSNK1D-212ENST00000580061 VWDEQ8N2E2 1590 aa23.68■■□□□ 1.38
CSNK1D-212ENST00000580061 KDM5DQ9BY66 1539 aa23.68■■□□□ 1.38
CSNK1D-212ENST00000580061 IQGAP3Q86VI3 1631 aa23.67■■□□□ 1.38
CSNK1D-212ENST00000580061 MLECQ14165 292 aa23.67■■□□□ 1.38
CSNK1D-212ENST00000580061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.67■■□□□ 1.381e-20■□□□□ 9.1
CSNK1D-212ENST00000580061 CEP152O94986 1710 aa23.66■■□□□ 1.38
CSNK1D-212ENST00000580061 ZC3H13Q5T200 1668 aaKnown RBP23.66■■□□□ 1.38
CSNK1D-212ENST00000580061 NUP155O75694 1391 aa23.65■■□□□ 1.38
CSNK1D-212ENST00000580061 FAM135AQ9P2D6 1515 aa23.64■■□□□ 1.38
CSNK1D-212ENST00000580061 TRIM52Q96A61 297 aa23.64■■□□□ 1.37
CSNK1D-212ENST00000580061 KANK1Q14678 1352 aa23.64■■□□□ 1.37
CSNK1D-212ENST00000580061 FER1L4A9Z1Z3 1794 aa23.63■■□□□ 1.37
CSNK1D-212ENST00000580061 PPP6R1Q9UPN7 881 aa23.63■■□□□ 1.37
CSNK1D-212ENST00000580061 ADAMTSL3P82987 1691 aa23.63■■□□□ 1.37
CSNK1D-212ENST00000580061 CLTCQ00610 1675 aaKnown RBP23.62■■□□□ 1.37
CSNK1D-212ENST00000580061 ABCC3O15438 1527 aa23.62■■□□□ 1.37
CSNK1D-212ENST00000580061 LMTK2Q8IWU2 1503 aa23.61■■□□□ 1.37
CSNK1D-212ENST00000580061 PZPP20742 1482 aa23.61■■□□□ 1.37
CSNK1D-212ENST00000580061 TET3O43151 1660 aa23.59■■□□□ 1.37
CSNK1D-212ENST00000580061 MADDQ8WXG6 1647 aa23.59■■□□□ 1.37
CSNK1D-212ENST00000580061 WASHC2CQ9Y4E1 1318 aa23.59■■□□□ 1.37
CSNK1D-212ENST00000580061 CAMSAP1Q5T5Y3 1602 aa23.58■■□□□ 1.36
CSNK1D-212ENST00000580061 MROH2AA6NES4 1674 aa23.57■■□□□ 1.36
CSNK1D-212ENST00000580061 CNTLNQ9NXG0 1405 aa23.55■■□□□ 1.36
CSNK1D-212ENST00000580061 RIMS1Q86UR5 1692 aaKnown RBP23.54■■□□□ 1.36
CSNK1D-212ENST00000580061 EFCAB6Q5THR3 1501 aa23.54■■□□□ 1.36
CSNK1D-212ENST00000580061 ESF1Q9H501 851 aaKnown RBP23.54■■□□□ 1.36
CSNK1D-212ENST00000580061 MPHOSPH9Q99550 1183 aa23.53■■□□□ 1.36
CSNK1D-212ENST00000580061 SLC4A1APQ9BWU0 796 aaKnown RBP23.53■■□□□ 1.36
CSNK1D-212ENST00000580061 E9PCH4 1651 aa23.53■■□□□ 1.36
CSNK1D-212ENST00000580061 C3P01024 1663 aa23.49■■□□□ 1.35
CSNK1D-212ENST00000580061 ARHGAP31Q2M1Z3 1444 aa23.49■■□□□ 1.35
CSNK1D-212ENST00000580061 CFAP65Q6ZU64 1925 aaKnown RBP23.48■■□□□ 1.35
CSNK1D-212ENST00000580061 ZMYM3Q14202 1370 aa23.48■■□□□ 1.35
CSNK1D-212ENST00000580061 DHX57Q6P158 1386 aaKnown RBP23.47■■□□□ 1.35
CSNK1D-212ENST00000580061 NPATQ14207 1427 aa23.47■■□□□ 1.35
CSNK1D-212ENST00000580061 PKD2Q13563 968 aa23.46■■□□□ 1.35
CSNK1D-212ENST00000580061 RPRD2Q5VT52 1461 aaKnown RBP23.46■■□□□ 1.35
CSNK1D-212ENST00000580061 KDM4FA0A1W2PPD8 638 aa23.44■■□□□ 1.34
CSNK1D-212ENST00000580061 PREX1Q8TCU6 1659 aa23.44■■□□□ 1.34
CSNK1D-212ENST00000580061 SPHKAPQ2M3C7 1700 aa23.42■■□□□ 1.34
CSNK1D-212ENST00000580061 FOXD1Q16676 465 aa23.41■■□□□ 1.34
CSNK1D-212ENST00000580061 PTPRMP28827 1452 aa23.4■■□□□ 1.34
CSNK1D-212ENST00000580061 SPATA31D1Q6ZQQ2 1576 aa23.39■■□□□ 1.33
CSNK1D-212ENST00000580061 ERVK-7P63135 1459 aa23.38■■□□□ 1.33
CSNK1D-212ENST00000580061 CEBPAP49715 358 aaPredicted RBP23.38■■□□□ 1.33
CSNK1D-212ENST00000580061 NOS1P29475 1434 aa23.37■■□□□ 1.33
CSNK1D-212ENST00000580061 PTPRTO14522 1441 aa23.36■■□□□ 1.33
CSNK1D-212ENST00000580061 FBXO31Q5XUX0 539 aaPredicted RBP23.36■■□□□ 1.33
CSNK1D-212ENST00000580061 PLA2R1Q13018 1463 aa23.35■■□□□ 1.33
CSNK1D-212ENST00000580061 SYNMO15061 1565 aa23.35■■□□□ 1.33
CSNK1D-212ENST00000580061 TRPM2O94759 1503 aa23.34■■□□□ 1.33
CSNK1D-212ENST00000580061 ANKRD30BQ9BXX2 1392 aa23.33■■□□□ 1.33
CSNK1D-212ENST00000580061 PLPPR3Q6T4P5 718 aa23.32■■□□□ 1.32
CSNK1D-212ENST00000580061 PIK3C2BO00750 1634 aa23.3■■□□□ 1.32
CSNK1D-212ENST00000580061 CCER1Q8TC90 406 aaPredicted RBP23.29■■□□□ 1.32
CSNK1D-212ENST00000580061 CLTCL1P53675 1640 aa23.29■■□□□ 1.32
CSNK1D-212ENST00000580061 SETD1BQ9UPS6 1966 aaKnown RBP23.29■■□□□ 1.32
CSNK1D-212ENST00000580061 TNRQ92752 1358 aa23.28■■□□□ 1.32
CSNK1D-212ENST00000580061 UGGT1Q9NYU2 1555 aa23.27■■□□□ 1.32
CSNK1D-212ENST00000580061 MYO3AQ8NEV4 1616 aa23.25■■□□□ 1.31
CSNK1D-212ENST00000580061 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
CSNK1D-212ENST00000580061 CLSPNQ9HAW4 1339 aa23.24■■□□□ 1.31
CSNK1D-212ENST00000580061 KIF1BO60333 1816 aa23.24■■□□□ 1.31
CSNK1D-212ENST00000580061 SLC52A1Q9NWF4 448 aa23.23■■□□□ 1.31
CSNK1D-212ENST00000580061 NLRP1Q9C000 1473 aa23.22■■□□□ 1.31
CSNK1D-212ENST00000580061 IDI1Q13907 227 aa23.21■■□□□ 1.31
CSNK1D-212ENST00000580061 SIN3AQ96ST3 1273 aa23.19■■□□□ 1.3
CSNK1D-212ENST00000580061 ZNF142P52746 1687 aaPredicted RBP23.19■■□□□ 1.3
CSNK1D-212ENST00000580061 MYO5BQ9ULV0 1848 aa23.18■■□□□ 1.3
CSNK1D-212ENST00000580061 KDM5AP29375 1690 aaKnown RBP23.18■■□□□ 1.3
CSNK1D-212ENST00000580061 UBR1Q8IWV7 1749 aa23.17■■□□□ 1.3
CSNK1D-212ENST00000580061 TMEM131LA2VDJ0 1609 aa23.17■■□□□ 1.3
CSNK1D-212ENST00000580061 CEP170BQ9Y4F5 1589 aaPredicted RBP23.16■■□□□ 1.3
CSNK1D-212ENST00000580061 ADGRB3O60242 1522 aa23.16■■□□□ 1.3
CSNK1D-212ENST00000580061 A2ML1A8K2U0 1454 aa23.15■■□□□ 1.3
CSNK1D-212ENST00000580061 NEURL4Q96JN8 1562 aa23.14■■□□□ 1.3
CSNK1D-212ENST00000580061 UHRF1BP1Q6BDS2 1440 aa23.14■■□□□ 1.29
CSNK1D-212ENST00000580061 NEUROD1Q13562 356 aa23.12■■□□□ 1.29
CSNK1D-212ENST00000580061 SPATA31E1Q6ZUB1 1445 aa23.12■■□□□ 1.29
CSNK1D-212ENST00000580061 CHGAP10645 457 aaKnown RBP23.1■■□□□ 1.29
CSNK1D-212ENST00000580061 STAG3Q9UJ98 1225 aa23.08■■□□□ 1.29
CSNK1D-212ENST00000580061 IFT172Q9UG01 1749 aa23.06■■□□□ 1.28
CSNK1D-212ENST00000580061 LMTK3Q96Q04 1460 aa23.05■■□□□ 1.28
CSNK1D-212ENST00000580061 RGL3Q3MIN7 710 aa23.04■■□□□ 1.28
CSNK1D-212ENST00000580061 PPLO60437 1756 aa23.04■■□□□ 1.28
CSNK1D-212ENST00000580061 THEMISQ8N1K5 641 aaPredicted RBP23.03■■□□□ 1.28
CSNK1D-212ENST00000580061 NEXMIFQ5QGS0 1516 aa23.03■■□□□ 1.28
CSNK1D-212ENST00000580061 ZNF326Q5BKZ1 582 aaKnown RBP23.02■■□□□ 1.28
CSNK1D-212ENST00000580061 SLIT1O75093 1534 aa23.02■■□□□ 1.28
CSNK1D-212ENST00000580061 TONSLQ96HA7 1378 aa23.01■■□□□ 1.27
CSNK1D-212ENST00000580061 ARHGAP23Q9P227 1491 aa23■■□□□ 1.27
CSNK1D-212ENST00000580061 TMEM2Q9UHN6 1383 aa23■■□□□ 1.27
CSNK1D-212ENST00000580061 RPGRIP1LQ68CZ1 1315 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms